RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Tmem132bF7BAB2 1078 aa11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Akr1b10G5E895 316 aa11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Ppef2O35385 757 aa11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Ano9P86044 747 aa11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 GclcP97494 637 aa11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 EgfrQ01279 1210 aa11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Aak1Q3UHJ0 959 aa11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Tmed1Q3V009 227 aa11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Hif1aQ61221 836 aaKnown RBP11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Npdc1Q64322 332 aa11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Skor1Q8BX46 964 aa11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Shtn1Q8K2Q9 631 aa11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 OscarQ8VBT3 265 aa11.86□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Zswim8Q3UHH1 1832 aaKnown RBP11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Ambra1A2AH22 1300 aa11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Prl2c2P04095 224 aa11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Tmem35bQ3U0Y2 150 aa11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Ccdc33Q3ULW6 985 aa11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Myo19Q5SV80 963 aa11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Klra8Q60682 266 aa11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Exoc3Q6KAR6 755 aa11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Stap2Q8R0L1 411 aa11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Uba5Q8VE47 403 aa11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Stx17Q9D0I4 301 aa11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Q9D1Z2 194 aa11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Sf3a3Q9D554 501 aaKnown RBP11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Paip2Q9D6V8 124 aa11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Mrpl12Q9DB15 201 aaKnown RBP11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Snx1Q9WV80 522 aa11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Rbbp6P97868 1790 aaKnown RBP11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Gm28510A0A087WP28 240 aa11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 DgkiD3YWQ0 1071 aa11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 PurbO35295 324 aaKnown RBP11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Nat3P50296 290 aa11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Alox12eP55249 662 aa11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 HmmrQ00547 794 aaKnown RBP11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Slc9a2Q3ZAS0 814 aa11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Ccdc157Q5SPX1 718 aa11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Kif11Q6P9P6 1052 aa11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Mtss1lQ6P9S0 715 aa11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Rassf10Q8BL43 508 aa11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Slc9b1Q8C0X2 565 aa11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Ccdc186Q8C9S4 917 aa11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Mettl5Q8K1A0 209 aa11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Ascc1Q9D8Z1 356 aaKnown RBP11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Psma7Q9Z2U0 248 aa11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Homer1Q9Z2Y3 366 aa11.85□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Tex13cD3YU32 604 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Mcm5P49718 733 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Actn4P57780 912 aaKnown RBP11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Scg2Q03517 617 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Pla2g4eQ50L42 875 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Znf280dQ68FE8 974 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Ndufv1Q91YT0 464 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Dynll2Q9D0M5 89 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 UvssaQ9D479 717 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Cd2apQ9JLQ0 637 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Nr2e3Q9QXZ7 395 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Herc3A6H6S0 1050 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Apol6B7ZC55 329 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Ptpn12P35831 775 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 E2f5Q61502 335 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Mpp4Q6P7F1 635 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Gpr101Q80T62 511 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Tcp10aQ80W76 438 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Ppme1Q8BVQ5 386 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Dclk3Q8BWQ5 790 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Ppm1fQ8CGA0 452 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Trim42Q9D2H5 723 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Capn15Q9JLG8 1095 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Sel1lQ9Z2G6 790 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Pnpla6Q3TRM4 1355 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Samd15F6XZJ7 620 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Csf1rP09581 977 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Terf1P70371 421 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Rnpc3Q3UZ01 514 aaKnown RBP11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Esyt3Q5DTI8 891 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 ErfeQ6PGN1 340 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Ublcp1Q8BGR9 318 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Rassf2Q8BMS9 326 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 IarsQ8BU30 1262 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Rnf34Q99KR6 376 aa11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Mmtag2Q99LX5 260 aaKnown RBP11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Ddx47Q9CWX9 455 aaKnown RBP11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Rpf2Q9JJ80 306 aaKnown RBP11.84□□□□□ -0.51
Prpf40b-202ENSMUST00000118287 Ttc13A0A1L1SSC7 844 aa11.83□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Taf4bG5E8Z2 855 aa11.83□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Pip4k2aO70172 405 aa11.83□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Bend4P86174 541 aa11.83□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 HelqQ2VPA6 1069 aa11.83□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Shc3Q61120 474 aa11.83□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Krt74Q6IFZ9 495 aa11.83□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Maip1Q8BHE8 291 aa11.83□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Klhl7Q8BUL5 586 aa11.83□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Prl7b1Q8CGZ9 251 aa11.83□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Lrrc41Q8K1C9 807 aa11.83□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Cabp7Q91ZM8 215 aa11.83□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Fsip1Q9D3V5 435 aa11.83□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Calr3Q9D9Q6 380 aa11.83□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Acot3Q9QYR7 432 aa11.83□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms