RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 KTR5P53966 522 aaPredicted RBP2.32□□□□□ -2.04
snR54snR54 FIN1Q03898 291 aa2.32□□□□□ -2.04
snR54snR54 YPL199CQ08954 240 aa2.32□□□□□ -2.04
snR54snR54 YLR108CQ12259 485 aa2.32□□□□□ -2.04
snR54snR54 AVL9Q12500 764 aa2.32□□□□□ -2.04
snR54snR54 SEM1O94742 89 aa2.31□□□□□ -2.04
snR54snR54 PEP3P27801 918 aa2.31□□□□□ -2.04
snR54snR54 CRM1P30822 1084 aaKnown RBP2.31□□□□□ -2.04
snR54snR54 MIX23P38162 196 aa2.31□□□□□ -2.04
snR54snR54 NCA3P46955 337 aa2.31□□□□□ -2.04
snR54snR54 PET130P47065 347 aa2.31□□□□□ -2.04
snR54snR54 OCA1P50946 238 aaPredicted RBP2.31□□□□□ -2.04
snR54snR54 YGR066CP53242 292 aa2.31□□□□□ -2.04
snR54snR54 OGG1P53397 376 aaPredicted RBP2.31□□□□□ -2.04
snR54snR54 IBD2P53892 351 aa2.31□□□□□ -2.04
snR54snR54 ODC1Q03028 310 aa2.31□□□□□ -2.04
snR54snR54 YDR056CQ12025 205 aa2.31□□□□□ -2.04
snR54snR54 RCN2Q12044 265 aa2.31□□□□□ -2.04
snR54snR54 RRD2Q12461 358 aa2.31□□□□□ -2.04
snR54snR54 ENT1Q12518 454 aa2.31□□□□□ -2.04
snR54snR54 BRR1Q99177 341 aaPredicted RBP2.31□□□□□ -2.04
snR54snR54 SUP35P05453 685 aaKnown RBP2.3□□□□□ -2.04
snR54snR54 LEU4P06208 619 aaKnown RBP2.3□□□□□ -2.04
snR54snR54 YAR066WP0CX18 203 aa2.3□□□□□ -2.04
snR54snR54 YHR214WP0CX19 203 aa2.3□□□□□ -2.04
snR54snR54 PET123P17558 318 aa2.3□□□□□ -2.04
snR54snR54 RVS161P25343 265 aaKnown RBP2.3□□□□□ -2.04
snR54snR54 SDH3P33421 198 aa2.3□□□□□ -2.04
snR54snR54 PRM5P40476 318 aa2.3□□□□□ -2.04
snR54snR54 YDL007C-AQ2V2Q0 85 aa2.3□□□□□ -2.04
snR54snR54 RPL31BP0C2H9 113 aaKnown RBP2.29□□□□□ -2.04
snR54snR54 NAT1P12945 854 aaKnown RBP2.29□□□□□ -2.04
snR54snR54 OLE1P21147 510 aaKnown RBP2.29□□□□□ -2.04
snR54snR54 YCR041WP37265 110 aa2.29□□□□□ -2.04
snR54snR54 NOP16P40007 231 aaKnown RBP2.29□□□□□ -2.04
snR54snR54 PAN6P40459 309 aa2.29□□□□□ -2.04
snR54snR54 URB2P47108 1174 aa2.29□□□□□ -2.04
snR54snR54 PDS5Q04264 1277 aa2.29□□□□□ -2.04
snR54snR54 HRI1Q05905 244 aaKnown RBP2.29□□□□□ -2.04
snR54snR54 RPS8AP0CX39 200 aaKnown RBP2.28□□□□□ -2.04
snR54snR54 RPS8BP0CX40 200 aaKnown RBP2.28□□□□□ -2.04
snR54snR54 PRS1P32895 427 aaKnown RBP2.28□□□□□ -2.04
snR54snR54 STB6P36085 766 aa2.28□□□□□ -2.04
snR54snR54 CBP4P37267 147 aa2.28□□□□□ -2.04
snR54snR54 YBR225WP38321 900 aa2.28□□□□□ -2.04
snR54snR54 MSG5P38590 489 aa2.28□□□□□ -2.04
snR54snR54 YGL108CP53139 140 aa2.28□□□□□ -2.04
snR54snR54 VPS75P53853 264 aa2.28□□□□□ -2.04
snR54snR54 PNG1Q02890 363 aa2.28□□□□□ -2.04
snR54snR54 MRP51Q02950 344 aa2.28□□□□□ -2.04
snR54snR54 DFR1P07807 211 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
snR54snR54 PCL1P24867 279 aa2.27□□□□□ -2.05
snR54snR54 DAL2P25335 343 aa2.27□□□□□ -2.05
snR54snR54 DPB3P27344 201 aa2.27□□□□□ -2.05
snR54snR54 MRE11P32829 692 aa2.27□□□□□ -2.05
snR54snR54 UTH1P36135 365 aa2.27□□□□□ -2.05
snR54snR54 THI2P38141 450 aa2.27□□□□□ -2.05
snR54snR54 MST28P39552 234 aa2.27□□□□□ -2.05
snR54snR54 YEL057CP39983 233 aa2.27□□□□□ -2.05
snR54snR54 VID27P40157 782 aa2.27□□□□□ -2.05
snR54snR54 TMA108P40462 946 aa2.27□□□□□ -2.05
snR54snR54 PCP1P53259 346 aa2.27□□□□□ -2.05
snR54snR54 HXT11P54862 567 aa2.27□□□□□ -2.05
snR54snR54 SOV1Q04748 898 aa2.27□□□□□ -2.05
snR54snR54 FOB1O13329 566 aa2.26□□□□□ -2.05
snR54snR54 ATP10P18496 279 aa2.26□□□□□ -2.05
snR54snR54 NOP4P37838 685 aaKnown RBP2.26□□□□□ -2.05
snR54snR54 RIB5P38145 238 aa2.26□□□□□ -2.05
snR54snR54 CST26P38226 397 aa2.26□□□□□ -2.05
snR54snR54 LAM5P43560 674 aa2.26□□□□□ -2.05
snR54snR54 YIP1P53039 248 aa2.26□□□□□ -2.05
snR54snR54 SHY1P53266 389 aa2.26□□□□□ -2.05
snR54snR54 APJ1P53940 528 aa2.26□□□□□ -2.05
snR54snR54 YDR239CQ03780 787 aa2.26□□□□□ -2.05
snR54snR54 RAD61Q99359 647 aa2.26□□□□□ -2.05
snR54snR54 YML133CQ03099 1374 aa2.25□□□□□ -2.05
snR54snR54 YLL067CQ07888 1374 aa2.25□□□□□ -2.05
snR54snR54 YLL066CQ99208 1374 aa2.25□□□□□ -2.05
snR54snR54 TRP1P00912 224 aa2.25□□□□□ -2.05
snR54snR54 SPS22P25380 463 aa2.25□□□□□ -2.05
snR54snR54 ITR1P30605 584 aa2.25□□□□□ -2.05
snR54snR54 YBR137WP38276 179 aa2.25□□□□□ -2.05
snR54snR54 MET28P40573 187 aa2.25□□□□□ -2.05
snR54snR54 ARE2P53629 642 aaKnown RBP2.25□□□□□ -2.05
snR54snR54 TSA2Q04120 196 aa2.25□□□□□ -2.05
snR54snR54 TAP42Q04372 366 aa2.25□□□□□ -2.05
snR54snR54 YPR022CQ12139 1133 aa2.25□□□□□ -2.05
snR54snR54 WTM1Q12363 437 aaKnown RBP2.25□□□□□ -2.05
snR54snR54 YDL012CQ12489 107 aa2.25□□□□□ -2.05
snR54snR54 SEC39Q12745 709 aa2.25□□□□□ -2.05
snR54snR54 LSB5P25369 354 aa2.24□□□□□ -2.05
snR54snR54 SPB1P25582 841 aaPredicted RBP2.24□□□□□ -2.05
snR54snR54 TIP1P27654 210 aaPredicted RBP2.24□□□□□ -2.05
snR54snR54 AFG1P32317 509 aa2.24□□□□□ -2.05
snR54snR54 YHR131CP38835 850 aa2.24□□□□□ -2.05
snR54snR54 HAL1Q01766 294 aa2.24□□□□□ -2.05
snR54snR54 HER2Q03557 464 aa2.24□□□□□ -2.05
snR54snR54 PPM1Q04081 328 aa2.24□□□□□ -2.05
snR54snR54 YMR027WQ04371 470 aa2.24□□□□□ -2.05
snR54snR54 MRD1Q06106 887 aaKnown RBP2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms