RNA–Protein interactions for RNA: YLL039C

UBI4, Transcript of Ubiquitin, yeastyeast

Gene UBI4, Length 1,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBI4YLL039C SHE9Q04172 456 aa4.42□□□□□ -1.7
UBI4YLL039C TDA5Q06417 326 aaKnown RBP4.42□□□□□ -1.7
UBI4YLL039C YFT2Q06676 274 aa4.42□□□□□ -1.7
UBI4YLL039C RTT10Q08924 1013 aa4.42□□□□□ -1.7
UBI4YLL039C TRM8Q12009 286 aa4.42□□□□□ -1.7
UBI4YLL039C MRH1Q12117 320 aaPredicted RBP4.42□□□□□ -1.7
UBI4YLL039C YMR030W-AQ3E760 96 aa4.42□□□□□ -1.7
UBI4YLL039C RGS2Q99188 309 aa4.42□□□□□ -1.7
UBI4YLL039C SEC53P07283 254 aaKnown RBP4.41□□□□□ -1.7
UBI4YLL039C GCY1P14065 312 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
UBI4YLL039C CMP2P14747 604 aa4.41□□□□□ -1.7
UBI4YLL039C VPS34P22543 875 aa4.41□□□□□ -1.7
UBI4YLL039C TRX2P22803 104 aaKnown RBP4.41□□□□□ -1.7
UBI4YLL039C YSR3P23501 404 aa4.41□□□□□ -1.7
UBI4YLL039C HSP30P25619 332 aa4.41□□□□□ -1.7
UBI4YLL039C NPL6P32832 435 aa4.41□□□□□ -1.7
UBI4YLL039C RIB7P33312 244 aa4.41□□□□□ -1.7
UBI4YLL039C TIP20P33891 701 aa4.41□□□□□ -1.7
UBI4YLL039C LST4P34239 828 aa4.41□□□□□ -1.7
UBI4YLL039C YHR020WP38708 688 aaKnown RBP4.41□□□□□ -1.7
UBI4YLL039C PEP8P40335 379 aa4.41□□□□□ -1.7
UBI4YLL039C YIL108WP40483 696 aaKnown RBP4.41□□□□□ -1.7
UBI4YLL039C BOL2P53082 120 aa4.41□□□□□ -1.7
UBI4YLL039C SLI1P53304 468 aa4.41□□□□□ -1.7
UBI4YLL039C SWS2P53937 143 aa4.41□□□□□ -1.7
UBI4YLL039C YMR209CQ03648 457 aa4.41□□□□□ -1.7
UBI4YLL039C TRM82Q03774 444 aa4.41□□□□□ -1.7
UBI4YLL039C TAF11Q04226 346 aa4.41□□□□□ -1.7
UBI4YLL039C YLL032CQ07834 825 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
UBI4YLL039C MEU1Q07938 337 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
UBI4YLL039C PLB3Q08108 686 aa4.41□□□□□ -1.7
UBI4YLL039C VHS3Q08438 674 aa4.41□□□□□ -1.7
UBI4YLL039C RPN8Q08723 338 aaKnown RBP4.41□□□□□ -1.7
UBI4YLL039C YLR053CQ12026 108 aa4.41□□□□□ -1.7
UBI4YLL039C UPC2Q12151 913 aa4.41□□□□□ -1.7
UBI4YLL039C RIB2Q12362 591 aaKnown RBP4.41□□□□□ -1.7
UBI4YLL039C ICT1Q12385 394 aa4.41□□□□□ -1.7
UBI4YLL039C TEL1P38110 2787 aa4.41□□□□□ -1.7
UBI4YLL039C PHO5P00635 467 aa4.4□□□□□ -1.71
UBI4YLL039C GCN3P14741 305 aa4.4□□□□□ -1.71
UBI4YLL039C NMT1P14743 455 aa4.4□□□□□ -1.71
UBI4YLL039C SRV2P17555 526 aaKnown RBP4.4□□□□□ -1.71
UBI4YLL039C SCL1P21243 252 aaKnown RBP4.4□□□□□ -1.71
UBI4YLL039C DPB2P24482 689 aaPredicted RBP4.4□□□□□ -1.71
UBI4YLL039C ERG6P25087 383 aaKnown RBP4.4□□□□□ -1.71
UBI4YLL039C AAD3P25612 363 aa4.4□□□□□ -1.71
UBI4YLL039C SPR1P32603 445 aa4.4□□□□□ -1.71
UBI4YLL039C UTH1P36135 365 aa4.4□□□□□ -1.71
UBI4YLL039C RPF2P36160 344 aaKnown RBP4.4□□□□□ -1.71
UBI4YLL039C MUM2P38236 366 aa4.4□□□□□ -1.71
UBI4YLL039C YBR242WP38331 238 aa4.4□□□□□ -1.71
UBI4YLL039C EFM1P38732 585 aa4.4□□□□□ -1.71
UBI4YLL039C MUP3P38734 546 aa4.4□□□□□ -1.71
UBI4YLL039C YJL206CP39529 758 aa4.4□□□□□ -1.71
UBI4YLL039C YHB1P39676 399 aaKnown RBP4.4□□□□□ -1.71
UBI4YLL039C YEL073CP39974 107 aa4.4□□□□□ -1.71
UBI4YLL039C MEP1P40260 492 aa4.4□□□□□ -1.71
UBI4YLL039C YPS6P40583 537 aa4.4□□□□□ -1.71
UBI4YLL039C DIM1P41819 318 aaKnown RBP4.4□□□□□ -1.71
UBI4YLL039C GAT1P43574 510 aa4.4□□□□□ -1.71
UBI4YLL039C FMP33P46998 180 aa4.4□□□□□ -1.71
UBI4YLL039C LIA1P47120 325 aaKnown RBP4.4□□□□□ -1.71
UBI4YLL039C BIR1P47134 954 aa4.4□□□□□ -1.71
UBI4YLL039C MIG2P53035 382 aa4.4□□□□□ -1.71
UBI4YLL039C TAF6P53040 516 aa4.4□□□□□ -1.71
UBI4YLL039C CLD1P53264 445 aa4.4□□□□□ -1.71
UBI4YLL039C COS6P53344 381 aa4.4□□□□□ -1.71
UBI4YLL039C SUN4P53616 420 aa4.4□□□□□ -1.71
UBI4YLL039C ZRG17P53735 605 aa4.4□□□□□ -1.71
UBI4YLL039C YNL058CP53947 316 aa4.4□□□□□ -1.71
UBI4YLL039C RSM24Q03976 319 aa4.4□□□□□ -1.71
UBI4YLL039C CSN9Q03981 162 aa4.4□□□□□ -1.71
UBI4YLL039C HPT1Q04178 221 aaKnown RBP4.4□□□□□ -1.71
UBI4YLL039C SSL1Q04673 461 aaPredicted RBP4.4□□□□□ -1.71
UBI4YLL039C RCO1Q04779 684 aa4.4□□□□□ -1.71
UBI4YLL039C CRN1Q06440 651 aa4.4□□□□□ -1.71
UBI4YLL039C RSC3Q06639 885 aa4.4□□□□□ -1.71
UBI4YLL039C GRS2Q06817 618 aa4.4□□□□□ -1.71
UBI4YLL039C VAM6Q07468 1049 aa4.4□□□□□ -1.71
UBI4YLL039C RSA1Q08932 381 aa4.4□□□□□ -1.71
UBI4YLL039C RKM1Q08961 583 aaPredicted RBP4.4□□□□□ -1.71
UBI4YLL039C UBX3Q12229 455 aa4.4□□□□□ -1.71
UBI4YLL039C RUP1Q12242 671 aa4.4□□□□□ -1.71
UBI4YLL039C GPR1Q12361 961 aa4.4□□□□□ -1.71
UBI4YLL039C YGR161W-CQ3E744 92 aa4.4□□□□□ -1.71
UBI4YLL039C BRR2P32639 2163 aaKnown RBP4.39□□□□□ -1.71
UBI4YLL039C FUM1P08417 488 aaKnown RBP4.39□□□□□ -1.71
UBI4YLL039C YAR066WP0CX18 203 aa4.39□□□□□ -1.71
UBI4YLL039C YHR214WP0CX19 203 aa4.39□□□□□ -1.71
UBI4YLL039C REC107P21651 314 aa4.39□□□□□ -1.71
UBI4YLL039C PPH21P23594 369 aa4.39□□□□□ -1.71
UBI4YLL039C MEF1P25039 761 aa4.39□□□□□ -1.71
UBI4YLL039C YCR016WP25617 290 aaKnown RBP4.39□□□□□ -1.71
UBI4YLL039C PHA2P32452 334 aa4.39□□□□□ -1.71
UBI4YLL039C PTM1P32857 523 aa4.39□□□□□ -1.71
UBI4YLL039C ASK1P35734 292 aa4.39□□□□□ -1.71
UBI4YLL039C YPT52P36018 234 aaKnown RBP4.39□□□□□ -1.71
UBI4YLL039C FCY21P40039 528 aa4.39□□□□□ -1.71
UBI4YLL039C SER3P40054 469 aa4.39□□□□□ -1.71
UBI4YLL039C LSM5P40089 93 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms