RNA–Protein interactions for RNA: YLR181C

VTA1, Transcript of Multivesicular body (MVB) protein, yeast

Gene VTA1, Length 993 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTA1	YLR181C	OSH3	P38713	996 aa	Known RBP	4.91	□□□□□ -1.62
VTA1	YLR181C	YTA12	P40341	825 aa		4.91	□□□□□ -1.62
VTA1	YLR181C	YJL068C	P40363	299 aa		4.91	□□□□□ -1.62
VTA1	YLR181C	CSM2	P40465	213 aa		4.91	□□□□□ -1.62
VTA1	YLR181C	YMR087W	Q04299	284 aa		4.91	□□□□□ -1.62
VTA1	YLR181C	IVY1	Q04934	453 aa		4.91	□□□□□ -1.62
VTA1	YLR181C	GRS2	Q06817	618 aa		4.91	□□□□□ -1.62
VTA1	YLR181C	BRR1	Q99177	341 aa	Predicted RBP	4.91	□□□□□ -1.62
VTA1	YLR181C	RIM2	P38127	377 aa		4.9	□□□□□ -1.63
VTA1	YLR181C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
VTA1	YLR181C	SLD5	Q03406	294 aa		4.9	□□□□□ -1.63
VTA1	YLR181C	PDR5	P33302	1511 aa	Known RBP	4.9	□□□□□ -1.63
VTA1	YLR181C	BNI1	P41832	1953 aa		4.89	□□□□□ -1.63
VTA1	YLR181C	RPL3	P14126	387 aa	Known RBP	4.89	□□□□□ -1.63
VTA1	YLR181C	CDC23	P16522	626 aa		4.89	□□□□□ -1.63
VTA1	YLR181C	YCR007C	P25354	239 aa		4.89	□□□□□ -1.63
VTA1	YLR181C	UTR4	P32626	227 aa		4.89	□□□□□ -1.63
VTA1	YLR181C	LSM5	P40089	93 aa	Known RBP	4.89	□□□□□ -1.63
VTA1	YLR181C	DIM1	P41819	318 aa	Known RBP	4.89	□□□□□ -1.63
VTA1	YLR181C	SLG1	P54867	378 aa		4.89	□□□□□ -1.63
VTA1	YLR181C	TAP42	Q04372	366 aa		4.89	□□□□□ -1.63
VTA1	YLR181C	PHO92	Q06390	306 aa		4.89	□□□□□ -1.63
VTA1	YLR181C	NRT1	Q08485	598 aa		4.89	□□□□□ -1.63
VTA1	YLR181C	DNF2	Q12675	1612 aa		4.89	□□□□□ -1.63
VTA1	YLR181C	VMR1	P38735	1592 aa		4.88	□□□□□ -1.63
VTA1	YLR181C	MES1	P00958	751 aa	Known RBP	4.88	□□□□□ -1.63
VTA1	YLR181C	SPB1	P25582	841 aa	Predicted RBP	4.88	□□□□□ -1.63
VTA1	YLR181C	SEC1	P30619	724 aa	Known RBP	4.88	□□□□□ -1.63
VTA1	YLR181C	KEL1	P38853	1164 aa	Known RBP	4.88	□□□□□ -1.63
VTA1	YLR181C	VPS52	P39904	641 aa		4.88	□□□□□ -1.63
VTA1	YLR181C	OCA1	P50946	238 aa	Predicted RBP	4.88	□□□□□ -1.63
VTA1	YLR181C	YGL108C	P53139	140 aa		4.88	□□□□□ -1.63
VTA1	YLR181C	MNP1	P53163	194 aa	Predicted RBP	4.88	□□□□□ -1.63
VTA1	YLR181C	YGR250C	P53316	781 aa	Known RBP	4.88	□□□□□ -1.63
VTA1	YLR181C	RBS1	Q05672	457 aa	Known RBP	4.88	□□□□□ -1.63
VTA1	YLR181C	VTA1	Q06263	330 aa		4.88	□□□□□ -1.63
VTA1	YLR181C	NUP188	P52593	1655 aa	Known RBP	4.87	□□□□□ -1.63
VTA1	YLR181C	BUD14	P27637	709 aa		4.87	□□□□□ -1.63
VTA1	YLR181C	RAD14	P28519	371 aa		4.87	□□□□□ -1.63
VTA1	YLR181C	AFG1	P32317	509 aa		4.87	□□□□□ -1.63
VTA1	YLR181C	ATP11	P32453	318 aa		4.87	□□□□□ -1.63
VTA1	YLR181C	HXT3	P32466	567 aa	Known RBP	4.87	□□□□□ -1.63
VTA1	YLR181C	FRE1	P32791	686 aa		4.87	□□□□□ -1.63
VTA1	YLR181C	IKS1	P47042	667 aa		4.87	□□□□□ -1.63
VTA1	YLR181C	YGR149W	P48236	432 aa		4.87	□□□□□ -1.63
VTA1	YLR181C	GPI1	P53306	609 aa		4.87	□□□□□ -1.63
VTA1	YLR181C	RPA49	Q01080	415 aa	Predicted RBP	4.87	□□□□□ -1.63
VTA1	YLR181C	CFT2	Q12102	859 aa	Predicted RBP	4.87	□□□□□ -1.63
VTA1	YLR181C	LSP1	Q12230	341 aa	Known RBP	4.87	□□□□□ -1.63
VTA1	YLR181C	IML1	P47170	1584 aa		4.87	□□□□□ -1.63
VTA1	YLR181C	CAR1	P00812	333 aa	Known RBP	4.86	□□□□□ -1.63
VTA1	YLR181C	AMD1	P15274	810 aa	Known RBP	4.86	□□□□□ -1.63
VTA1	YLR181C	PPH22	P23595	377 aa		4.86	□□□□□ -1.63
VTA1	YLR181C	PPZ1	P26570	692 aa		4.86	□□□□□ -1.63
VTA1	YLR181C	SIP2	P34164	415 aa	Known RBP	4.86	□□□□□ -1.63
VTA1	YLR181C	POP1	P41812	875 aa		4.86	□□□□□ -1.63
VTA1	YLR181C	DLD2	P46681	530 aa	Known RBP	4.86	□□□□□ -1.63
VTA1	YLR181C	BNA5	Q05979	453 aa		4.86	□□□□□ -1.63
VTA1	YLR181C	SYO1	Q07395	620 aa		4.86	□□□□□ -1.63
VTA1	YLR181C	YRF1-4	O13559	1382 aa		4.86	□□□□□ -1.63
VTA1	YLR181C	GLK1	P17709	500 aa	Known RBP	4.85	□□□□□ -1.63
VTA1	YLR181C	YMR147W	P40218	223 aa	Known RBP	4.85	□□□□□ -1.63
VTA1	YLR181C	YJL070C	P40361	888 aa		4.85	□□□□□ -1.63
VTA1	YLR181C	RLI1	Q03195	608 aa	Known RBP	4.85	□□□□□ -1.63
VTA1	YLR181C	MRPL51	Q06090	140 aa	Predicted RBP	4.85	□□□□□ -1.63
VTA1	YLR181C	DAP1	Q12091	152 aa		4.85	□□□□□ -1.63
VTA1	YLR181C	YDL009C	Q12210	107 aa		4.85	□□□□□ -1.63
VTA1	YLR181C	RHO2	P06781	192 aa		4.84	□□□□□ -1.63
VTA1	YLR181C	SPS4	P09937	338 aa		4.84	□□□□□ -1.63
VTA1	YLR181C	IDH2	P28241	369 aa	Known RBP	4.84	□□□□□ -1.63
VTA1	YLR181C	HCS1	P34243	683 aa		4.84	□□□□□ -1.63
VTA1	YLR181C	TUL1	P36096	758 aa		4.84	□□□□□ -1.63
VTA1	YLR181C	SYG1	P40528	902 aa		4.84	□□□□□ -1.63
VTA1	YLR181C	VMA13	P41807	478 aa	Known RBP	4.84	□□□□□ -1.63
VTA1	YLR181C	MRS3	P10566	314 aa		4.83	□□□□□ -1.64
VTA1	YLR181C	CLC1	P17891	233 aa		4.83	□□□□□ -1.64
VTA1	YLR181C	EXO70	P19658	623 aa		4.83	□□□□□ -1.64
VTA1	YLR181C	REC107	P21651	314 aa		4.83	□□□□□ -1.64
VTA1	YLR181C	RPC53	P25441	422 aa		4.83	□□□□□ -1.64
VTA1	YLR181C	YIM1	P28625	365 aa		4.83	□□□□□ -1.64
VTA1	YLR181C	PTR2	P32901	601 aa		4.83	□□□□□ -1.64
VTA1	YLR181C	CBP4	P37267	147 aa		4.83	□□□□□ -1.64
VTA1	YLR181C	SSU1	P41930	458 aa		4.83	□□□□□ -1.64
VTA1	YLR181C	URB2	P47108	1174 aa		4.83	□□□□□ -1.64
VTA1	YLR181C	IRC15	Q02733	499 aa		4.83	□□□□□ -1.64
VTA1	YLR181C	GIR2	Q03768	265 aa	Predicted RBP	4.83	□□□□□ -1.64
VTA1	YLR181C	KEL3	Q08979	651 aa	Predicted RBP	4.83	□□□□□ -1.64
VTA1	YLR181C	RKM5	Q12367	367 aa		4.83	□□□□□ -1.64
VTA1	YLR181C	PDX1	P16451	410 aa		4.82	□□□□□ -1.64
VTA1	YLR181C	ATP10	P18496	279 aa		4.82	□□□□□ -1.64
VTA1	YLR181C	FUN19	P28003	413 aa	Predicted RBP	4.82	□□□□□ -1.64
VTA1	YLR181C	NDC1	P32500	655 aa		4.82	□□□□□ -1.64
VTA1	YLR181C	GCS1	P35197	352 aa		4.82	□□□□□ -1.64
VTA1	YLR181C	RTT107	P38850	1070 aa		4.82	□□□□□ -1.64
VTA1	YLR181C	YAT2	P40017	923 aa		4.82	□□□□□ -1.64
VTA1	YLR181C	RMD9	P53140	646 aa	Known RBP	4.82	□□□□□ -1.64
VTA1	YLR181C	RPM2	Q02773	1202 aa		4.82	□□□□□ -1.64
VTA1	YLR181C	ARX1	Q03862	593 aa	Known RBP	4.82	□□□□□ -1.64
VTA1	YLR181C	SIL1	Q08199	421 aa		4.82	□□□□□ -1.64
VTA1	YLR181C	NDD1	Q08887	554 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms