RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W TUP1P16649 713 aa1.66□□□□□ -2.14
CTF4YPR135W RNR1P21524 888 aaKnown RBP1.66□□□□□ -2.14
CTF4YPR135W RNR3P21672 869 aaKnown RBP1.66□□□□□ -2.14
CTF4YPR135W CWP1P28319 239 aa1.66□□□□□ -2.14
CTF4YPR135W PRR1P28708 518 aa1.66□□□□□ -2.14
CTF4YPR135W PRE2P30656 287 aaKnown RBP1.66□□□□□ -2.14
CTF4YPR135W DSS4P32601 143 aa1.66□□□□□ -2.14
CTF4YPR135W TKL2P33315 681 aa1.66□□□□□ -2.14
CTF4YPR135W YMC2P38087 329 aa1.66□□□□□ -2.14
CTF4YPR135W PCH2P38126 564 aa1.66□□□□□ -2.14
CTF4YPR135W FTH1P38310 465 aa1.66□□□□□ -2.14
CTF4YPR135W YNG2P38806 282 aaKnown RBP1.66□□□□□ -2.14
CTF4YPR135W MRX1P40050 688 aa1.66□□□□□ -2.14
CTF4YPR135W FTR1P40088 404 aa1.66□□□□□ -2.14
CTF4YPR135W PCL7P40186 285 aa1.66□□□□□ -2.14
CTF4YPR135W YJL070CP40361 888 aa1.66□□□□□ -2.14
CTF4YPR135W UBP7P40453 1071 aa1.66□□□□□ -2.14
CTF4YPR135W CAB2P40506 365 aa1.66□□□□□ -2.14
CTF4YPR135W ULP2P40537 1034 aaPredicted RBP1.66□□□□□ -2.14
CTF4YPR135W BIT61P47041 543 aa1.66□□□□□ -2.14
CTF4YPR135W ASN1P49089 572 aaKnown RBP1.66□□□□□ -2.14
CTF4YPR135W NNF2P53253 936 aa1.66□□□□□ -2.14
CTF4YPR135W NOP13P53883 403 aaKnown RBP RIP-Chip data1.66□□□□□ -2.14not detected
CTF4YPR135W CIK1Q01649 594 aa1.66□□□□□ -2.14
CTF4YPR135W MFM1Q02783 413 aa1.66□□□□□ -2.14
CTF4YPR135W FDC1Q03034 503 aa1.66□□□□□ -2.14
CTF4YPR135W YLL032CQ07834 825 aaKnown RBP RIP-Chip data1.66□□□□□ -2.14not detected
CTF4YPR135W CLP1Q08685 445 aaPredicted RBP1.66□□□□□ -2.14
CTF4YPR135W YOR387CQ08910 206 aa1.66□□□□□ -2.14
CTF4YPR135W GPM3Q12326 303 aa1.66□□□□□ -2.14
CTF4YPR135W SKS1Q12505 502 aa1.66□□□□□ -2.14
CTF4YPR135W ECM3Q99252 613 aa1.66□□□□□ -2.14
CTF4YPR135W ILV1P00927 576 aaKnown RBP1.65□□□□□ -2.14
CTF4YPR135W SEC63P14906 663 aa1.65□□□□□ -2.14
CTF4YPR135W DAP2P18962 818 aa1.65□□□□□ -2.14
CTF4YPR135W ADH7P25377 361 aa1.65□□□□□ -2.14
CTF4YPR135W ERV1P27882 189 aa1.65□□□□□ -2.14
CTF4YPR135W UGP1P32861 499 aaKnown RBP1.65□□□□□ -2.14
CTF4YPR135W RIB7P33312 244 aa1.65□□□□□ -2.14
CTF4YPR135W ALY1P36117 915 aa1.65□□□□□ -2.14
CTF4YPR135W MMS4P38257 691 aa1.65□□□□□ -2.14
CTF4YPR135W UTP9P38882 575 aaKnown RBP1.65□□□□□ -2.14
CTF4YPR135W FHL1P39521 936 aa1.65□□□□□ -2.14
CTF4YPR135W GET2P40056 285 aa1.65□□□□□ -2.14
CTF4YPR135W FAU1P40099 211 aa1.65□□□□□ -2.14
CTF4YPR135W RGI2P40188 164 aa1.65□□□□□ -2.14
CTF4YPR135W MET28P40573 187 aa1.65□□□□□ -2.14
CTF4YPR135W ZIM17P42844 174 aa1.65□□□□□ -2.14
CTF4YPR135W SNF12P53628 566 aa1.65□□□□□ -2.14
CTF4YPR135W ERV25P54837 211 aaKnown RBP1.65□□□□□ -2.14
CTF4YPR135W RPA49Q01080 415 aaPredicted RBP1.65□□□□□ -2.14
CTF4YPR135W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.65□□□□□ -2.14not detected
CTF4YPR135W AAT1Q01802 451 aa1.65□□□□□ -2.14
CTF4YPR135W MUB1Q03162 620 aa1.65□□□□□ -2.14
CTF4YPR135W RCO1Q04779 684 aa1.65□□□□□ -2.14
CTF4YPR135W YSH1Q06224 779 aaPredicted RBP1.65□□□□□ -2.14
CTF4YPR135W TMA16Q08687 178 aa1.65□□□□□ -2.14
CTF4YPR135W GPM2Q12008 311 aa1.65□□□□□ -2.14
CTF4YPR135W CHS5Q12114 671 aaKnown RBP1.65□□□□□ -2.14
CTF4YPR135W HUA2Q12134 243 aa1.65□□□□□ -2.14
CTF4YPR135W SFI1Q12369 946 aa1.65□□□□□ -2.14
CTF4YPR135W YLR302CO13544 120 aa1.65□□□□□ -2.15
CTF4YPR135W RPC40P07703 335 aaKnown RBP1.65□□□□□ -2.15
CTF4YPR135W DBP3P20447 523 aaKnown RBP1.65□□□□□ -2.15
CTF4YPR135W SEC62P21825 274 aa1.65□□□□□ -2.15
CTF4YPR135W OCA4P25366 362 aa1.65□□□□□ -2.15
CTF4YPR135W MKK1P32490 508 aa1.65□□□□□ -2.15
CTF4YPR135W GYP6P32806 458 aa1.65□□□□□ -2.15
CTF4YPR135W APL3P38065 1025 aa1.65□□□□□ -2.15
CTF4YPR135W PIH1P38768 344 aa1.65□□□□□ -2.15
CTF4YPR135W YHR097CP38809 366 aaKnown RBP1.65□□□□□ -2.15
CTF4YPR135W GDI1P39958 451 aaKnown RBP1.65□□□□□ -2.15
CTF4YPR135W ARB1P40024 610 aaKnown RBP1.65□□□□□ -2.15
CTF4YPR135W YIL077CP40508 320 aa1.65□□□□□ -2.15
CTF4YPR135W AAD10P47182 288 aa1.65□□□□□ -2.15
CTF4YPR135W YGR151CP53287 111 aa1.65□□□□□ -2.15
CTF4YPR135W IGO1P53897 168 aa1.65□□□□□ -2.15
CTF4YPR135W VPS9P54787 451 aa1.65□□□□□ -2.15
CTF4YPR135W TRS23Q03784 219 aa1.65□□□□□ -2.15
CTF4YPR135W DPB4Q04603 196 aaKnown RBP1.65□□□□□ -2.15
CTF4YPR135W RNH1Q04740 348 aa1.65□□□□□ -2.15
CTF4YPR135W CDD1Q06549 142 aa1.65□□□□□ -2.15
CTF4YPR135W YPL216WQ08964 1102 aa1.65□□□□□ -2.15
CTF4YPR135W STT4P37297 1900 aa1.65□□□□□ -2.15
CTF4YPR135W STF1P01098 86 aa1.64□□□□□ -2.15
CTF4YPR135W NOP1P15646 327 aaKnown RBP1.64□□□□□ -2.15
CTF4YPR135W SMI1P32566 505 aa1.64□□□□□ -2.15
CTF4YPR135W HOT13P36078 116 aa1.64□□□□□ -2.15
CTF4YPR135W COS111P38308 924 aa1.64□□□□□ -2.15
CTF4YPR135W RTT105P40063 208 aa1.64□□□□□ -2.15
CTF4YPR135W IST3P40565 148 aaPredicted RBP1.64□□□□□ -2.15
CTF4YPR135W PSA1P41940 361 aaKnown RBP1.64□□□□□ -2.15
CTF4YPR135W SPG5P42933 373 aa1.64□□□□□ -2.15
CTF4YPR135W ROK1P45818 564 aaPredicted RBP1.64□□□□□ -2.15
CTF4YPR135W IDS2P46958 469 aa1.64□□□□□ -2.15
CTF4YPR135W COS12P53053 380 aa1.64□□□□□ -2.15
CTF4YPR135W AIM33Q04516 312 aa1.64□□□□□ -2.15
CTF4YPR135W ROY1Q04847 553 aa1.64□□□□□ -2.15
CTF4YPR135W RTN1Q04947 295 aaKnown RBP1.64□□□□□ -2.15
CTF4YPR135W PHO92Q06390 306 aa1.64□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms