RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W CMK2P22517 447 aa7.21□□□□□ -1.26
SNF7YLR025W MNE1P24720 663 aa7.21□□□□□ -1.26
SNF7YLR025W CAD1P24813 409 aaKnown RBP7.21□□□□□ -1.26
SNF7YLR025W FUN30P31380 1131 aa7.21□□□□□ -1.26
SNF7YLR025W AAR2P32357 355 aaPredicted RBP7.21□□□□□ -1.26
SNF7YLR025W CDC5P32562 705 aa7.21□□□□□ -1.26
SNF7YLR025W SKG1P36169 355 aa7.21□□□□□ -1.26
SNF7YLR025W ROT2P38138 954 aa7.21□□□□□ -1.26
SNF7YLR025W FES1P38260 290 aa7.21□□□□□ -1.26
SNF7YLR025W HSE1P38753 452 aa7.21□□□□□ -1.26
SNF7YLR025W MSS2P40990 351 aa7.21□□□□□ -1.26
SNF7YLR025W GCD10P41814 478 aa7.21□□□□□ -1.26
SNF7YLR025W RBL2P48606 106 aaKnown RBP7.21□□□□□ -1.26
SNF7YLR025W NAS6P50086 228 aa7.21□□□□□ -1.26
SNF7YLR025W YPT32P51996 222 aaKnown RBP7.21□□□□□ -1.26
SNF7YLR025W CWC24P53769 259 aa7.21□□□□□ -1.26
SNF7YLR025W HXT15P54854 567 aa7.21□□□□□ -1.26
SNF7YLR025W SRL4Q03085 281 aa7.21□□□□□ -1.26
SNF7YLR025W EFR3Q03653 782 aaKnown RBP7.21□□□□□ -1.26
SNF7YLR025W YMR206WQ03695 313 aa7.21□□□□□ -1.26
SNF7YLR025W YDR132CQ03900 495 aa7.21□□□□□ -1.26
SNF7YLR025W PPN1Q04119 674 aa7.21□□□□□ -1.26
SNF7YLR025W BCH1Q05029 724 aa7.21□□□□□ -1.26
SNF7YLR025W YHC1Q05900 231 aaKnown RBP7.21□□□□□ -1.26
SNF7YLR025W SSQ1Q05931 657 aaPredicted RBP7.21□□□□□ -1.26
SNF7YLR025W COS7Q07788 383 aa7.21□□□□□ -1.26
SNF7YLR025W MSH5Q12175 901 aa7.21□□□□□ -1.26
SNF7YLR025W GTT2Q12390 233 aa7.21□□□□□ -1.26
SNF7YLR025W RMD5Q12508 421 aa7.21□□□□□ -1.26
SNF7YLR025W YLR149CQ99296 730 aa7.21□□□□□ -1.26
SNF7YLR025W ARG81P05085 880 aa7.2□□□□□ -1.26
SNF7YLR025W COR1P07256 457 aa7.2□□□□□ -1.26
SNF7YLR025W UGA1P17649 471 aa7.2□□□□□ -1.26
SNF7YLR025W ARF2P19146 181 aaKnown RBP7.2□□□□□ -1.26
SNF7YLR025W DMC1P25453 334 aa7.2□□□□□ -1.26
SNF7YLR025W UBC8P28263 218 aa7.2□□□□□ -1.26
SNF7YLR025W CRM1P30822 1084 aaKnown RBP7.2□□□□□ -1.26
SNF7YLR025W RPC82P32349 654 aa7.2□□□□□ -1.26
SNF7YLR025W TYE7P33122 291 aaPredicted RBP7.2□□□□□ -1.26
SNF7YLR025W RPT5P33297 434 aaKnown RBP7.2□□□□□ -1.26
SNF7YLR025W NNK1P36003 928 aa7.2□□□□□ -1.26
SNF7YLR025W VPS21P36017 210 aaKnown RBP7.2□□□□□ -1.26
SNF7YLR025W YHR218WP38899 603 aa7.2□□□□□ -1.26
SNF7YLR025W MPT5P39016 859 aaKnown RBP RIP-Chip data7.2□□□□□ -1.26not detected
SNF7YLR025W AYR1P40471 297 aa7.2□□□□□ -1.26
SNF7YLR025W VHR1P40522 640 aa7.2□□□□□ -1.26
SNF7YLR025W MEP2P41948 499 aa7.2□□□□□ -1.26
SNF7YLR025W AGP3P43548 558 aa7.2□□□□□ -1.26
SNF7YLR025W COG1P53079 417 aa7.2□□□□□ -1.26
SNF7YLR025W PXR1P53335 271 aaPredicted RBP7.2□□□□□ -1.26
SNF7YLR025W YNR068CP53754 272 aa7.2□□□□□ -1.26
SNF7YLR025W ELA1P53861 379 aaPredicted RBP7.2□□□□□ -1.26
SNF7YLR025W IDP3P53982 420 aaKnown RBP7.2□□□□□ -1.26
SNF7YLR025W IRC15Q02733 499 aa7.2□□□□□ -1.26
SNF7YLR025W PNG1Q02890 363 aa7.2□□□□□ -1.26
SNF7YLR025W RAD30Q04049 632 aa7.2□□□□□ -1.26
SNF7YLR025W RSC3Q06639 885 aa7.2□□□□□ -1.26
SNF7YLR025W YOL159CQ08300 171 aa7.2□□□□□ -1.26
SNF7YLR025W GPB1Q08886 897 aa7.2□□□□□ -1.26
SNF7YLR025W YOR387CQ08910 206 aa7.2□□□□□ -1.26
SNF7YLR025W YOR012WQ12351 137 aa7.2□□□□□ -1.26
SNF7YLR025W PFK27Q12471 397 aaPredicted RBP7.2□□□□□ -1.26
SNF7YLR025W BRR1Q99177 341 aaPredicted RBP7.2□□□□□ -1.26
SNF7YLR025W HXK2P04807 486 aaKnown RBP7.19□□□□□ -1.26
SNF7YLR025W GPH1P06738 902 aaKnown RBP7.19□□□□□ -1.26
SNF7YLR025W POL4P25615 582 aa7.19□□□□□ -1.26
SNF7YLR025W PTP2P29461 750 aa7.19□□□□□ -1.26
SNF7YLR025W NTG1P31378 399 aa7.19□□□□□ -1.26
SNF7YLR025W SAC1P32368 623 aaKnown RBP7.19□□□□□ -1.26
SNF7YLR025W TIP20P33891 701 aa7.19□□□□□ -1.26
SNF7YLR025W GLG1P36143 616 aa7.19□□□□□ -1.26
SNF7YLR025W GND1P38720 489 aaKnown RBP7.19□□□□□ -1.26
SNF7YLR025W LRP1P38801 184 aaKnown RBP7.19□□□□□ -1.26
SNF7YLR025W IES5P40060 125 aa7.19□□□□□ -1.26
SNF7YLR025W YRB2P40517 327 aa7.19□□□□□ -1.26
SNF7YLR025W YNL018CP53976 612 aa7.19□□□□□ -1.26
SNF7YLR025W ORC3P54790 616 aa7.19□□□□□ -1.26
SNF7YLR025W YDR239CQ03780 787 aa7.19□□□□□ -1.26
SNF7YLR025W ECM11Q04110 302 aa7.19□□□□□ -1.26
SNF7YLR025W CIA1Q05583 330 aa7.19□□□□□ -1.26
SNF7YLR025W GPI11Q06636 219 aa7.19□□□□□ -1.26
SNF7YLR025W GIC2Q06648 383 aa7.19□□□□□ -1.26
SNF7YLR025W HBT1Q07653 1046 aaKnown RBP7.19□□□□□ -1.26
SNF7YLR025W BUD7Q08754 746 aa7.19□□□□□ -1.26
SNF7YLR025W YPQ1Q12010 308 aa7.19□□□□□ -1.26
SNF7YLR025W YLR046CQ12253 270 aa7.19□□□□□ -1.26
SNF7YLR025W GLE1Q12315 538 aa7.19□□□□□ -1.26
SNF7YLR025W YOL159C-AQ3E769 90 aa7.19□□□□□ -1.26
SNF7YLR025W MHF2Q3E829 80 aa7.19□□□□□ -1.26
SNF7YLR025W VCX1Q99385 411 aa7.19□□□□□ -1.26
SNF7YLR025W DST1P07273 309 aa7.18□□□□□ -1.26
SNF7YLR025W RAP1P11938 827 aa7.18□□□□□ -1.26
SNF7YLR025W URE2P23202 354 aaKnown RBP7.18□□□□□ -1.26
SNF7YLR025W MKK2P32491 506 aa7.18□□□□□ -1.26
SNF7YLR025W SDH3P33421 198 aa7.18□□□□□ -1.26
SNF7YLR025W YCR087C-AP37263 153 aa7.18□□□□□ -1.26
SNF7YLR025W BMT2P38278 337 aa7.18□□□□□ -1.26
SNF7YLR025W PCL5P38794 229 aa7.18□□□□□ -1.26
SNF7YLR025W SWD1P39706 426 aa7.18□□□□□ -1.26
SNF7YLR025W EXO1P39875 702 aa7.18□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 39.9 ms