RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W APN1P22936 367 aa2.16□□□□□ -2.06
SEC16YPL085W ARO7P32178 256 aa2.16□□□□□ -2.06
SEC16YPL085W ASH1P34233 588 aa2.16□□□□□ -2.06
SEC16YPL085W LDB7P38210 180 aa2.16□□□□□ -2.06
SEC16YPL085W UBX7P38349 436 aa2.16□□□□□ -2.06
SEC16YPL085W YHR210CP38893 341 aa2.16□□□□□ -2.06
SEC16YPL085W SEC27P41811 889 aaKnown RBP2.16□□□□□ -2.06
SEC16YPL085W FMP33P46998 180 aa2.16□□□□□ -2.06
SEC16YPL085W YJR149WP47177 404 aa2.16□□□□□ -2.06
SEC16YPL085W TRM82Q03774 444 aa2.16□□□□□ -2.06
SEC16YPL085W AIM33Q04516 312 aa2.16□□□□□ -2.06
SEC16YPL085W SYT1Q06836 1226 aa2.16□□□□□ -2.06
SEC16YPL085W SYO1Q07395 620 aa2.16□□□□□ -2.06
SEC16YPL085W GYP1Q08484 637 aa2.16□□□□□ -2.06
SEC16YPL085W RSA1Q08932 381 aa2.16□□□□□ -2.06
SEC16YPL085W PIN2Q12057 282 aa2.16□□□□□ -2.06
SEC16YPL085W DPM1P14020 267 aaKnown RBP2.16□□□□□ -2.06
SEC16YPL085W CMK2P22517 447 aa2.16□□□□□ -2.06
SEC16YPL085W SLA1P32790 1244 aa2.16□□□□□ -2.06
SEC16YPL085W CUE2P36075 443 aaKnown RBP2.16□□□□□ -2.06
SEC16YPL085W IML3P38265 245 aa2.16□□□□□ -2.06
SEC16YPL085W BMT5P40493 336 aa2.16□□□□□ -2.06
SEC16YPL085W RET2P43621 546 aa2.16□□□□□ -2.06
SEC16YPL085W BNA1P47096 177 aa2.16□□□□□ -2.06
SEC16YPL085W PAC10P48363 199 aa2.16□□□□□ -2.06
SEC16YPL085W MAP1Q01662 387 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
SEC16YPL085W FMN1Q03778 218 aa2.16□□□□□ -2.06
SEC16YPL085W YDR239CQ03780 787 aa2.16□□□□□ -2.06
SEC16YPL085W HSP31Q04432 237 aa2.16□□□□□ -2.06
SEC16YPL085W SGO1Q08490 590 aa2.16□□□□□ -2.06
SEC16YPL085W RTC5Q12108 567 aaKnown RBP2.16□□□□□ -2.06
SEC16YPL085W CAN1P04817 590 aa2.16□□□□□ -2.06
SEC16YPL085W PMR1P13586 950 aa2.16□□□□□ -2.06
SEC16YPL085W FUR1P18562 216 aaKnown RBP2.16□□□□□ -2.06
SEC16YPL085W RAM1P22007 431 aa2.16□□□□□ -2.06
SEC16YPL085W PEX1P24004 1043 aa2.16□□□□□ -2.06
SEC16YPL085W VMA8P32610 256 aaKnown RBP2.16□□□□□ -2.06
SEC16YPL085W ATO2P32907 282 aa2.16□□□□□ -2.06
SEC16YPL085W THI2P38141 450 aa2.16□□□□□ -2.06
SEC16YPL085W CHK1P38147 527 aa2.16□□□□□ -2.06
SEC16YPL085W NCL1P38205 684 aaKnown RBP2.16□□□□□ -2.06
SEC16YPL085W NDT80P38830 627 aa2.16□□□□□ -2.06
SEC16YPL085W MNL1P38888 796 aa2.16□□□□□ -2.06
SEC16YPL085W PCF11P39081 626 aaPredicted RBP2.16□□□□□ -2.06
SEC16YPL085W ALG8P40351 577 aa2.16□□□□□ -2.06
SEC16YPL085W IRC5P43610 853 aa2.16□□□□□ -2.06
SEC16YPL085W PRP3Q03338 469 aaPredicted RBP2.16□□□□□ -2.06
SEC16YPL085W SNU56Q03782 492 aaKnown RBP2.16□□□□□ -2.06
SEC16YPL085W VBA1Q04301 562 aa2.16□□□□□ -2.06
SEC16YPL085W YPR097WQ06839 1073 aa2.16□□□□□ -2.06
SEC16YPL085W SKS1Q12505 502 aa2.16□□□□□ -2.06
SEC16YPL085W REP2P03872 296 aa2.16□□□□□ -2.06
SEC16YPL085W BI2P03873 423 aa2.16□□□□□ -2.06
SEC16YPL085W MCK1P21965 375 aaKnown RBP2.16□□□□□ -2.06
SEC16YPL085W YIH1P25637 258 aa2.16□□□□□ -2.06
SEC16YPL085W GUT2P32191 649 aa2.16□□□□□ -2.06
SEC16YPL085W MKK2P32491 506 aa2.16□□□□□ -2.06
SEC16YPL085W YHR033WP38690 423 aa2.16□□□□□ -2.06
SEC16YPL085W PIH1P38768 344 aa2.16□□□□□ -2.06
SEC16YPL085W SBE22P38814 852 aa2.16□□□□□ -2.06
SEC16YPL085W PEX28P38848 579 aa2.16□□□□□ -2.06
SEC16YPL085W VPS52P39904 641 aa2.16□□□□□ -2.06
SEC16YPL085W PKP1P40530 394 aa2.16□□□□□ -2.06
SEC16YPL085W PAC11P40960 533 aa2.16□□□□□ -2.06
SEC16YPL085W CCT8P47079 568 aaKnown RBP2.16□□□□□ -2.06
SEC16YPL085W YDL183CP48569 320 aa2.16□□□□□ -2.06
SEC16YPL085W DIP5P53388 608 aa2.16□□□□□ -2.06
SEC16YPL085W PRM1P53835 661 aa2.16□□□□□ -2.06
SEC16YPL085W TDA7P53882 636 aaPredicted RBP2.16□□□□□ -2.06
SEC16YPL085W ACT1P60010 375 aaKnown RBP2.16□□□□□ -2.06
SEC16YPL085W STP1Q00947 519 aa2.16□□□□□ -2.06
SEC16YPL085W HAS1Q03532 505 aaKnown RBP2.16□□□□□ -2.06
SEC16YPL085W VMS1Q04311 632 aaKnown RBP2.16□□□□□ -2.06
SEC16YPL085W MRX10Q05648 414 aa2.16□□□□□ -2.06
SEC16YPL085W ADE13Q05911 482 aaKnown RBP2.16□□□□□ -2.06
SEC16YPL085W RGC1Q06108 1083 aaKnown RBP2.16□□□□□ -2.06
SEC16YPL085W YLR001CQ07895 862 aa2.16□□□□□ -2.06
SEC16YPL085W BRX1Q08235 291 aaKnown RBP2.16□□□□□ -2.06
SEC16YPL085W YLR053CQ12026 108 aa2.16□□□□□ -2.06
SEC16YPL085W BI3Q9ZZW7 517 aa2.16□□□□□ -2.06
SEC16YPL085W GPX1P36014 167 aa2.15□□□□□ -2.06
SEC16YPL085W URA8P38627 578 aaPredicted RBP2.15□□□□□ -2.06
SEC16YPL085W YEL028WP39989 153 aa2.15□□□□□ -2.06
SEC16YPL085W YIR007WP40566 764 aa2.15□□□□□ -2.06
SEC16YPL085W YJR124CP47159 448 aa2.15□□□□□ -2.06
SEC16YPL085W GNP1P48813 663 aa2.15□□□□□ -2.06
SEC16YPL085W REC102Q02721 264 aa2.15□□□□□ -2.06
SEC16YPL085W NAN1Q02931 896 aaKnown RBP2.15□□□□□ -2.06
SEC16YPL085W ATP25Q03153 612 aa2.15□□□□□ -2.06
SEC16YPL085W TRM12Q04235 462 aa2.15□□□□□ -2.06
SEC16YPL085W YOL036WQ08206 761 aa2.15□□□□□ -2.06
SEC16YPL085W EMP46Q12396 444 aa2.15□□□□□ -2.06
SEC16YPL085W TMA17Q12513 150 aa2.15□□□□□ -2.06
SEC16YPL085W ARO3P14843 370 aaKnown RBP2.15□□□□□ -2.06
SEC16YPL085W HEM15P16622 393 aa2.15□□□□□ -2.06
SEC16YPL085W IFM1P25038 676 aa2.15□□□□□ -2.06
SEC16YPL085W NAM9P27929 486 aa2.15□□□□□ -2.06
SEC16YPL085W FRE1P32791 686 aa2.15□□□□□ -2.06
SEC16YPL085W VBA2P38358 474 aaKnown RBP2.15□□□□□ -2.06
SEC16YPL085W YGR054WP53235 642 aaKnown RBP2.15□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms