RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C YLR278CQ05854 1341 aa3.35□□□□□ -1.87
WHI3YNL197C YCR007CP25354 239 aa3.35□□□□□ -1.87
WHI3YNL197C POT1P27796 417 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
WHI3YNL197C FUN19P28003 413 aaPredicted RBP3.35□□□□□ -1.87
WHI3YNL197C BEM1P29366 551 aa3.35□□□□□ -1.87
WHI3YNL197C NIP1P32497 812 aaKnown RBP3.35□□□□□ -1.87
WHI3YNL197C ASC1P38011 319 aaKnown RBP3.35□□□□□ -1.87
WHI3YNL197C OSH3P38713 996 aaKnown RBP3.35□□□□□ -1.87
WHI3YNL197C FAU1P40099 211 aa3.35□□□□□ -1.87
WHI3YNL197C OCA2P53949 197 aa3.35□□□□□ -1.87
WHI3YNL197C YMR130WQ04223 302 aa3.35□□□□□ -1.87
WHI3YNL197C DIS3Q08162 1001 aaKnown RBP3.35□□□□□ -1.87
WHI3YNL197C FRE6Q12473 712 aa3.35□□□□□ -1.87
WHI3YNL197C TY1B-AO13527 1196 aaKnown RBP3.34□□□□□ -1.87
WHI3YNL197C MGR1P25573 417 aa3.34□□□□□ -1.87
WHI3YNL197C BRF1P29056 596 aa3.34□□□□□ -1.87
WHI3YNL197C ACH1P32316 526 aa3.34□□□□□ -1.87
WHI3YNL197C GYP6P32806 458 aa3.34□□□□□ -1.87
WHI3YNL197C YMR124WP39523 943 aaKnown RBP3.34□□□□□ -1.87
WHI3YNL197C VHS2P40463 436 aa3.34□□□□□ -1.87
WHI3YNL197C RPS0BP46654 252 aaKnown RBP3.34□□□□□ -1.87
WHI3YNL197C RMD9P53140 646 aaKnown RBP3.34□□□□□ -1.87
WHI3YNL197C SAM50P53969 484 aa3.34□□□□□ -1.87
WHI3YNL197C RBA50Q04418 439 aa3.34□□□□□ -1.87
WHI3YNL197C DCS1Q06151 350 aa3.34□□□□□ -1.87
WHI3YNL197C YLR456WQ06199 204 aa3.34□□□□□ -1.87
WHI3YNL197C SMF3Q12078 473 aaPredicted RBP3.34□□□□□ -1.87
WHI3YNL197C SPT7P35177 1332 aa3.34□□□□□ -1.87
WHI3YNL197C SCEIP03882 235 aa3.34□□□□□ -1.88
WHI3YNL197C RHB1P25378 209 aa3.34□□□□□ -1.88
WHI3YNL197C ANP1P32629 500 aa3.34□□□□□ -1.88
WHI3YNL197C YPT53P36019 220 aa3.34□□□□□ -1.88
WHI3YNL197C SCO2P38072 301 aa3.34□□□□□ -1.88
WHI3YNL197C YIL152WP40455 235 aa3.34□□□□□ -1.88
WHI3YNL197C CSM2P40465 213 aa3.34□□□□□ -1.88
WHI3YNL197C SAS2P40963 338 aa3.34□□□□□ -1.88
WHI3YNL197C MSS11Q03825 758 aa3.34□□□□□ -1.88
WHI3YNL197C YMR254CQ04838 102 aa3.34□□□□□ -1.88
WHI3YNL197C IVY1Q04934 453 aa3.34□□□□□ -1.88
WHI3YNL197C MLH2Q07980 695 aa3.34□□□□□ -1.88
WHI3YNL197C NFI1Q12216 726 aa3.34□□□□□ -1.88
WHI3YNL197C BUB3P26449 341 aa3.33□□□□□ -1.88
WHI3YNL197C ECM15P35195 104 aa3.33□□□□□ -1.88
WHI3YNL197C ZTA1P38230 334 aaKnown RBP3.33□□□□□ -1.88
WHI3YNL197C PCA1P38360 1216 aa3.33□□□□□ -1.88
WHI3YNL197C FAD1P38913 306 aa3.33□□□□□ -1.88
WHI3YNL197C POP1P41812 875 aa3.33□□□□□ -1.88
WHI3YNL197C GPI1P53306 609 aa3.33□□□□□ -1.88
WHI3YNL197C HSP31Q04432 237 aa3.33□□□□□ -1.88
WHI3YNL197C MTR10Q99189 972 aa3.33□□□□□ -1.88
WHI3YNL197C DAP2P18962 818 aa3.32□□□□□ -1.88
WHI3YNL197C SPC110P32380 944 aa3.32□□□□□ -1.88
WHI3YNL197C FRE1P32791 686 aa3.32□□□□□ -1.88
WHI3YNL197C SOR1P35497 357 aaKnown RBP3.32□□□□□ -1.88
WHI3YNL197C SWH1P35845 1188 aa3.32□□□□□ -1.88
WHI3YNL197C ADH5P38113 351 aaKnown RBP3.32□□□□□ -1.88
WHI3YNL197C YSW1P38280 609 aa3.32□□□□□ -1.88
WHI3YNL197C MLH1P38920 769 aa3.32□□□□□ -1.88
WHI3YNL197C VPS52P39904 641 aa3.32□□□□□ -1.88
WHI3YNL197C RHO5P53879 331 aaKnown RBP3.32□□□□□ -1.88
WHI3YNL197C GLO2Q05584 274 aa3.32□□□□□ -1.88
WHI3YNL197C SOR2Q07786 357 aa3.32□□□□□ -1.88
WHI3YNL197C AEP3Q12089 606 aa3.32□□□□□ -1.88
WHI3YNL197C MED2Q12124 431 aa3.32□□□□□ -1.88
WHI3YNL197C ADE4P04046 510 aaKnown RBP3.32□□□□□ -1.88
WHI3YNL197C RAD24P32641 659 aa3.32□□□□□ -1.88
WHI3YNL197C MDV1P47025 714 aa3.32□□□□□ -1.88
WHI3YNL197C YJR011CP47086 261 aaPredicted RBP3.32□□□□□ -1.88
WHI3YNL197C MLC1P53141 149 aa3.32□□□□□ -1.88
WHI3YNL197C STP1Q00947 519 aa3.32□□□□□ -1.88
WHI3YNL197C PRP42Q03776 544 aaKnown RBP3.32□□□□□ -1.88
WHI3YNL197C SYO1Q07395 620 aa3.32□□□□□ -1.88
WHI3YNL197C HSP42Q12329 375 aa3.32□□□□□ -1.88
WHI3YNL197C KRR1P25586 316 aaPredicted RBP3.31□□□□□ -1.88
WHI3YNL197C ERG1P32476 496 aaKnown RBP3.31□□□□□ -1.88
WHI3YNL197C VPS17P32913 551 aa3.31□□□□□ -1.88
WHI3YNL197C MMS4P38257 691 aa3.31□□□□□ -1.88
WHI3YNL197C NAS2P40555 220 aa3.31□□□□□ -1.88
WHI3YNL197C TRS85P46944 698 aa3.31□□□□□ -1.88
WHI3YNL197C TOF1P53840 1238 aa3.31□□□□□ -1.88
WHI3YNL197C TDA7P53882 636 aaPredicted RBP3.31□□□□□ -1.88
WHI3YNL197C RLI1Q03195 608 aaKnown RBP3.31□□□□□ -1.88
WHI3YNL197C MRPL1Q04599 285 aa3.31□□□□□ -1.88
WHI3YNL197C CAR1P00812 333 aaKnown RBP3.31□□□□□ -1.88
WHI3YNL197C LEU4P06208 619 aaKnown RBP3.31□□□□□ -1.88
WHI3YNL197C ASK1P35734 292 aa3.31□□□□□ -1.88
WHI3YNL197C LAS1P36146 502 aaPredicted RBP3.31□□□□□ -1.88
WHI3YNL197C SIF2P38262 535 aa3.31□□□□□ -1.88
WHI3YNL197C PCI8P40512 444 aa3.31□□□□□ -1.88
WHI3YNL197C PHO86P46956 311 aa3.31□□□□□ -1.88
WHI3YNL197C ATP22P50273 684 aaPredicted RBP3.31□□□□□ -1.88
WHI3YNL197C BTN2P53286 410 aa3.31□□□□□ -1.88
WHI3YNL197C NCS2P53923 493 aaPredicted RBP3.31□□□□□ -1.88
WHI3YNL197C ARK1P53974 638 aa3.31□□□□□ -1.88
WHI3YNL197C YDR387CQ04162 555 aa3.31□□□□□ -1.88
WHI3YNL197C YDR341CQ05506 607 aaKnown RBP3.31□□□□□ -1.88
WHI3YNL197C UBX3Q12229 455 aa3.31□□□□□ -1.88
WHI3YNL197C MIC60P36112 540 aa3.3□□□□□ -1.88
WHI3YNL197C RRP4P38792 359 aaKnown RBP3.3□□□□□ -1.88
WHI3YNL197C STN1P38960 494 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 31.4 ms