RNA–Protein interactions for RNA: snR46

snR46, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR46, Length 197 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR46	snR46	DTR1	P38125	572 aa		0.69	□□□□□ -2.3
snR46	snR46	MAL33	P38157	468 aa		0.69	□□□□□ -2.3
snR46	snR46	REG2	P38232	338 aa		0.69	□□□□□ -2.3
snR46	snR46	YER184C	P39961	794 aa		0.69	□□□□□ -2.3
snR46	snR46	LYS4	P49367	693 aa	Predicted RBP	0.69	□□□□□ -2.3
snR46	snR46	PDS5	Q04264	1277 aa		0.69	□□□□□ -2.3
snR46	snR46	BUD22	Q04347	519 aa	Known RBP	0.69	□□□□□ -2.3
snR46	snR46	BLS1	Q06071	122 aa		0.69	□□□□□ -2.3
snR46	snR46	MCH1	Q07376	486 aa		0.69	□□□□□ -2.3
snR46	snR46	NBP2	Q12163	236 aa		0.69	□□□□□ -2.3
snR46	snR46	IZH2	Q12442	317 aa		0.69	□□□□□ -2.3
snR46	snR46	BRR1	Q99177	341 aa	Predicted RBP	0.69	□□□□□ -2.3
snR46	snR46	TOP1	P04786	769 aa		0.68	□□□□□ -2.3
snR46	snR46	ART10	P18634	518 aa	Known RBP	0.68	□□□□□ -2.3
snR46	snR46	SLY1	P22213	666 aa		0.68	□□□□□ -2.3
snR46	snR46	PAP1	P29468	568 aa	Known RBP	0.68	□□□□□ -2.3
snR46	snR46	SMY1	P32364	656 aa	Known RBP	0.68	□□□□□ -2.3
snR46	snR46	RTC2	P38279	296 aa		0.68	□□□□□ -2.3
snR46	snR46	YFL012W	P43580	148 aa		0.68	□□□□□ -2.3
snR46	snR46	DLD2	P46681	530 aa	Known RBP	0.68	□□□□□ -2.3
snR46	snR46	AAD10	P47182	288 aa		0.68	□□□□□ -2.3
snR46	snR46	APT1	P49435	187 aa	Known RBP	0.68	□□□□□ -2.3
snR46	snR46	YGR018C	P53211	109 aa		0.68	□□□□□ -2.3
snR46	snR46	PAP2	P53632	584 aa	Known RBP	0.68	□□□□□ -2.3
snR46	snR46	HEF3	P53978	1044 aa	Known RBP	0.68	□□□□□ -2.3
snR46	snR46	LUC7	Q07508	261 aa	Predicted RBP	0.68	□□□□□ -2.3
snR46	snR46	SNX3	Q08826	162 aa	Known RBP	0.68	□□□□□ -2.3
snR46	snR46	CTI6	Q08923	506 aa		0.68	□□□□□ -2.3
snR46	snR46	PKH2	Q12236	1081 aa	Known RBP	0.68	□□□□□ -2.3
snR46	snR46	RAX2	Q12465	1220 aa		0.68	□□□□□ -2.3
snR46	snR46	ARD1	P07347	238 aa	Predicted RBP	0.67	□□□□□ -2.3
snR46	snR46	EST1	P17214	699 aa	Predicted RBP	0.67	□□□□□ -2.3
snR46	snR46	MUD1	P32605	298 aa	Known RBP	0.67	□□□□□ -2.3
snR46	snR46	XRS2	P33301	854 aa		0.67	□□□□□ -2.3
snR46	snR46	CBP4	P37267	147 aa		0.67	□□□□□ -2.3
snR46	snR46	YPS6	P40583	537 aa		0.67	□□□□□ -2.3
snR46	snR46	URB2	P47108	1174 aa		0.67	□□□□□ -2.3
snR46	snR46	NDE2	Q07500	545 aa		0.67	□□□□□ -2.3
snR46	snR46	DNL4	Q08387	944 aa	Predicted RBP	0.67	□□□□□ -2.3
snR46	snR46	TRM8	Q12009	286 aa		0.67	□□□□□ -2.3
snR46	snR46	RRD2	Q12461	358 aa		0.67	□□□□□ -2.3
snR46	snR46	TY1B-A	O13527	1196 aa	Known RBP	0.66	□□□□□ -2.3
snR46	snR46	CYC3	P06182	269 aa		0.66	□□□□□ -2.3
snR46	snR46	OLE1	P21147	510 aa	Known RBP	0.66	□□□□□ -2.3
snR46	snR46	AAT2	P23542	418 aa	Known RBP	0.66	□□□□□ -2.3
snR46	snR46	PRE8	P23639	250 aa		0.66	□□□□□ -2.3
snR46	snR46	DPH2	P32461	534 aa		0.66	□□□□□ -2.3
snR46	snR46	AUR1	P36107	401 aa	Predicted RBP	0.66	□□□□□ -2.3
snR46	snR46	ACA1	P39970	489 aa		0.66	□□□□□ -2.3
snR46	snR46	YIP5	P53108	310 aa		0.66	□□□□□ -2.3
snR46	snR46	RRT6	P53117	311 aa	Predicted RBP	0.66	□□□□□ -2.3
snR46	snR46	PEX8	P53248	589 aa		0.66	□□□□□ -2.3
snR46	snR46	IPI3	P53877	555 aa		0.66	□□□□□ -2.3
snR46	snR46	KTR6	P54070	446 aa		0.66	□□□□□ -2.3
snR46	snR46	YMR181C	Q03231	154 aa		0.66	□□□□□ -2.3
snR46	snR46	COQ9	Q05779	260 aa		0.66	□□□□□ -2.3
snR46	snR46	TIM18	Q08749	192 aa		0.66	□□□□□ -2.3
snR46	snR46	AHC1	Q12433	566 aa		0.66	□□□□□ -2.3
snR46	snR46	TIP1	P27654	210 aa	Predicted RBP	0.65	□□□□□ -2.31
snR46	snR46	YCR041W	P37265	110 aa		0.65	□□□□□ -2.31
snR46	snR46	TRS85	P46944	698 aa		0.65	□□□□□ -2.31
snR46	snR46	YGL262W	P53054	175 aa		0.65	□□□□□ -2.31
snR46	snR46	YPS5	P53057	165 aa		0.65	□□□□□ -2.31
snR46	snR46	TFC6	Q06339	672 aa		0.65	□□□□□ -2.31
snR46	snR46	FMP40	Q08968	688 aa	Predicted RBP	0.65	□□□□□ -2.31
snR46	snR46	APC2	Q12440	853 aa		0.65	□□□□□ -2.31
snR46	snR46	SGS1	P35187	1447 aa		0.64	□□□□□ -2.31
snR46	snR46	MRP13	P12686	339 aa		0.64	□□□□□ -2.31
snR46	snR46	YIH1	P25637	258 aa		0.64	□□□□□ -2.31
snR46	snR46	TPS2	P31688	896 aa	Known RBP	0.64	□□□□□ -2.31
snR46	snR46	KAR9	P32526	644 aa		0.64	□□□□□ -2.31
snR46	snR46	YME2	P32843	850 aa		0.64	□□□□□ -2.31
snR46	snR46	PTK1	P36002	662 aa	Predicted RBP	0.64	□□□□□ -2.31
snR46	snR46	GPI18	P38211	433 aa		0.64	□□□□□ -2.31
snR46	snR46	YPT35	P38815	214 aa	Known RBP	0.64	□□□□□ -2.31
snR46	snR46	MBB1	P39534	108 aa		0.64	□□□□□ -2.31
snR46	snR46	OXA1	P39952	402 aa		0.64	□□□□□ -2.31
snR46	snR46	SYG1	P40528	902 aa		0.64	□□□□□ -2.31
snR46	snR46	MDE1	P47095	244 aa		0.64	□□□□□ -2.31
snR46	snR46	MTQ1	P53944	314 aa		0.64	□□□□□ -2.31
snR46	snR46	TPS1	Q00764	495 aa	Known RBP	0.64	□□□□□ -2.31
snR46	snR46	JID1	Q12350	301 aa		0.64	□□□□□ -2.31
snR46	snR46	FOL3	Q12676	427 aa	Predicted RBP	0.64	□□□□□ -2.31
snR46	snR46	TEF1	P02994	458 aa	Known RBP	0.63	□□□□□ -2.31
snR46	snR46	SNF1	P06782	633 aa	Known RBP	0.63	□□□□□ -2.31
snR46	snR46	COR1	P07256	457 aa		0.63	□□□□□ -2.31
snR46	snR46	SSB1	P11484	613 aa	Known RBP	0.63	□□□□□ -2.31
snR46	snR46	PRR1	P28708	518 aa		0.63	□□□□□ -2.31
snR46	snR46	ATP11	P32453	318 aa		0.63	□□□□□ -2.31
snR46	snR46	PRY2	P36110	329 aa		0.63	□□□□□ -2.31
snR46	snR46	YBR137W	P38276	179 aa		0.63	□□□□□ -2.31
snR46	snR46	YGP1	P38616	354 aa	Known RBP	0.63	□□□□□ -2.31
snR46	snR46	MSR1	P38714	643 aa		0.63	□□□□□ -2.31
snR46	snR46	SSB2	P40150	613 aa	Known RBP	0.63	□□□□□ -2.31
snR46	snR46	BIR1	P47134	954 aa		0.63	□□□□□ -2.31
snR46	snR46	YIP1	P53039	248 aa		0.63	□□□□□ -2.31
snR46	snR46	DOS2	P54858	310 aa		0.63	□□□□□ -2.31
snR46	snR46	MRD1	Q06106	887 aa	Known RBP	0.63	□□□□□ -2.31
snR46	snR46	SLF1	Q12034	447 aa	Known RBP	0.63	□□□□□ -2.31
snR46	snR46	YPR022C	Q12139	1133 aa		0.63	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms