RNA–Protein interactions for RNA: YNL242W

ATG2, Transcript of Peripheral membrane protein required for autophagic vesicle formation, yeast

Gene ATG2, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG2	YNL242W	NPP2	P39997	493 aa		3.91	□□□□□ -1.78
ATG2	YNL242W	SET4	P42948	560 aa		3.91	□□□□□ -1.78
ATG2	YNL242W	RMD8	P43620	662 aa		3.91	□□□□□ -1.78
ATG2	YNL242W	MNN5	P46982	586 aa		3.91	□□□□□ -1.78
ATG2	YNL242W	IRC18	P47056	224 aa		3.91	□□□□□ -1.78
ATG2	YNL242W	MPS3	P47069	682 aa		3.91	□□□□□ -1.78
ATG2	YNL242W	YJR154W	P47181	346 aa		3.91	□□□□□ -1.78
ATG2	YNL242W	ASN1	P49089	572 aa	Known RBP	3.91	□□□□□ -1.78
ATG2	YNL242W	NAS6	P50086	228 aa		3.91	□□□□□ -1.78
ATG2	YNL242W	CPR8	P53728	308 aa		3.91	□□□□□ -1.78
ATG2	YNL242W	RMI1	Q02685	241 aa		3.91	□□□□□ -1.78
ATG2	YNL242W	YHC1	Q05900	231 aa	Known RBP	3.91	□□□□□ -1.78
ATG2	YNL242W	YOR352W	Q08816	343 aa		3.91	□□□□□ -1.78
ATG2	YNL242W	MDY2	Q12285	212 aa		3.91	□□□□□ -1.78
ATG2	YNL242W	YRM1	Q12340	786 aa		3.91	□□□□□ -1.78
ATG2	YNL242W	EFG1	Q3E705	233 aa	Known RBP	3.91	□□□□□ -1.78
ATG2	YNL242W	RPS9A	O13516	197 aa	Known RBP	3.9	□□□□□ -1.78
ATG2	YNL242W	COS2	P0CX12	379 aa		3.9	□□□□□ -1.78
ATG2	YNL242W	COS3	P0CX13	379 aa		3.9	□□□□□ -1.78
ATG2	YNL242W	IFM1	P25038	676 aa		3.9	□□□□□ -1.78
ATG2	YNL242W	RGI1	P40043	161 aa	Predicted RBP	3.9	□□□□□ -1.78
ATG2	YNL242W	DOT6	P40059	670 aa	Known RBP	3.9	□□□□□ -1.78
ATG2	YNL242W	QDR2	P40474	542 aa		3.9	□□□□□ -1.78
ATG2	YNL242W	NIT3	P49954	291 aa		3.9	□□□□□ -1.78
ATG2	YNL242W	YGL036W	P53185	909 aa	Predicted RBP	3.9	□□□□□ -1.78
ATG2	YNL242W	YNR065C	P53751	1116 aa		3.9	□□□□□ -1.78
ATG2	YNL242W	GCN5	Q03330	439 aa		3.9	□□□□□ -1.78
ATG2	YNL242W	RIF2	Q06208	395 aa		3.9	□□□□□ -1.78
ATG2	YNL242W	FMP25	Q08023	583 aa		3.9	□□□□□ -1.78
ATG2	YNL242W	GAS5	Q08193	484 aa		3.9	□□□□□ -1.78
ATG2	YNL242W	HOS1	Q12214	470 aa		3.9	□□□□□ -1.78
ATG2	YNL242W	RPP1A	P05318	106 aa	Predicted RBP	3.9	□□□□□ -1.78
ATG2	YNL242W	RAD7	P06779	565 aa		3.9	□□□□□ -1.78
ATG2	YNL242W	KGD1	P20967	1014 aa	Known RBP	3.9	□□□□□ -1.78
ATG2	YNL242W	RAM1	P22007	431 aa		3.9	□□□□□ -1.78
ATG2	YNL242W	CHA1	P25379	360 aa	Known RBP	3.9	□□□□□ -1.78
ATG2	YNL242W	BUB2	P26448	306 aa	Predicted RBP	3.9	□□□□□ -1.78
ATG2	YNL242W	BEM3	P32873	1128 aa		3.9	□□□□□ -1.78
ATG2	YNL242W	SGE1	P33335	543 aa		3.9	□□□□□ -1.78
ATG2	YNL242W	HSL7	P38274	827 aa		3.9	□□□□□ -1.78
ATG2	YNL242W	TOS1	P38288	455 aa		3.9	□□□□□ -1.78
ATG2	YNL242W	YAP1801	P38856	637 aa		3.9	□□□□□ -1.78
ATG2	YNL242W	QDR1	P40475	563 aa		3.9	□□□□□ -1.78
ATG2	YNL242W	VPS25	P47142	202 aa		3.9	□□□□□ -1.78
ATG2	YNL242W	CSL4	P53859	292 aa	Predicted RBP	3.9	□□□□□ -1.78
ATG2	YNL242W	YPD1	Q07688	167 aa		3.9	□□□□□ -1.78
ATG2	YNL242W	BRX1	Q08235	291 aa	Known RBP	3.9	□□□□□ -1.78
ATG2	YNL242W	YLR049C	Q12110	428 aa		3.9	□□□□□ -1.78
ATG2	YNL242W	FAS2	P19097	1887 aa	Known RBP	3.9	□□□□□ -1.79
ATG2	YNL242W	ATP6	P00854	259 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	TUB2	P02557	457 aa	Known RBP	3.9	□□□□□ -1.79
ATG2	YNL242W	HIS5	P07172	385 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	3.9	□□□□□ -1.79	not detected
ATG2	YNL242W	UGA1	P17649	471 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	COX13	P32799	129 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	SDS22	P36047	338 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	TVP38	P36164	337 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	DED81	P38707	554 aa	Known RBP	3.9	□□□□□ -1.79
ATG2	YNL242W	RRP3	P38712	501 aa	Known RBP	3.9	□□□□□ -1.79
ATG2	YNL242W	TOM22	P49334	152 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	ALT1	P52893	592 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	MNT2	P53059	558 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	COG1	P53079	417 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	PEX13	P80667	386 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	PNG1	Q02890	363 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	RCO1	Q04779	684 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	ECM38	Q05902	660 aa	Predicted RBP	3.9	□□□□□ -1.79
ATG2	YNL242W	SKG3	Q06315	1026 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	CUR1	Q06469	252 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	MCD1	Q12158	566 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	YGL194C-A	Q2V2P6	80 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	YOL159C-A	Q3E769	90 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	MHF2	Q3E829	80 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	CBP2	P03874	630 aa	Predicted RBP	3.9	□□□□□ -1.79
ATG2	YNL242W	RPL4A	P10664	362 aa	Known RBP	3.9	□□□□□ -1.79
ATG2	YNL242W	INO1	P11986	533 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	APE1	P14904	514 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	COT1	P32798	439 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	ECM8	P38246	354 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	URA8	P38627	578 aa	Predicted RBP	3.9	□□□□□ -1.79
ATG2	YNL242W	IPT1	P38954	527 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	MSS4	P38994	779 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	RSP5	P39940	809 aa	Known RBP	3.9	□□□□□ -1.79
ATG2	YNL242W	NOP16	P40007	231 aa	Known RBP	3.9	□□□□□ -1.79
ATG2	YNL242W	CIN1	P40987	1014 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	ALR2	P43553	858 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	GYP8	P43570	497 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	BUD13	P46947	266 aa	Predicted RBP	3.9	□□□□□ -1.79
ATG2	YNL242W	RPL4B	P49626	362 aa	Known RBP	3.9	□□□□□ -1.79
ATG2	YNL242W	ROM1	P53046	1155 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	ATF2	P53296	535 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	PBP1	P53297	722 aa	Known RBP	3.9	□□□□□ -1.79
ATG2	YNL242W	SLI1	P53304	468 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	SPP1	Q03012	353 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	HDA3	Q06623	655 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	YGK3	Q12222	375 aa	Predicted RBP	3.9	□□□□□ -1.79
ATG2	YNL242W	YDR461C-A	Q2V2P7	80 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	SUS1	Q6WNK7	96 aa		3.9	□□□□□ -1.79
ATG2	YNL242W	BIT2	P38346	545 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	LSM8	P47093	109 aa	Known RBP	3.89	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 36.9 ms