RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeast

Gene SNF8, Length 702 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF8	YPL002C	YGR021W	P53212	290 aa		4.07	□□□□□ -1.76
SNF8	YPL002C	SCW4	P53334	386 aa	Known RBP	4.07	□□□□□ -1.76
SNF8	YPL002C	YNL143C	P53908	130 aa		4.07	□□□□□ -1.76
SNF8	YPL002C	ESBP6	P53918	673 aa		4.07	□□□□□ -1.76
SNF8	YPL002C	IDP3	P53982	420 aa	Known RBP	4.07	□□□□□ -1.76
SNF8	YPL002C	ELP3	Q02908	557 aa	Known RBP	4.07	□□□□□ -1.76
SNF8	YPL002C	EBS1	Q03466	884 aa	Known RBP	4.07	□□□□□ -1.76
SNF8	YPL002C	YDR131C	Q03899	556 aa		4.07	□□□□□ -1.76
SNF8	YPL002C	GRC3	Q07845	632 aa		4.07	□□□□□ -1.76
SNF8	YPL002C	BSC6	Q08280	497 aa		4.07	□□□□□ -1.76
SNF8	YPL002C	DBP10	Q12389	995 aa	Known RBP	4.07	□□□□□ -1.76
SNF8	YPL002C	SEY1	Q99287	776 aa		4.07	□□□□□ -1.76
SNF8	YPL002C	YBR056W-A	I2HB52	66 aa		4.06	□□□□□ -1.76
SNF8	YPL002C	SCH9	P11792	824 aa	Known RBP	4.06	□□□□□ -1.76
SNF8	YPL002C	KAR3	P17119	729 aa		4.06	□□□□□ -1.76
SNF8	YPL002C	LDB16	P25587	256 aa		4.06	□□□□□ -1.76
SNF8	YPL002C	RPL5	P26321	297 aa	Known RBP	4.06	□□□□□ -1.76
SNF8	YPL002C	RPC37	P36121	282 aa		4.06	□□□□□ -1.76
SNF8	YPL002C	APE4	P38821	490 aa		4.06	□□□□□ -1.76
SNF8	YPL002C	MNN1	P39106	762 aa		4.06	□□□□□ -1.76
SNF8	YPL002C	YEL028W	P39989	153 aa		4.06	□□□□□ -1.76
SNF8	YPL002C	YER189W	P40104	122 aa		4.06	□□□□□ -1.76
SNF8	YPL002C	AIM20	P40451	204 aa		4.06	□□□□□ -1.76
SNF8	YPL002C	YIL054W	P40524	105 aa		4.06	□□□□□ -1.76
SNF8	YPL002C	GZF3	P42944	551 aa	Known RBP	4.06	□□□□□ -1.76
SNF8	YPL002C	ALK1	P43633	760 aa	Known RBP	4.06	□□□□□ -1.76
SNF8	YPL002C	SAE2	P46946	345 aa		4.06	□□□□□ -1.76
SNF8	YPL002C	MNN11	P46985	422 aa	Known RBP	4.06	□□□□□ -1.76
SNF8	YPL002C	SRB7	P47822	140 aa		4.06	□□□□□ -1.76
SNF8	YPL002C	OCA1	P50946	238 aa	Predicted RBP	4.06	□□□□□ -1.76
SNF8	YPL002C	SWC4	P53201	476 aa		4.06	□□□□□ -1.76
SNF8	YPL002C	TEP1	P53916	434 aa		4.06	□□□□□ -1.76
SNF8	YPL002C	ATG16	Q03818	150 aa		4.06	□□□□□ -1.76
SNF8	YPL002C	VTI1	Q04338	217 aa		4.06	□□□□□ -1.76
SNF8	YPL002C	RUD3	Q12234	484 aa	Known RBP	4.06	□□□□□ -1.76
SNF8	YPL002C	CRC1	Q12289	327 aa		4.06	□□□□□ -1.76
SNF8	YPL002C	GLE1	Q12315	538 aa		4.06	□□□□□ -1.76
SNF8	YPL002C	AFI1	Q99222	893 aa		4.06	□□□□□ -1.76
SNF8	YPL002C	YOR338W	Q99326	363 aa		4.06	□□□□□ -1.76
SNF8	YPL002C	YPR089W	O13585	888 aa		4.05	□□□□□ -1.76
SNF8	YPL002C	YMR085W	P0CF18	432 aa		4.05	□□□□□ -1.76
SNF8	YPL002C	YAP1	P19880	650 aa	Known RBP	4.05	□□□□□ -1.76
SNF8	YPL002C	ASK1	P35734	292 aa		4.05	□□□□□ -1.76
SNF8	YPL002C	MTG2	P38860	518 aa		4.05	□□□□□ -1.76
SNF8	YPL002C	AIP1	P46680	615 aa	Known RBP	4.05	□□□□□ -1.76
SNF8	YPL002C	DLD2	P46681	530 aa	Known RBP	4.05	□□□□□ -1.76
SNF8	YPL002C	BIR1	P47134	954 aa		4.05	□□□□□ -1.76
SNF8	YPL002C	YJR142W	P47173	342 aa		4.05	□□□□□ -1.76
SNF8	YPL002C	HLJ1	P48353	224 aa		4.05	□□□□□ -1.76
SNF8	YPL002C	KEL2	P50090	882 aa		4.05	□□□□□ -1.76
SNF8	YPL002C	YGL108C	P53139	140 aa		4.05	□□□□□ -1.76
SNF8	YPL002C	IPI3	P53877	555 aa		4.05	□□□□□ -1.76
SNF8	YPL002C	VAC7	P53950	1165 aa		4.05	□□□□□ -1.76
SNF8	YPL002C	BET4	Q00618	327 aa		4.05	□□□□□ -1.76
SNF8	YPL002C	STP3	Q05937	343 aa		4.05	□□□□□ -1.76
SNF8	YPL002C	KAP95	Q06142	861 aa	Known RBP	4.05	□□□□□ -1.76
SNF8	YPL002C	PGC1	Q08959	321 aa		4.05	□□□□□ -1.76
SNF8	YPL002C	TRM8	Q12009	286 aa		4.05	□□□□□ -1.76
SNF8	YPL002C	VPS68	Q12016	184 aa		4.05	□□□□□ -1.76
SNF8	YPL002C	YDR262W	Q12331	272 aa		4.05	□□□□□ -1.76
SNF8	YPL002C	DDP1	Q99321	188 aa	Known RBP	4.05	□□□□□ -1.76
SNF8	YPL002C	SCL1	P21243	252 aa	Known RBP	4.04	□□□□□ -1.76
SNF8	YPL002C	UBA1	P22515	1024 aa	Known RBP	4.04	□□□□□ -1.76
SNF8	YPL002C	YJU2	P28320	278 aa	Predicted RBP	4.04	□□□□□ -1.76
SNF8	YPL002C	PET309	P32522	965 aa	Predicted RBP	4.04	□□□□□ -1.76
SNF8	YPL002C	ARC19	P33204	171 aa	Known RBP	4.04	□□□□□ -1.76
SNF8	YPL002C	RPC25	P35718	212 aa		4.04	□□□□□ -1.76
SNF8	YPL002C	ARA1	P38115	344 aa		4.04	□□□□□ -1.76
SNF8	YPL002C	SWC5	P38326	303 aa		4.04	□□□□□ -1.76
SNF8	YPL002C	CAJ1	P39101	391 aa		4.04	□□□□□ -1.76
SNF8	YPL002C	YJL193W	P39542	402 aa		4.04	□□□□□ -1.76
SNF8	YPL002C	OAF1	P39720	1047 aa	Predicted RBP	4.04	□□□□□ -1.76
SNF8	YPL002C	YER130C	P39959	443 aa		4.04	□□□□□ -1.76
SNF8	YPL002C	TMA108	P40462	946 aa		4.04	□□□□□ -1.76
SNF8	YPL002C	ROK1	P45818	564 aa	Predicted RBP	4.04	□□□□□ -1.76
SNF8	YPL002C	YJR030C	P47101	745 aa		4.04	□□□□□ -1.76
SNF8	YPL002C	ASK10	P48361	1146 aa		4.04	□□□□□ -1.76
SNF8	YPL002C	YPT11	P48559	417 aa		4.04	□□□□□ -1.76
SNF8	YPL002C	TRF5	P48561	642 aa	Known RBP	4.04	□□□□□ -1.76
SNF8	YPL002C	YNL247W	P53852	767 aa	Known RBP	4.04	□□□□□ -1.76
SNF8	YPL002C	REG1	Q00816	1014 aa		4.04	□□□□□ -1.76
SNF8	YPL002C	RSF1	Q05043	376 aa		4.04	□□□□□ -1.76
SNF8	YPL002C	SWC7	Q06707	132 aa		4.04	□□□□□ -1.76
SNF8	YPL002C	YPR078C	Q06813	372 aa		4.04	□□□□□ -1.76
SNF8	YPL002C	PLB3	Q08108	686 aa		4.04	□□□□□ -1.76
SNF8	YPL002C	EFG1	Q3E705	233 aa	Known RBP	4.04	□□□□□ -1.76
SNF8	YPL002C	BI2	P03873	423 aa		4.03	□□□□□ -1.76
SNF8	YPL002C	VPS33	P20795	691 aa		4.03	□□□□□ -1.76
SNF8	YPL002C	EPT1	P22140	391 aa		4.03	□□□□□ -1.76
SNF8	YPL002C	RBK1	P25332	333 aa		4.03	□□□□□ -1.76
SNF8	YPL002C	MSH1	P25846	959 aa		4.03	□□□□□ -1.76
SNF8	YPL002C	DEP1	P31385	405 aa		4.03	□□□□□ -1.76
SNF8	YPL002C	HXT4	P32467	576 aa		4.03	□□□□□ -1.76
SNF8	YPL002C	IME2	P32581	645 aa		4.03	□□□□□ -1.76
SNF8	YPL002C	YKL100C	P34248	587 aa		4.03	□□□□□ -1.76
SNF8	YPL002C	RMA1	P36001	430 aa	Known RBP	4.03	□□□□□ -1.76
SNF8	YPL002C	ADE17	P38009	592 aa	Known RBP	4.03	□□□□□ -1.76
SNF8	YPL002C	SPC97	P38863	823 aa		4.03	□□□□□ -1.76
SNF8	YPL002C	RPH1	P39956	796 aa		4.03	□□□□□ -1.76
SNF8	YPL002C	IES5	P40060	125 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 37.8 ms