RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 HIC1Q14526 733 aa17.36■□□□□ 0.37
CLCN6-204ENST00000376491 MFSD10Q14728 455 aa17.36■□□□□ 0.37
CLCN6-204ENST00000376491 GRM4Q14833 912 aa17.36■□□□□ 0.37
CLCN6-204ENST00000376491 PGM5Q15124 567 aa17.36■□□□□ 0.37
CLCN6-204ENST00000376491 KIAA0753Q2KHM9 967 aa17.36■□□□□ 0.37
CLCN6-204ENST00000376491 TRIM71Q2Q1W2 868 aaKnown RBP17.36■□□□□ 0.37
CLCN6-204ENST00000376491 MYSM1Q5VVJ2 828 aa17.36■□□□□ 0.37
CLCN6-204ENST00000376491 TRAF7Q6Q0C0 670 aa17.36■□□□□ 0.37
CLCN6-204ENST00000376491 TMCO2Q7Z6W1 182 aaPredicted RBP17.36■□□□□ 0.37
CLCN6-204ENST00000376491 HOMER1Q86YM7 354 aa17.36■□□□□ 0.37
CLCN6-204ENST00000376491 GPKOWQ92917 476 aaPredicted RBP eCLIP17.36■□□□□ 0.37
CLCN6-204ENST00000376491 PIGSQ96S52 555 aa17.36■□□□□ 0.37
CLCN6-204ENST00000376491 DOCK5Q9H7D0 1870 aa17.35■□□□□ 0.37
CLCN6-204ENST00000376491 KIF28PB7ZC32 967 aa17.35■□□□□ 0.37
CLCN6-204ENST00000376491 CXCL10P02778 98 aa17.35■□□□□ 0.37
CLCN6-204ENST00000376491 DEFB103AP81534 67 aa17.35■□□□□ 0.37
CLCN6-204ENST00000376491 TFF2Q03403 129 aa17.35■□□□□ 0.37
CLCN6-204ENST00000376491 HSDL1Q3SXM5 330 aa17.35■□□□□ 0.37
CLCN6-204ENST00000376491 CELF3Q5SZQ8 465 aaKnown RBP17.35■□□□□ 0.37
CLCN6-204ENST00000376491 C7orf31Q8N865 590 aa17.35■□□□□ 0.37
CLCN6-204ENST00000376491 ARNTL2Q8WYA1 636 aa17.35■□□□□ 0.37
CLCN6-204ENST00000376491 KATNAL1Q9BW62 490 aa17.35■□□□□ 0.37
CLCN6-204ENST00000376491 LCHNA4D1U4 455 aa17.34■□□□□ 0.37
CLCN6-204ENST00000376491 IFIT3O14879 490 aaKnown RBP17.34■□□□□ 0.37
CLCN6-204ENST00000376491 TRANK1O15050 2925 aa17.34■□□□□ 0.37
CLCN6-204ENST00000376491 LPXNO60711 386 aa17.34■□□□□ 0.37
CLCN6-204ENST00000376491 PPFIA4O75335 1185 aa17.34■□□□□ 0.37
CLCN6-204ENST00000376491 GGPS1O95749 300 aa17.34■□□□□ 0.37
CLCN6-204ENST00000376491 BMP1P13497 986 aa17.34■□□□□ 0.37
CLCN6-204ENST00000376491 CHMLP26374 656 aa17.34■□□□□ 0.37
CLCN6-204ENST00000376491 KCNJ6P48051 423 aa17.34■□□□□ 0.37
CLCN6-204ENST00000376491 COL4A4P53420 1690 aaPredicted RBP17.34■□□□□ 0.37
CLCN6-204ENST00000376491 TROAPQ12815 778 aa17.34■□□□□ 0.37
CLCN6-204ENST00000376491 TRDNQ13061 729 aa17.34■□□□□ 0.37
CLCN6-204ENST00000376491 PTK7Q13308 1070 aa17.34■□□□□ 0.37
CLCN6-204ENST00000376491 MBTPS1Q14703 1052 aa17.34■□□□□ 0.37
CLCN6-204ENST00000376491 CNKSR3Q6P9H4 555 aa17.34■□□□□ 0.37
CLCN6-204ENST00000376491 SAMD3Q8N6K7 520 aa17.34■□□□□ 0.37
CLCN6-204ENST00000376491 BCAS3Q9H6U6 928 aa17.34■□□□□ 0.37
CLCN6-204ENST00000376491 GCOM1H8Y6P7 765 aaPredicted RBP17.33■□□□□ 0.36
CLCN6-204ENST00000376491 GTPBP6O43824 516 aaPredicted RBP17.33■□□□□ 0.36
CLCN6-204ENST00000376491 TLL1O43897 1013 aa17.33■□□□□ 0.36
CLCN6-204ENST00000376491 PARNO95453 639 aaKnown RBP17.33■□□□□ 0.36
CLCN6-204ENST00000376491 POLR2MP0CAP2 368 aa17.33■□□□□ 0.36
CLCN6-204ENST00000376491 UBA1P22314 1058 aaKnown RBP17.33■□□□□ 0.36
CLCN6-204ENST00000376491 ZNF618Q5T7W0 954 aa17.33■□□□□ 0.36
CLCN6-204ENST00000376491 KCNV1Q6PIU1 500 aa17.33■□□□□ 0.36
CLCN6-204ENST00000376491 FCHSD1Q86WN1 690 aa17.33■□□□□ 0.36
CLCN6-204ENST00000376491 SPATA33Q96N06 139 aa17.33■□□□□ 0.36
CLCN6-204ENST00000376491 NECAB3Q96P71 396 aaPredicted RBP17.33■□□□□ 0.36
CLCN6-204ENST00000376491 UHRF1Q96T88 793 aaPredicted RBP17.33■□□□□ 0.36
CLCN6-204ENST00000376491 C16orf70Q9BSU1 422 aa17.33■□□□□ 0.36
CLCN6-204ENST00000376491 TSPYL2Q9H2G4 693 aaPredicted RBP17.33■□□□□ 0.36
CLCN6-204ENST00000376491 U3KPZ7 1027 aaPredicted RBP17.33■□□□□ 0.36
CLCN6-204ENST00000376491 MICAL3Q7RTP6 2002 aa17.32■□□□□ 0.36
CLCN6-204ENST00000376491 E7EWF7 191 aa17.32■□□□□ 0.36
CLCN6-204ENST00000376491 KCNQ1P51787 676 aa17.32■□□□□ 0.36
CLCN6-204ENST00000376491 ANTXR2P58335 489 aa17.32■□□□□ 0.36
CLCN6-204ENST00000376491 GRB10Q13322 594 aa17.32■□□□□ 0.36
CLCN6-204ENST00000376491 RUFY2Q8WXA3 655 aa17.32■□□□□ 0.36
CLCN6-204ENST00000376491 PNMA6FA0A0J9YX94 578 aa17.31■□□□□ 0.36
CLCN6-204ENST00000376491 ABHD14A-ACY1A0A1B0GW23 586 aa17.31■□□□□ 0.36
CLCN6-204ENST00000376491 TGFB3P10600 412 aa17.31■□□□□ 0.36
CLCN6-204ENST00000376491 CCND2P30279 289 aa17.31■□□□□ 0.36
CLCN6-204ENST00000376491 MRPS9P82933 396 aaKnown RBP17.31■□□□□ 0.36
CLCN6-204ENST00000376491 WTAPQ15007 396 aa17.31■□□□□ 0.36
CLCN6-204ENST00000376491 SKIV2LQ15477 1246 aaKnown RBP17.31■□□□□ 0.36
CLCN6-204ENST00000376491 NCOA7Q8NI08 942 aa17.31■□□□□ 0.36
CLCN6-204ENST00000376491 SUPT16HQ9Y5B9 1047 aaKnown RBP17.31■□□□□ 0.36
CLCN6-204ENST00000376491 BRWD1Q9NSI6 2320 aa17.31■□□□□ 0.36
CLCN6-204ENST00000376491 FRMPD4Q14CM0 1322 aa17.3■□□□□ 0.36
CLCN6-204ENST00000376491 ERICH2A1L162 156 aa17.3■□□□□ 0.36
CLCN6-204ENST00000376491 SGSM2O43147 1006 aa17.3■□□□□ 0.36
CLCN6-204ENST00000376491 GJB5O95377 273 aa17.3■□□□□ 0.36
CLCN6-204ENST00000376491 SEMA3FQ13275 785 aa17.3■□□□□ 0.36
CLCN6-204ENST00000376491 RALYLQ86SE5 291 aaKnown RBP17.3■□□□□ 0.36
CLCN6-204ENST00000376491 SERINC5Q86VE9 423 aa17.3■□□□□ 0.36
CLCN6-204ENST00000376491 IL27Q8NEV9 243 aa17.3■□□□□ 0.36
CLCN6-204ENST00000376491 IGDCC4Q8TDY8 1250 aa17.3■□□□□ 0.36
CLCN6-204ENST00000376491 PIBF1Q8WXW3 757 aa17.3■□□□□ 0.36
CLCN6-204ENST00000376491 MLXIPQ9HAP2 919 aa17.3■□□□□ 0.36
CLCN6-204ENST00000376491 SIP14410 1827 aa17.3■□□□□ 0.36
CLCN6-204ENST00000376491 HOXC8P31273 242 aa17.29■□□□□ 0.36
CLCN6-204ENST00000376491 TRAF1Q13077 416 aa17.29■□□□□ 0.36
CLCN6-204ENST00000376491 MKRN4PQ13434 485 aaPredicted RBP17.29■□□□□ 0.36
CLCN6-204ENST00000376491 IKBKEQ14164 716 aa17.29■□□□□ 0.36
CLCN6-204ENST00000376491 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.29■□□□□ 0.36
CLCN6-204ENST00000376491 MB21D2Q8IYB1 491 aaPredicted RBP17.29■□□□□ 0.36
CLCN6-204ENST00000376491 ZBED2Q9BTP6 218 aa17.29■□□□□ 0.36
CLCN6-204ENST00000376491 TELO2Q9Y4R8 837 aa17.29■□□□□ 0.36
CLCN6-204ENST00000376491 XIRP2A4UGR9 3374 aa17.29■□□□□ 0.36
CLCN6-204ENST00000376491 KAT6AQ92794 2004 aa17.28■□□□□ 0.36
CLCN6-204ENST00000376491 H3BRB1 525 aa17.28■□□□□ 0.36
CLCN6-204ENST00000376491 LGR5O75473 907 aa17.28■□□□□ 0.36
CLCN6-204ENST00000376491 LGALS2P05162 132 aa17.28■□□□□ 0.36
CLCN6-204ENST00000376491 ICAM3P32942 547 aa17.28■□□□□ 0.36
CLCN6-204ENST00000376491 FAM117BQ6P1L5 589 aa17.28■□□□□ 0.36
CLCN6-204ENST00000376491 DBF4BQ8NFT6 615 aa17.28■□□□□ 0.36
CLCN6-204ENST00000376491 GDPD5Q8WTR4 605 aa17.28■□□□□ 0.36
CLCN6-204ENST00000376491 MAP4K1Q92918 833 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms