RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C NMD4Q12129 218 aa4.3□□□□□ -1.72
SED5YLR026C RLM1Q12224 676 aa4.3□□□□□ -1.72
SED5YLR026C RKM5Q12367 367 aa4.3□□□□□ -1.72
SED5YLR026C HAP1P0CE41 1502 aa4.3□□□□□ -1.72
SED5YLR026C MES1P00958 751 aaKnown RBP4.29□□□□□ -1.72
SED5YLR026C GLK1P17709 500 aaKnown RBP4.29□□□□□ -1.72
SED5YLR026C LDB16P25587 256 aa4.29□□□□□ -1.72
SED5YLR026C TCD2P36101 447 aaKnown RBP4.29□□□□□ -1.72
SED5YLR026C DED81P38707 554 aaKnown RBP4.29□□□□□ -1.72
SED5YLR026C FLC2P39719 783 aa4.29□□□□□ -1.72
SED5YLR026C ELP2P42935 788 aa4.29□□□□□ -1.72
SED5YLR026C YGL242CP53066 181 aa4.29□□□□□ -1.72
SED5YLR026C RBG2P53295 368 aaKnown RBP4.29□□□□□ -1.72
SED5YLR026C HEF3P53978 1044 aaKnown RBP4.29□□□□□ -1.72
SED5YLR026C RBS1Q05672 457 aaKnown RBP4.29□□□□□ -1.72
SED5YLR026C DPB3P27344 201 aa4.28□□□□□ -1.72
SED5YLR026C YOR387CQ08910 206 aa4.28□□□□□ -1.72
SED5YLR026C SEC53P07283 254 aaKnown RBP4.27□□□□□ -1.73
SED5YLR026C PAH1P32567 862 aa4.27□□□□□ -1.73
SED5YLR026C MRP4P32902 394 aa4.27□□□□□ -1.73
SED5YLR026C RFS1P38234 210 aaKnown RBP4.27□□□□□ -1.73
SED5YLR026C PIR3Q03180 325 aa4.27□□□□□ -1.73
SED5YLR026C ENT1Q12518 454 aa4.27□□□□□ -1.73
SED5YLR026C COR1P07256 457 aa4.26□□□□□ -1.73
SED5YLR026C PRP2P20095 876 aaPredicted RBP4.26□□□□□ -1.73
SED5YLR026C PAP1P29468 568 aaKnown RBP4.26□□□□□ -1.73
SED5YLR026C YDR056CQ12025 205 aa4.26□□□□□ -1.73
SED5YLR026C GAL80P04387 435 aa4.25□□□□□ -1.73
SED5YLR026C LPD1P09624 499 aaKnown RBP4.25□□□□□ -1.73
SED5YLR026C AAC3P18238 307 aa4.25□□□□□ -1.73
SED5YLR026C YME1P32795 747 aa4.25□□□□□ -1.73
SED5YLR026C KEL1P38853 1164 aaKnown RBP4.25□□□□□ -1.73
SED5YLR026C CAT8P39113 1433 aa4.25□□□□□ -1.73
SED5YLR026C FAU1P40099 211 aa4.25□□□□□ -1.73
SED5YLR026C VID27P40157 782 aa4.25□□□□□ -1.73
SED5YLR026C YIL067CP40514 678 aa4.25□□□□□ -1.73
SED5YLR026C KEL3Q08979 651 aaPredicted RBP4.25□□□□□ -1.73
SED5YLR026C YJR112W-AQ3E743 109 aa4.25□□□□□ -1.73
SED5YLR026C VMR1P38735 1592 aa4.24□□□□□ -1.73
SED5YLR026C CHS1P08004 1131 aa4.24□□□□□ -1.73
SED5YLR026C NAM9P27929 486 aa4.24□□□□□ -1.73
SED5YLR026C FRE2P36033 711 aa4.24□□□□□ -1.73
SED5YLR026C REG2P38232 338 aa4.24□□□□□ -1.73
SED5YLR026C MBB1P39534 108 aa4.24□□□□□ -1.73
SED5YLR026C MRX6P48564 524 aa4.24□□□□□ -1.73
SED5YLR026C AVT4P50944 713 aa4.24□□□□□ -1.73
SED5YLR026C ARK1P53974 638 aa4.24□□□□□ -1.73
SED5YLR026C VPS38Q05919 439 aa4.24□□□□□ -1.73
SED5YLR026C SEM1O94742 89 aa4.23□□□□□ -1.73
SED5YLR026C HIP1P06775 603 aa4.23□□□□□ -1.73
SED5YLR026C BUB3P26449 341 aa4.23□□□□□ -1.73
SED5YLR026C PEP3P27801 918 aa4.23□□□□□ -1.73
SED5YLR026C DEG1P31115 442 aaKnown RBP4.23□□□□□ -1.73
SED5YLR026C NDT80P38830 627 aa4.23□□□□□ -1.73
SED5YLR026C GCD10P41814 478 aa4.23□□□□□ -1.73
SED5YLR026C UPF3P48412 387 aaKnown RBP4.23□□□□□ -1.73
SED5YLR026C CTI6Q08923 506 aa4.23□□□□□ -1.73
SED5YLR026C RCN2Q12044 265 aa4.23□□□□□ -1.73
SED5YLR026C ATP11P32453 318 aa4.22□□□□□ -1.73
SED5YLR026C YEL045CP32616 141 aa4.22□□□□□ -1.73
SED5YLR026C NOP16P40007 231 aaKnown RBP4.22□□□□□ -1.73
SED5YLR026C AVL9Q12500 764 aa4.22□□□□□ -1.73
SED5YLR026C SPT15P13393 240 aaKnown RBP4.21□□□□□ -1.74
SED5YLR026C CBS1P14066 229 aa4.21□□□□□ -1.74
SED5YLR026C NDI1P32340 513 aa4.21□□□□□ -1.74
SED5YLR026C WBP1P33767 430 aaKnown RBP4.21□□□□□ -1.74
SED5YLR026C YBL059WP34224 193 aa4.21□□□□□ -1.74
SED5YLR026C RSM22P36056 628 aa4.21□□□□□ -1.74
SED5YLR026C PRE5P40302 234 aaKnown RBP4.21□□□□□ -1.74
SED5YLR026C DOT5P40553 215 aa4.21□□□□□ -1.74
SED5YLR026C POP1P41812 875 aa4.21□□□□□ -1.74
SED5YLR026C YFL067WP43537 175 aa4.21□□□□□ -1.74
SED5YLR026C CAF130P53280 1122 aaPredicted RBP4.21□□□□□ -1.74
SED5YLR026C RRP12Q12754 1228 aaKnown RBP4.21□□□□□ -1.74
SED5YLR026C RAV1P47104 1357 aa4.21□□□□□ -1.74
SED5YLR026C YRF1-2P40105 1681 aa4.21□□□□□ -1.74
SED5YLR026C HSC82P15108 705 aaKnown RBP4.2□□□□□ -1.74
SED5YLR026C PRD1P25375 712 aa4.2□□□□□ -1.74
SED5YLR026C YIM1P28625 365 aa4.2□□□□□ -1.74
SED5YLR026C FAA2P39518 744 aa4.2□□□□□ -1.74
SED5YLR026C ERP2P39704 215 aa4.2□□□□□ -1.74
SED5YLR026C SYG1P40528 902 aa4.2□□□□□ -1.74
SED5YLR026C YGR066CP53242 292 aa4.2□□□□□ -1.74
SED5YLR026C CAF40P53829 373 aa4.2□□□□□ -1.74
SED5YLR026C ELP3Q02908 557 aaKnown RBP4.2□□□□□ -1.74
SED5YLR026C FIN1Q03898 291 aa4.2□□□□□ -1.74
SED5YLR026C HEL2Q05580 639 aaKnown RBP4.2□□□□□ -1.74
SED5YLR026C PBA1Q05778 276 aa4.2□□□□□ -1.74
SED5YLR026C THP3Q12049 470 aaKnown RBP4.2□□□□□ -1.74
SED5YLR026C HEM15P16622 393 aa4.19□□□□□ -1.74
SED5YLR026C SRO77P38163 1010 aa4.19□□□□□ -1.74
SED5YLR026C MUM2P38236 366 aa4.19□□□□□ -1.74
SED5YLR026C RRT5P43607 289 aa4.19□□□□□ -1.74
SED5YLR026C ART5P53244 586 aaKnown RBP4.19□□□□□ -1.74
SED5YLR026C MFB1Q04922 465 aa4.19□□□□□ -1.74
SED5YLR026C ERV2Q12284 196 aa4.19□□□□□ -1.74
SED5YLR026C OLE1P21147 510 aaKnown RBP4.18□□□□□ -1.74
SED5YLR026C GLC7P32598 312 aaKnown RBP4.18□□□□□ -1.74
SED5YLR026C MFT1P33441 392 aaKnown RBP4.18□□□□□ -1.74
SED5YLR026C PAD1P33751 242 aaKnown RBP RIP-Chip data4.18□□□□□ -1.74not detected
Retrieved 100 of 5,963 RNA–protein pairs in 35.3 ms