RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB4	YOR171C	DRN1	P53255	507 aa	Known RBP	3.16	□□□□□ -1.9
LCB4	YOR171C	YGR126W	P53274	230 aa		3.16	□□□□□ -1.9
LCB4	YOR171C	CAF130	P53280	1122 aa	Predicted RBP	3.16	□□□□□ -1.9
LCB4	YOR171C	SLT2	Q00772	484 aa		3.16	□□□□□ -1.9
LCB4	YOR171C	KAP120	Q02932	1032 aa		3.16	□□□□□ -1.9
LCB4	YOR171C	VPS74	Q06385	345 aa		3.16	□□□□□ -1.9
LCB4	YOR171C	AIM6	Q07716	390 aa		3.16	□□□□□ -1.9
LCB4	YOR171C	MDM20	Q12387	796 aa	Known RBP	3.16	□□□□□ -1.9
LCB4	YOR171C	GAL4	P04386	881 aa		3.15	□□□□□ -1.91
LCB4	YOR171C	CBP1	P07252	654 aa		3.15	□□□□□ -1.91
LCB4	YOR171C	CDC23	P16522	626 aa		3.15	□□□□□ -1.91
LCB4	YOR171C	UBA1	P22515	1024 aa	Known RBP	3.15	□□□□□ -1.91
LCB4	YOR171C	YCL068C	P25593	260 aa		3.15	□□□□□ -1.91
LCB4	YOR171C	ADY2	P25613	283 aa		3.15	□□□□□ -1.91
LCB4	YOR171C	BEM1	P29366	551 aa		3.15	□□□□□ -1.91
LCB4	YOR171C	ZIP1	P31111	875 aa		3.15	□□□□□ -1.91
LCB4	YOR171C	MAL32	P38158	584 aa		3.15	□□□□□ -1.91
LCB4	YOR171C	EGD2	P38879	174 aa	Known RBP	3.15	□□□□□ -1.91
LCB4	YOR171C	JHD1	P40034	492 aa		3.15	□□□□□ -1.91
LCB4	YOR171C	QRI1	P43123	477 aa	Known RBP	3.15	□□□□□ -1.91
LCB4	YOR171C	GLG2	P47011	380 aa		3.15	□□□□□ -1.91
LCB4	YOR171C	PET130	P47065	347 aa		3.15	□□□□□ -1.91
LCB4	YOR171C	ASN1	P49089	572 aa	Known RBP	3.15	□□□□□ -1.91
LCB4	YOR171C	APT1	P49435	187 aa	Known RBP	3.15	□□□□□ -1.91
LCB4	YOR171C	YGL117W	P53133	265 aa		3.15	□□□□□ -1.91
LCB4	YOR171C	RMD9	P53140	646 aa	Known RBP	3.15	□□□□□ -1.91
LCB4	YOR171C	TWF1	P53250	332 aa		3.15	□□□□□ -1.91
LCB4	YOR171C	MAL12	P53341	584 aa		3.15	□□□□□ -1.91
LCB4	YOR171C	YNL092W	P53934	400 aa		3.15	□□□□□ -1.91
LCB4	YOR171C	WAR1	Q03631	944 aa		3.15	□□□□□ -1.91
LCB4	YOR171C	RPN9	Q04062	393 aa	Known RBP	3.15	□□□□□ -1.91
LCB4	YOR171C	BUD22	Q04347	519 aa	Known RBP	3.15	□□□□□ -1.91
LCB4	YOR171C	RCO1	Q04779	684 aa		3.15	□□□□□ -1.91
LCB4	YOR171C	SRO7	Q12038	1033 aa		3.15	□□□□□ -1.91
LCB4	YOR171C	AEP3	Q12089	606 aa		3.15	□□□□□ -1.91
LCB4	YOR171C	MTR10	Q99189	972 aa		3.15	□□□□□ -1.91
LCB4	YOR171C	YLR278C	Q05854	1341 aa		3.15	□□□□□ -1.91
LCB4	YOR171C	TUS1	Q06412	1307 aa		3.15	□□□□□ -1.91
LCB4	YOR171C	YLL067C	Q07888	1374 aa		3.15	□□□□□ -1.91
LCB4	YOR171C	CDC37	P06101	506 aa	Known RBP	3.14	□□□□□ -1.91
LCB4	YOR171C	DSF1	P0CX08	502 aa		3.14	□□□□□ -1.91
LCB4	YOR171C	YNR073C	P0CX09	502 aa		3.14	□□□□□ -1.91
LCB4	YOR171C	SRP54	P20424	541 aa	Known RBP	3.14	□□□□□ -1.91
LCB4	YOR171C	CMK2	P22517	447 aa		3.14	□□□□□ -1.91
LCB4	YOR171C	PET18	P25362	215 aa		3.14	□□□□□ -1.91
LCB4	YOR171C	SYN8	P31377	255 aa		3.14	□□□□□ -1.91
LCB4	YOR171C	SIP1	P32578	815 aa		3.14	□□□□□ -1.91
LCB4	YOR171C	MRPL4	P36517	319 aa		3.14	□□□□□ -1.91
LCB4	YOR171C	RTT107	P38850	1070 aa		3.14	□□□□□ -1.91
LCB4	YOR171C	FMC1	P40491	155 aa		3.14	□□□□□ -1.91
LCB4	YOR171C	CAB2	P40506	365 aa		3.14	□□□□□ -1.91
LCB4	YOR171C	IST3	P40565	148 aa	Predicted RBP	3.14	□□□□□ -1.91
LCB4	YOR171C	BST1	P43571	1029 aa		3.14	□□□□□ -1.91
LCB4	YOR171C	COG1	P53079	417 aa		3.14	□□□□□ -1.91
LCB4	YOR171C	RTT102	P53330	157 aa		3.14	□□□□□ -1.91
LCB4	YOR171C	CPR8	P53728	308 aa		3.14	□□□□□ -1.91
LCB4	YOR171C	YNL181W	P53878	407 aa		3.14	□□□□□ -1.91
LCB4	YOR171C	DIA1	P54005	336 aa		3.14	□□□□□ -1.91
LCB4	YOR171C	BNA7	Q04066	261 aa		3.14	□□□□□ -1.91
LCB4	YOR171C	GPN3	Q06543	272 aa		3.14	□□□□□ -1.91
LCB4	YOR171C	TIP41	Q12199	356 aa		3.14	□□□□□ -1.91
LCB4	YOR171C	ZPS1	Q12512	249 aa		3.14	□□□□□ -1.91
LCB4	YOR171C	RAD9	P14737	1309 aa		3.14	□□□□□ -1.91
LCB4	YOR171C	RAD7	P06779	565 aa		3.13	□□□□□ -1.91
LCB4	YOR171C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
LCB4	YOR171C	MEK1	P24719	497 aa	Predicted RBP	3.13	□□□□□ -1.91
LCB4	YOR171C	ATP7	P30902	174 aa		3.13	□□□□□ -1.91
LCB4	YOR171C	NDI1	P32340	513 aa		3.13	□□□□□ -1.91
LCB4	YOR171C	ARP2	P32381	391 aa	Known RBP	3.13	□□□□□ -1.91
LCB4	YOR171C	LHS1	P36016	881 aa		3.13	□□□□□ -1.91
LCB4	YOR171C	YBR139W	P38109	508 aa		3.13	□□□□□ -1.91
LCB4	YOR171C	PFF1	P38244	976 aa		3.13	□□□□□ -1.91
LCB4	YOR171C	FSH1	P38777	243 aa	Known RBP	3.13	□□□□□ -1.91
LCB4	YOR171C	MLH1	P38920	769 aa		3.13	□□□□□ -1.91
LCB4	YOR171C	THO1	P40040	218 aa	Known RBP	3.13	□□□□□ -1.91
LCB4	YOR171C	TMA22	P47089	198 aa	Predicted RBP	3.13	□□□□□ -1.91
LCB4	YOR171C	SSU72	P53538	206 aa	Predicted RBP	3.13	□□□□□ -1.91
LCB4	YOR171C	EAF7	P53911	425 aa	Known RBP	3.13	□□□□□ -1.91
LCB4	YOR171C	SPC24	Q04477	213 aa		3.13	□□□□□ -1.91
LCB4	YOR171C	RQC1	Q05468	723 aa	Known RBP	3.13	□□□□□ -1.91
LCB4	YOR171C	ARO10	Q06408	635 aa		3.13	□□□□□ -1.91
LCB4	YOR171C	ATG23	Q06671	453 aa		3.13	□□□□□ -1.91
LCB4	YOR171C	YEH2	Q07950	538 aa		3.13	□□□□□ -1.91
LCB4	YOR171C	DNL4	Q08387	944 aa	Predicted RBP	3.13	□□□□□ -1.91
LCB4	YOR171C	LEA1	Q08963	238 aa	Predicted RBP	3.13	□□□□□ -1.91
LCB4	YOR171C	LYS21	Q12122	440 aa	Known RBP	3.13	□□□□□ -1.91
LCB4	YOR171C	YJR112W-A	Q3E743	109 aa		3.13	□□□□□ -1.91
LCB4	YOR171C	SWI1	P09547	1314 aa		3.13	□□□□□ -1.91
LCB4	YOR171C	ARG4	P04076	463 aa	Predicted RBP	3.13	□□□□□ -1.91
LCB4	YOR171C	YPK1	P12688	680 aa	Known RBP	3.13	□□□□□ -1.91
LCB4	YOR171C	YAP1	P19880	650 aa	Known RBP	3.13	□□□□□ -1.91
LCB4	YOR171C	RNR3	P21672	869 aa	Known RBP	3.13	□□□□□ -1.91
LCB4	YOR171C	SNT1	P25357	1226 aa		3.13	□□□□□ -1.91
LCB4	YOR171C	RAD14	P28519	371 aa		3.13	□□□□□ -1.91
LCB4	YOR171C	PRO3	P32263	286 aa	Known RBP	3.13	□□□□□ -1.91
LCB4	YOR171C	PMT1	P33775	817 aa		3.13	□□□□□ -1.91
LCB4	YOR171C	VPS51	P36116	164 aa		3.13	□□□□□ -1.91
LCB4	YOR171C	ARO9	P38840	513 aa	Predicted RBP	3.13	□□□□□ -1.91
LCB4	YOR171C	YEL020C	P39994	560 aa		3.13	□□□□□ -1.91
LCB4	YOR171C	ICE2	P40499	491 aa		3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms