RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 CKAP2LQ8IYA6 745 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 PARD3BQ8TEW8 1205 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 YIPF2Q9BWQ6 316 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 TSPY26PQ9H489 355 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.12□□□□□ -1.75
UFM1-201ENST00000239878 HOMER2Q9NSB8 354 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 ATP8A2Q9NTI2 1148 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 LMCD1Q9NZU5 365 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 SYNPO2Q9UMS6 1093 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 KCNH4Q9UQ05 1017 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 SGSM2O43147 1006 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 PPFIA2O75334 1257 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 BPNT1O95861 308 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 LDHCP07864 332 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 MPSTP25325 297 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 ELF1P32519 619 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 ETFBP38117 255 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 SEC13P55735 322 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 SETDB1Q15047 1291 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 SLC9C2Q5TAH2 1124 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 C12orf60Q5U649 245 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.12□□□□□ -1.75
UFM1-201ENST00000239878 ERMP1Q7Z2K6 904 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 MSL3Q8N5Y2 521 aaKnown RBP4.12□□□□□ -1.75
UFM1-201ENST00000239878 DMRTB1Q96MA1 342 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 DEPDC7Q96QD5 511 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 SRPK1Q96SB4 655 aaKnown RBP4.12□□□□□ -1.75
UFM1-201ENST00000239878 DSCC1Q9BVC3 393 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 TMEM39BQ9GZU3 492 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 LSG1Q9H089 658 aaKnown RBP4.12□□□□□ -1.75
UFM1-201ENST00000239878 AK5Q9Y6K8 562 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 MAGEB6P1A0A0J9YX57 407 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 H2AFXP16104 143 aaPredicted RBP4.12□□□□□ -1.75
UFM1-201ENST00000239878 GNAT2P19087 354 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 CYP7A1P22680 504 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 PBX2P40425 430 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 LMAN1P49257 510 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 TRAF1Q13077 416 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 NMIQ13287 307 aaPredicted RBP4.12□□□□□ -1.75
UFM1-201ENST00000239878 TNFAIP1Q13829 316 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 ZRSR2Q15696 482 aaKnown RBP4.12□□□□□ -1.75
UFM1-201ENST00000239878 ZSCAN25Q6NSZ9 544 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 DZIP1Q86YF9 867 aaKnown RBP4.12□□□□□ -1.75
UFM1-201ENST00000239878 SIAH1Q8IUQ4 282 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 TEX11Q8IYF3 940 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 ARL10Q8N8L6 244 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 GPRASP2Q96D09 838 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 FAM227BQ96M60 508 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 UBXN6Q9BZV1 441 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 DHX36Q9H2U1 1008 aaKnown RBP4.12□□□□□ -1.75
UFM1-201ENST00000239878 TMEM165Q9HC07 324 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 USP40Q9NVE5 1235 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 HERC5Q9UII4 1024 aaKnown RBP4.12□□□□□ -1.75
UFM1-201ENST00000239878 BLOC1S6Q9UL45 172 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 NOD1Q9Y239 953 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 BOLA1Q9Y3E2 137 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 PCDHGA11Q9Y5H2 935 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 LCTP09848 1927 aa4.12□□□□□ -1.75
UFM1-201ENST00000239878 CCDC171Q6TFL3 1326 aa4.11□□□□□ -1.75
UFM1-201ENST00000239878 SMIM22K7EJ46 135 aa4.11□□□□□ -1.75
UFM1-201ENST00000239878 GPAA1O43292 621 aa4.11□□□□□ -1.75
UFM1-201ENST00000239878 PRKAB2O43741 272 aa4.11□□□□□ -1.75
UFM1-201ENST00000239878 SKAP2O75563 359 aaPredicted RBP4.11□□□□□ -1.75
UFM1-201ENST00000239878 MBD4O95243 580 aa4.11□□□□□ -1.75
UFM1-201ENST00000239878 OAS2P29728 719 aaKnown RBP4.11□□□□□ -1.75
UFM1-201ENST00000239878 HNRNPH1P31943 449 aaKnown RBP4.11□□□□□ -1.75
UFM1-201ENST00000239878 ACTN2P35609 894 aa4.11□□□□□ -1.75
UFM1-201ENST00000239878 TPM4P67936 248 aa4.11□□□□□ -1.75
UFM1-201ENST00000239878 NUCB2P80303 420 aa4.11□□□□□ -1.75
UFM1-201ENST00000239878 SLC5A9Q2M3M2 681 aa4.11□□□□□ -1.75
UFM1-201ENST00000239878 EML3Q32P44 896 aa4.11□□□□□ -1.75
UFM1-201ENST00000239878 NBPF12Q5TAG4 269 aaPredicted RBP4.11□□□□□ -1.75
UFM1-201ENST00000239878 SPC24Q8NBT2 197 aa4.11□□□□□ -1.75
UFM1-201ENST00000239878 LRRN4CLQ8ND94 238 aa4.11□□□□□ -1.75
UFM1-201ENST00000239878 GIMAP7Q8NHV1 300 aa4.11□□□□□ -1.75
UFM1-201ENST00000239878 TPCN2Q8NHX9 752 aa4.11□□□□□ -1.75
UFM1-201ENST00000239878 N4BP2L2Q92802 583 aaPredicted RBP4.11□□□□□ -1.75
UFM1-201ENST00000239878 C12orf42Q96LP6 360 aa4.11□□□□□ -1.75
UFM1-201ENST00000239878 SEC62Q99442 399 aaKnown RBP4.11□□□□□ -1.75
UFM1-201ENST00000239878 SH3GL3Q99963 347 aa4.11□□□□□ -1.75
UFM1-201ENST00000239878 JPH2Q9BR39 696 aaPredicted RBP4.11□□□□□ -1.75
UFM1-201ENST00000239878 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.11□□□□□ -1.75
UFM1-201ENST00000239878 CLRN2A0PK11 232 aa4.11□□□□□ -1.75
UFM1-201ENST00000239878 ZBTB24O43167 697 aaPredicted RBP4.11□□□□□ -1.75
UFM1-201ENST00000239878 NRDCO43847 1150 aa4.11□□□□□ -1.75
UFM1-201ENST00000239878 ORC4O43929 436 aa4.11□□□□□ -1.75
UFM1-201ENST00000239878 RTN2O75298 545 aa4.11□□□□□ -1.75
UFM1-201ENST00000239878 FAM13AO94988 1023 aa4.11□□□□□ -1.75
UFM1-201ENST00000239878 HSPD1P10809 573 aaKnown RBP4.11□□□□□ -1.75
UFM1-201ENST00000239878 GCFC2P16383 781 aaKnown RBP4.11□□□□□ -1.75
UFM1-201ENST00000239878 PLCD1P51178 756 aa4.11□□□□□ -1.75
UFM1-201ENST00000239878 CACNB3P54284 484 aa4.11□□□□□ -1.75
UFM1-201ENST00000239878 RWDD2BP57060 319 aa4.11□□□□□ -1.75
UFM1-201ENST00000239878 USP4Q13107 963 aa4.11□□□□□ -1.75
UFM1-201ENST00000239878 MAP7D1Q3KQU3 841 aa4.11□□□□□ -1.75
UFM1-201ENST00000239878 MCMDC2Q4G0Z9 681 aa4.11□□□□□ -1.75
UFM1-201ENST00000239878 INO80DQ53TQ3 878 aaPredicted RBP4.11□□□□□ -1.75
UFM1-201ENST00000239878 VPS53Q5VIR6 699 aa4.11□□□□□ -1.75
UFM1-201ENST00000239878 POTEEQ6S8J3 1075 aa4.11□□□□□ -1.75
UFM1-201ENST00000239878 GET4Q7L5D6 327 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms