RNA–Protein interactions for RNA: YLR381W

CTF3, Transcript of Outer kinetochore protein that forms a complex with Mcm16p and Mcm22p, yeastyeast

Gene CTF3, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF3YLR381W EFR3Q03653 782 aaKnown RBP7.22□□□□□ -1.25
CTF3YLR381W ATG16Q03818 150 aa7.22□□□□□ -1.25
CTF3YLR381W GAS2Q06135 555 aa7.22□□□□□ -1.25
CTF3YLR381W BOP2Q06150 570 aa7.22□□□□□ -1.25
CTF3YLR381W AAD15Q08361 143 aa7.22□□□□□ -1.25
CTF3YLR381W MED1Q12321 566 aa7.22□□□□□ -1.25
CTF3YLR381W AFI1Q99222 893 aa7.22□□□□□ -1.25
CTF3YLR381W MSS18P08593 268 aa7.21□□□□□ -1.25
CTF3YLR381W SPS4P09937 338 aa7.21□□□□□ -1.25
CTF3YLR381W ENA1P13587 1091 aa7.21□□□□□ -1.25
CTF3YLR381W MIP1P15801 1254 aa7.21□□□□□ -1.25
CTF3YLR381W HCM1P25364 564 aa7.21□□□□□ -1.25
CTF3YLR381W MGT1P26188 188 aa7.21□□□□□ -1.25
CTF3YLR381W CDC12P32468 407 aaKnown RBP7.21□□□□□ -1.25
CTF3YLR381W DHR2P36009 735 aaPredicted RBP7.21□□□□□ -1.25
CTF3YLR381W SHM2P37291 469 aaKnown RBP7.21□□□□□ -1.25
CTF3YLR381W AVT5P38176 459 aa7.21□□□□□ -1.25
CTF3YLR381W MSC7P38694 644 aa7.21□□□□□ -1.25
CTF3YLR381W ARN2P38724 620 aa7.21□□□□□ -1.25
CTF3YLR381W YAP1801P38856 637 aa7.21□□□□□ -1.25
CTF3YLR381W YMR147WP40218 223 aaKnown RBP7.21□□□□□ -1.25
CTF3YLR381W LYS20P48570 428 aaKnown RBP7.21□□□□□ -1.25
CTF3YLR381W PEX13P80667 386 aa7.21□□□□□ -1.25
CTF3YLR381W ENA2Q01896 1091 aa7.21□□□□□ -1.25
CTF3YLR381W MRPS16Q02608 121 aa7.21□□□□□ -1.25
CTF3YLR381W UTP21Q06078 939 aaPredicted RBP7.21□□□□□ -1.25
CTF3YLR381W ENA5Q12691 1091 aa7.21□□□□□ -1.25
CTF3YLR381W MPD2Q99316 277 aa7.21□□□□□ -1.25
CTF3YLR381W SUR1P33300 382 aa7.21□□□□□ -1.26
CTF3YLR381W KAE1P36132 386 aa7.21□□□□□ -1.26
CTF3YLR381W MRPL15P36523 253 aa7.21□□□□□ -1.26
CTF3YLR381W NOP4P37838 685 aaKnown RBP7.21□□□□□ -1.26
CTF3YLR381W POL12P38121 705 aaPredicted RBP7.21□□□□□ -1.26
CTF3YLR381W RIM2P38127 377 aa7.21□□□□□ -1.26
CTF3YLR381W NCL1P38205 684 aaKnown RBP7.21□□□□□ -1.26
CTF3YLR381W PAN5P38787 379 aa7.21□□□□□ -1.26
CTF3YLR381W NSG1P38837 291 aa7.21□□□□□ -1.26
CTF3YLR381W IPT1P38954 527 aa7.21□□□□□ -1.26
CTF3YLR381W RPN3P40016 523 aaKnown RBP7.21□□□□□ -1.26
CTF3YLR381W TOS3P43637 560 aa7.21□□□□□ -1.26
CTF3YLR381W PEX8P53248 589 aa7.21□□□□□ -1.26
CTF3YLR381W LSB1P53281 241 aa7.21□□□□□ -1.26
CTF3YLR381W TIM44Q01852 431 aa7.21□□□□□ -1.26
CTF3YLR381W YPL108WQ02872 168 aaPredicted RBP7.21□□□□□ -1.26
CTF3YLR381W YLR224WQ05947 369 aa7.21□□□□□ -1.26
CTF3YLR381W ISR1Q06098 443 aaKnown RBP7.21□□□□□ -1.26
CTF3YLR381W YOR022CQ12204 715 aa7.21□□□□□ -1.26
CTF3YLR381W ECM3Q99252 613 aa7.21□□□□□ -1.26
CTF3YLR381W CET1O13297 549 aaPredicted RBP7.2□□□□□ -1.26
CTF3YLR381W RPS18AP0CX55 146 aaKnown RBP7.2□□□□□ -1.26
CTF3YLR381W RPS18BP0CX56 146 aaPredicted RBP7.2□□□□□ -1.26
CTF3YLR381W PET9P18239 318 aaKnown RBP7.2□□□□□ -1.26
CTF3YLR381W SIR1P21691 654 aa7.2□□□□□ -1.26
CTF3YLR381W SEC62P21825 274 aa7.2□□□□□ -1.26
CTF3YLR381W SAT4P25333 603 aaKnown RBP7.2□□□□□ -1.26
CTF3YLR381W POF1P25576 258 aa7.2□□□□□ -1.26
CTF3YLR381W UGA4P32837 571 aa7.2□□□□□ -1.26
CTF3YLR381W RGT1P32862 1170 aa7.2□□□□□ -1.26
CTF3YLR381W MTC2P34246 357 aa7.2□□□□□ -1.26
CTF3YLR381W SSH1P38353 490 aaKnown RBP7.2□□□□□ -1.26
CTF3YLR381W YHR182WP38870 785 aa7.2□□□□□ -1.26
CTF3YLR381W UBP5P39944 805 aa7.2□□□□□ -1.26
CTF3YLR381W PKP1P40530 394 aa7.2□□□□□ -1.26
CTF3YLR381W PRM15Q03262 622 aa7.2□□□□□ -1.26
CTF3YLR381W RTN1Q04947 295 aaKnown RBP7.2□□□□□ -1.26
CTF3YLR381W ADY4Q05955 493 aa7.2□□□□□ -1.26
CTF3YLR381W NEJ1Q06148 342 aa7.2□□□□□ -1.26
CTF3YLR381W YLR173WQ06247 608 aa7.2□□□□□ -1.26
CTF3YLR381W PIB1Q06651 286 aa7.2□□□□□ -1.26
CTF3YLR381W YET3Q07451 203 aa7.2□□□□□ -1.26
CTF3YLR381W YOR238WQ08634 303 aa7.2□□□□□ -1.26
CTF3YLR381W ATX2Q12067 313 aa7.2□□□□□ -1.26
CTF3YLR381W TY1B-NL2Q99337 1749 aaKnown RBP7.2□□□□□ -1.26
CTF3YLR381W STE2D6VTK4 431 aa7.2□□□□□ -1.26
CTF3YLR381W HIS5P07172 385 aa7.2□□□□□ -1.26
CTF3YLR381W RPS1BP23248 255 aaKnown RBP7.2□□□□□ -1.26
CTF3YLR381W YDJ1P25491 409 aaKnown RBP7.2□□□□□ -1.26
CTF3YLR381W MCM10P32354 571 aa7.2□□□□□ -1.26
CTF3YLR381W SRB6P32570 121 aa7.2□□□□□ -1.26
CTF3YLR381W MRP4P32902 394 aa7.2□□□□□ -1.26
CTF3YLR381W RPS1AP33442 255 aaKnown RBP7.2□□□□□ -1.26
CTF3YLR381W ECM8P38246 354 aa7.2□□□□□ -1.26
CTF3YLR381W IST2P38250 946 aa7.2□□□□□ -1.26
CTF3YLR381W MMS4P38257 691 aa7.2□□□□□ -1.26
CTF3YLR381W RGI1P40043 161 aaPredicted RBP7.2□□□□□ -1.26
CTF3YLR381W QDR1P40475 563 aa7.2□□□□□ -1.26
CTF3YLR381W ZIM17P42844 174 aa7.2□□□□□ -1.26
CTF3YLR381W CTR1P49573 406 aa7.2□□□□□ -1.26
CTF3YLR381W MRH4P53166 561 aa7.2□□□□□ -1.26
CTF3YLR381W NRD1P53617 575 aaKnown RBP RIP-Chip data7.2□□□□□ -1.26not detected
CTF3YLR381W YAT1P80235 687 aa7.2□□□□□ -1.26
CTF3YLR381W ERO1Q03103 563 aa7.2□□□□□ -1.26
CTF3YLR381W RLI1Q03195 608 aaKnown RBP7.2□□□□□ -1.26
CTF3YLR381W SMA2Q04658 369 aa7.2□□□□□ -1.26
CTF3YLR381W TFC6Q06339 672 aa7.2□□□□□ -1.26
CTF3YLR381W SNA4Q07549 140 aa7.2□□□□□ -1.26
CTF3YLR381W YPL199CQ08954 240 aa7.2□□□□□ -1.26
CTF3YLR381W FAL1Q12099 399 aaKnown RBP7.2□□□□□ -1.26
CTF3YLR381W LDB19Q12502 818 aa7.2□□□□□ -1.26
CTF3YLR381W PUT4P15380 627 aa7.19□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms