RNA–Protein interactions for RNA: YNL308C

KRI1, Transcript of Essential nucleolar protein required for 40S ribosome biogenesis, yeast

Gene KRI1, Length 1,776 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KRI1	YNL308C	NHP10	Q03435	203 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	PRP42	Q03776	544 aa	Known RBP	3.58	□□□□□ -1.84
KRI1	YNL308C	YET2	Q04210	160 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	YMR027W	Q04371	470 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	DUS4	Q06063	367 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	PDR8	Q06149	701 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	GMC2	Q06201	188 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	NDE2	Q07500	545 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	IWR1	Q07532	353 aa	Predicted RBP	3.58	□□□□□ -1.84
KRI1	YNL308C	FRE3	Q08905	711 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	YOR022C	Q12204	715 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	HER1	Q12276	1246 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	YOR214C	Q12282	236 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	YOL114C	Q12322	202 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	NCB2	Q92317	146 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	DIF1	O13577	133 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	COX4	P04037	155 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	TPK2	P06245	380 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	NSP1	P14907	823 aa	Known RBP	3.58	□□□□□ -1.84
KRI1	YNL308C	CDC23	P16522	626 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	AMD2	P22580	549 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	SGV1	P23293	657 aa	Known RBP	3.58	□□□□□ -1.84
KRI1	YNL308C	PTC6	P25646	442 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	ASF2	P32448	525 aa	Predicted RBP	3.58	□□□□□ -1.84
KRI1	YNL308C	DOA4	P32571	926 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	CYS4	P32582	507 aa	Known RBP	3.58	□□□□□ -1.84
KRI1	YNL308C	ANP1	P32629	500 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	TSA1	P34760	196 aa	Known RBP	3.58	□□□□□ -1.84
KRI1	YNL308C	YPT52	P36018	234 aa	Known RBP	3.58	□□□□□ -1.84
KRI1	YNL308C	YDR089W	P38966	869 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	STT3	P39007	718 aa	Known RBP	3.58	□□□□□ -1.84
KRI1	YNL308C	PSF2	P40359	213 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	TIR3	P40552	269 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	GTT1	P40582	234 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	CIN1	P40987	1014 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	HXT16	P47185	567 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	UPF3	P48412	387 aa	Known RBP	3.58	□□□□□ -1.84
KRI1	YNL308C	SPT20	P50875	604 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	HOL1	P53389	586 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	SHR3	Q02774	210 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	RSC9	Q03124	581 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	SCS7	Q03529	384 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	YDR132C	Q03900	495 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	SEG1	Q04279	960 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	YLR297W	Q05899	129 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	GPN3	Q06543	272 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	YFT2	Q06676	274 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	CDA2	Q06703	312 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	RXT3	Q07458	294 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	LOT6	Q07923	191 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	THI20	Q08224	551 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	FEX1	Q08913	375 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	YPL191C	Q08930	360 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	AEP3	Q12089	606 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	REX3	Q12090	404 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	HAL9	Q12180	1030 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	TAH18	Q12181	623 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	KCS1	Q12494	1050 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	YBR182C-A	Q8TGU6	64 aa		3.58	□□□□□ -1.84
KRI1	YNL308C	CBP2	P03874	630 aa	Predicted RBP	3.57	□□□□□ -1.84
KRI1	YNL308C	SCEI	P03882	235 aa		3.57	□□□□□ -1.84
KRI1	YNL308C	RPP2A	P05319	106 aa	Known RBP	3.57	□□□□□ -1.84
KRI1	YNL308C	RPS13	P05756	151 aa	Known RBP	3.57	□□□□□ -1.84
KRI1	YNL308C	SNF1	P06782	633 aa	Known RBP	3.57	□□□□□ -1.84
KRI1	YNL308C	HOP1	P20050	605 aa		3.57	□□□□□ -1.84
KRI1	YNL308C	SAR1	P20606	190 aa	Known RBP	3.57	□□□□□ -1.84
KRI1	YNL308C	PPH22	P23595	377 aa		3.57	□□□□□ -1.84
KRI1	YNL308C	VMA16	P23968	213 aa		3.57	□□□□□ -1.84
KRI1	YNL308C	DMC1	P25453	334 aa		3.57	□□□□□ -1.84
KRI1	YNL308C	UTR4	P32626	227 aa		3.57	□□□□□ -1.84
KRI1	YNL308C	RPT3	P33298	428 aa	Known RBP	3.57	□□□□□ -1.84
KRI1	YNL308C	AIM3	P38266	947 aa	Known RBP	3.57	□□□□□ -1.84
KRI1	YNL308C	MMS21	P38632	267 aa		3.57	□□□□□ -1.84
KRI1	YNL308C	PPE1	P38796	400 aa		3.57	□□□□□ -1.84
KRI1	YNL308C	YHR078W	P38799	552 aa		3.57	□□□□□ -1.84
KRI1	YNL308C	YHR202W	P38887	602 aa		3.57	□□□□□ -1.84
KRI1	YNL308C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	3.57	□□□□□ -1.84	not detected
KRI1	YNL308C	CSM2	P40465	213 aa		3.57	□□□□□ -1.84
KRI1	YNL308C	ASG1	P40467	964 aa		3.57	□□□□□ -1.84
KRI1	YNL308C	YRB2	P40517	327 aa		3.57	□□□□□ -1.84
KRI1	YNL308C	ERR3	P42222	437 aa		3.57	□□□□□ -1.84
KRI1	YNL308C	LIA1	P47120	325 aa	Known RBP	3.57	□□□□□ -1.84
KRI1	YNL308C	BNA2	P47125	453 aa		3.57	□□□□□ -1.84
KRI1	YNL308C	YJR141W	P47172	347 aa	Predicted RBP	3.57	□□□□□ -1.84
KRI1	YNL308C	ARO8	P53090	500 aa	Known RBP	3.57	□□□□□ -1.84
KRI1	YNL308C	TPN1	P53099	579 aa		3.57	□□□□□ -1.84
KRI1	YNL308C	VPS62	P53285	467 aa		3.57	□□□□□ -1.84
KRI1	YNL308C	SLI1	P53304	468 aa		3.57	□□□□□ -1.84
KRI1	YNL308C	NOP19	P53317	196 aa	Predicted RBP	3.57	□□□□□ -1.84
KRI1	YNL308C	MEP3	P53390	489 aa		3.57	□□□□□ -1.84
KRI1	YNL308C	SNF12	P53628	566 aa		3.57	□□□□□ -1.84
KRI1	YNL308C	TEP1	P53916	434 aa		3.57	□□□□□ -1.84
KRI1	YNL308C	MTD1	Q02046	320 aa	Known RBP	3.57	□□□□□ -1.84
KRI1	YNL308C	YPL068C	Q02749	293 aa		3.57	□□□□□ -1.84
KRI1	YNL308C	YAP6	Q03935	383 aa		3.57	□□□□□ -1.84
KRI1	YNL308C	YHM2	Q04013	314 aa		3.57	□□□□□ -1.84
KRI1	YNL308C	MYO5	Q04439	1219 aa	Known RBP	3.57	□□□□□ -1.84
KRI1	YNL308C	SPO77	Q06134	477 aa		3.57	□□□□□ -1.84
KRI1	YNL308C	YPD1	Q07688	167 aa		3.57	□□□□□ -1.84
KRI1	YNL308C	MUM3	Q08750	479 aa		3.57	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms