RNA–Protein interactions for RNA: ENST00000375669.7

TUBGCP3-202, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-202ENST00000375669 TFCP2L1Q9NZI6 479 aa19.79■□□□□ 0.76
TUBGCP3-202ENST00000375669 PCDHA6Q9UN73 950 aa19.79■□□□□ 0.76
TUBGCP3-202ENST00000375669 PCDHA8Q9Y5H6 950 aa19.79■□□□□ 0.76
TUBGCP3-202ENST00000375669 CCNT1O60563 726 aaKnown RBP19.78■□□□□ 0.76
TUBGCP3-202ENST00000375669 GCKP35557 465 aa19.78■□□□□ 0.76
TUBGCP3-202ENST00000375669 SLC1A4P43007 532 aa19.78■□□□□ 0.76
TUBGCP3-202ENST00000375669 CDK17Q00537 523 aa19.78■□□□□ 0.76
TUBGCP3-202ENST00000375669 CCDC24Q8N4L8 307 aa19.78■□□□□ 0.76
TUBGCP3-202ENST00000375669 KIAA0895Q8NCT3 520 aa19.78■□□□□ 0.76
TUBGCP3-202ENST00000375669 TRIM9Q9C026 710 aa19.78■□□□□ 0.76
TUBGCP3-202ENST00000375669 GOLPH3Q9H4A6 298 aa19.78■□□□□ 0.76
TUBGCP3-202ENST00000375669 PLAAQ9Y263 795 aa19.78■□□□□ 0.76
TUBGCP3-202ENST00000375669 SLIT2O94813 1529 aa19.78■□□□□ 0.76
TUBGCP3-202ENST00000375669 GOLGA6L10A6NI86 522 aa19.78■□□□□ 0.76
TUBGCP3-202ENST00000375669 DNAJC8O75937 253 aaPredicted RBP19.78■□□□□ 0.76
TUBGCP3-202ENST00000375669 ATP6V1G2O95670 118 aa19.78■□□□□ 0.76
TUBGCP3-202ENST00000375669 PRDX5P30044 214 aa19.78■□□□□ 0.76
TUBGCP3-202ENST00000375669 CACNA2D3Q8IZS8 1091 aa19.78■□□□□ 0.76
TUBGCP3-202ENST00000375669 BATF3Q9NR55 127 aa19.78■□□□□ 0.76
TUBGCP3-202ENST00000375669 KLHL33A6NCF5 533 aa19.77■□□□□ 0.76
TUBGCP3-202ENST00000375669 ATP2C2O75185 946 aa19.77■□□□□ 0.76
TUBGCP3-202ENST00000375669 CALM1P0DP23 149 aa19.77■□□□□ 0.76
TUBGCP3-202ENST00000375669 CALM2P0DP24 149 aa19.77■□□□□ 0.76
TUBGCP3-202ENST00000375669 CALM3P0DP25 149 aa19.77■□□□□ 0.76
TUBGCP3-202ENST00000375669 TDRD12Q587J7 1177 aaKnown RBP19.77■□□□□ 0.76
TUBGCP3-202ENST00000375669 CABP7Q86V35 215 aa19.77■□□□□ 0.76
TUBGCP3-202ENST00000375669 WHAMMQ8TF30 809 aa19.77■□□□□ 0.76
TUBGCP3-202ENST00000375669 TLR10Q9BXR5 811 aa19.77■□□□□ 0.76
TUBGCP3-202ENST00000375669 TANGO6Q9C0B7 1094 aa19.77■□□□□ 0.76
TUBGCP3-202ENST00000375669 NOD2Q9HC29 1040 aa19.77■□□□□ 0.76
TUBGCP3-202ENST00000375669 VAT1LQ9HCJ6 419 aa19.77■□□□□ 0.76
TUBGCP3-202ENST00000375669 NIP7Q9Y221 180 aaKnown RBP eCLIP19.77■□□□□ 0.76
TUBGCP3-202ENST00000375669 COL1A1P02452 1464 aaPredicted RBP19.77■□□□□ 0.76
TUBGCP3-202ENST00000375669 DDAH1O94760 285 aa19.77■□□□□ 0.76
TUBGCP3-202ENST00000375669 MAGEA1P43355 309 aa19.77■□□□□ 0.76
TUBGCP3-202ENST00000375669 ELF3P78545 371 aaPredicted RBP19.77■□□□□ 0.76
TUBGCP3-202ENST00000375669 TFAP4Q01664 338 aa19.77■□□□□ 0.76
TUBGCP3-202ENST00000375669 BYSLQ13895 437 aaKnown RBP19.77■□□□□ 0.76
TUBGCP3-202ENST00000375669 ARL6IP4Q66PJ3 421 aaKnown RBP19.77■□□□□ 0.76
TUBGCP3-202ENST00000375669 SLC51AQ86UW1 340 aa19.77■□□□□ 0.76
TUBGCP3-202ENST00000375669 SLC44A5Q8NCS7 719 aa19.77■□□□□ 0.76
TUBGCP3-202ENST00000375669 P3H4Q92791 437 aa19.77■□□□□ 0.76
TUBGCP3-202ENST00000375669 DCP1AQ9NPI6 582 aaPredicted RBP19.77■□□□□ 0.76
TUBGCP3-202ENST00000375669 PCDHA4Q9UN74 947 aa19.77■□□□□ 0.76
TUBGCP3-202ENST00000375669 UBR2Q8IWV8 1755 aa19.77■□□□□ 0.75
TUBGCP3-202ENST00000375669 CYTH3O43739 400 aa19.76■□□□□ 0.75
TUBGCP3-202ENST00000375669 CCNE1P24864 410 aa19.76■□□□□ 0.75
TUBGCP3-202ENST00000375669 TRAPPC10P48553 1259 aa19.76■□□□□ 0.75
TUBGCP3-202ENST00000375669 CDC37Q16543 378 aaPredicted RBP19.76■□□□□ 0.75
TUBGCP3-202ENST00000375669 CFAP221Q4G0U5 840 aa19.76■□□□□ 0.75
TUBGCP3-202ENST00000375669 TBC1D31Q96DN5 1066 aa19.76■□□□□ 0.75
TUBGCP3-202ENST00000375669 MCM9Q9NXL9 1143 aa19.76■□□□□ 0.75
TUBGCP3-202ENST00000375669 SLC12A6Q9UHW9 1150 aa19.76■□□□□ 0.75
TUBGCP3-202ENST00000375669 C5orf60A6NFR6 353 aa19.76■□□□□ 0.75
TUBGCP3-202ENST00000375669 MSL1Q68DK7 614 aa19.76■□□□□ 0.75
TUBGCP3-202ENST00000375669 OR2W6PQ8NHA6 318 aa19.76■□□□□ 0.75
TUBGCP3-202ENST00000375669 CASKIN2Q8WXE0 1202 aa19.76■□□□□ 0.75
TUBGCP3-202ENST00000375669 CUL5Q93034 780 aa19.76■□□□□ 0.75
TUBGCP3-202ENST00000375669 HVCN1Q96D96 273 aa19.76■□□□□ 0.75
TUBGCP3-202ENST00000375669 MTA3Q9BTC8 594 aa19.76■□□□□ 0.75
TUBGCP3-202ENST00000375669 STX8Q9UNK0 236 aa19.76■□□□□ 0.75
TUBGCP3-202ENST00000375669 PLAGL2Q9UPG8 496 aa19.76■□□□□ 0.75
TUBGCP3-202ENST00000375669 MECOMQ03112 1051 aa19.75■□□□□ 0.75
TUBGCP3-202ENST00000375669 CCDC152Q4G0S7 254 aa19.75■□□□□ 0.75
TUBGCP3-202ENST00000375669 GJA10Q969M2 543 aa19.75■□□□□ 0.75
TUBGCP3-202ENST00000375669 SPDL1Q96EA4 605 aa19.75■□□□□ 0.75
TUBGCP3-202ENST00000375669 NDST4Q9H3R1 872 aa19.75■□□□□ 0.75
TUBGCP3-202ENST00000375669 IL17RBQ9NRM6 502 aa19.75■□□□□ 0.75
TUBGCP3-202ENST00000375669 SPATS2LQ9NUQ6 558 aaKnown RBP19.75■□□□□ 0.75
TUBGCP3-202ENST00000375669 ADAMTSL3P82987 1691 aa19.75■□□□□ 0.75
TUBGCP3-202ENST00000375669 GCOM1H8Y6P7 765 aaPredicted RBP19.75■□□□□ 0.75
TUBGCP3-202ENST00000375669 MYZAPP0CAP1 466 aa19.75■□□□□ 0.75
TUBGCP3-202ENST00000375669 GHRP10912 638 aa19.75■□□□□ 0.75
TUBGCP3-202ENST00000375669 KCNB1Q14721 858 aa19.75■□□□□ 0.75
TUBGCP3-202ENST00000375669 BICDL1Q6ZP65 573 aa19.75■□□□□ 0.75
TUBGCP3-202ENST00000375669 PNMA1Q8ND90 353 aa19.75■□□□□ 0.75
TUBGCP3-202ENST00000375669 CCT6BQ92526 530 aa19.75■□□□□ 0.75
TUBGCP3-202ENST00000375669 KRT12Q99456 494 aa19.75■□□□□ 0.75
TUBGCP3-202ENST00000375669 KDM4CQ9H3R0 1056 aa19.75■□□□□ 0.75
TUBGCP3-202ENST00000375669 EBF2Q9HAK2 575 aa19.75■□□□□ 0.75
TUBGCP3-202ENST00000375669 BAIAP2L1Q9UHR4 511 aa19.75■□□□□ 0.75
TUBGCP3-202ENST00000375669 COL4A1P02462 1669 aa19.75■□□□□ 0.75
TUBGCP3-202ENST00000375669 TIAM2Q8IVF5 1701 aa19.75■□□□□ 0.75
TUBGCP3-202ENST00000375669 BUB1BO60566 1050 aaPredicted RBP19.75■□□□□ 0.75
TUBGCP3-202ENST00000375669 HSPA9P38646 679 aaKnown RBP19.75■□□□□ 0.75
TUBGCP3-202ENST00000375669 ICA1Q05084 483 aa19.75■□□□□ 0.75
TUBGCP3-202ENST00000375669 KLHL7Q8IXQ5 586 aa19.75■□□□□ 0.75
TUBGCP3-202ENST00000375669 NSMCE1Q8WV22 266 aa19.75■□□□□ 0.75
TUBGCP3-202ENST00000375669 KIF9Q9HAQ2 790 aa19.75■□□□□ 0.75
TUBGCP3-202ENST00000375669 TMOD1P28289 359 aa19.74■□□□□ 0.75
TUBGCP3-202ENST00000375669 TXKP42681 527 aa19.74■□□□□ 0.75
TUBGCP3-202ENST00000375669 KLHDC7AQ5VTJ3 777 aa19.74■□□□□ 0.75
TUBGCP3-202ENST00000375669 LRIG3Q6UXM1 1119 aa19.74■□□□□ 0.75
TUBGCP3-202ENST00000375669 ARMC9Q7Z3E5 817 aa19.74■□□□□ 0.75
TUBGCP3-202ENST00000375669 LMBR1Q8WVP7 490 aa19.74■□□□□ 0.75
TUBGCP3-202ENST00000375669 STAMBPL1Q96FJ0 436 aa19.74■□□□□ 0.75
TUBGCP3-202ENST00000375669 PYM1Q9BRP8 204 aaKnown RBP19.74■□□□□ 0.75
TUBGCP3-202ENST00000375669 PLCB1Q9NQ66 1216 aa19.74■□□□□ 0.75
TUBGCP3-202ENST00000375669 EME2A4GXA9 379 aaPredicted RBP19.74■□□□□ 0.75
TUBGCP3-202ENST00000375669 DHTKD1Q96HY7 919 aaPredicted RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms