RNA–Protein interactions for RNA: YKR097W

PCK1, Transcript of Phosphoenolpyruvate carboxykinase, yeastyeast

Gene PCK1, Length 1,650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCK1YKR097W RFC3P38629 340 aa2.78□□□□□ -1.96
PCK1YKR097W FMS1P50264 508 aa2.78□□□□□ -1.96
PCK1YKR097W RMD9P53140 646 aaKnown RBP2.78□□□□□ -1.96
PCK1YKR097W DON1Q05610 365 aa2.78□□□□□ -1.96
PCK1YKR097W DAP1Q12091 152 aa2.78□□□□□ -1.96
PCK1YKR097W SMC6Q12749 1114 aa2.78□□□□□ -1.96
PCK1YKR097W LEU4P06208 619 aaKnown RBP2.77□□□□□ -1.97
PCK1YKR097W EXO70P19658 623 aa2.77□□□□□ -1.97
PCK1YKR097W ATS1P31386 333 aa2.77□□□□□ -1.97
PCK1YKR097W LOS1P33418 1100 aaPredicted RBP2.77□□□□□ -1.97
PCK1YKR097W HAT2P39984 401 aa2.77□□□□□ -1.97
PCK1YKR097W RMT2Q03305 412 aa2.77□□□□□ -1.97
PCK1YKR097W RRP45Q05636 305 aaKnown RBP2.77□□□□□ -1.97
PCK1YKR097W VPS74Q06385 345 aa2.77□□□□□ -1.97
PCK1YKR097W ISA2Q12425 185 aa2.77□□□□□ -1.97
PCK1YKR097W CAR1P00812 333 aaKnown RBP2.76□□□□□ -1.97
PCK1YKR097W RPL15AP05748 204 aaKnown RBP2.76□□□□□ -1.97
PCK1YKR097W CLB1P24868 471 aa2.76□□□□□ -1.97
PCK1YKR097W ERV1P27882 189 aa2.76□□□□□ -1.97
PCK1YKR097W NDC1P32500 655 aa2.76□□□□□ -1.97
PCK1YKR097W PTR2P32901 601 aa2.76□□□□□ -1.97
PCK1YKR097W EBP2P36049 427 aaKnown RBP2.76□□□□□ -1.97
PCK1YKR097W NTC20P38302 140 aaPredicted RBP2.76□□□□□ -1.97
PCK1YKR097W VHC1P38329 1120 aa2.76□□□□□ -1.97
PCK1YKR097W RTT101P47050 842 aa2.76□□□□□ -1.97
PCK1YKR097W YGL138CP53122 345 aa2.76□□□□□ -1.97
PCK1YKR097W RSC1P53236 928 aa2.76□□□□□ -1.97
PCK1YKR097W NCS2P53923 493 aaPredicted RBP2.76□□□□□ -1.97
PCK1YKR097W HSP31Q04432 237 aa2.76□□□□□ -1.97
PCK1YKR097W ERP1Q05359 219 aaKnown RBP2.76□□□□□ -1.97
PCK1YKR097W MDM30Q05930 598 aa2.76□□□□□ -1.97
PCK1YKR097W CPR2P23285 205 aa2.76□□□□□ -1.97
PCK1YKR097W SIN4P32259 974 aa2.76□□□□□ -1.97
PCK1YKR097W SPC110P32380 944 aa2.76□□□□□ -1.97
PCK1YKR097W FRE2P36033 711 aa2.76□□□□□ -1.97
PCK1YKR097W CBP4P37267 147 aa2.76□□□□□ -1.97
PCK1YKR097W ARA1P38115 344 aa2.76□□□□□ -1.97
PCK1YKR097W SRP72P38688 640 aaKnown RBP2.76□□□□□ -1.97
PCK1YKR097W RTT107P38850 1070 aa2.76□□□□□ -1.97
PCK1YKR097W DHH1P39517 506 aaKnown RBP2.76□□□□□ -1.97
PCK1YKR097W RPR2P40571 144 aa2.76□□□□□ -1.97
PCK1YKR097W MEP2P41948 499 aa2.76□□□□□ -1.97
PCK1YKR097W CAK1P43568 368 aaPredicted RBP2.76□□□□□ -1.97
PCK1YKR097W TCB2P48231 1178 aa2.76□□□□□ -1.97
PCK1YKR097W SKO1Q02100 647 aa2.76□□□□□ -1.97
PCK1YKR097W RKM1Q08961 583 aaPredicted RBP2.76□□□□□ -1.97
PCK1YKR097W MTC4P38335 694 aaKnown RBP2.75□□□□□ -1.97
PCK1YKR097W ISC1P40015 477 aaKnown RBP2.75□□□□□ -1.97
PCK1YKR097W SHO1P40073 367 aa2.75□□□□□ -1.97
PCK1YKR097W SAS2P40963 338 aa2.75□□□□□ -1.97
PCK1YKR097W GCD10P41814 478 aa2.75□□□□□ -1.97
PCK1YKR097W ZIM17P42844 174 aa2.75□□□□□ -1.97
PCK1YKR097W RPS0BP46654 252 aaKnown RBP2.75□□□□□ -1.97
PCK1YKR097W TRS85P46944 698 aa2.75□□□□□ -1.97
PCK1YKR097W GWT1P47026 490 aa2.75□□□□□ -1.97
PCK1YKR097W COS10P52924 374 aa2.75□□□□□ -1.97
PCK1YKR097W ARK1P53974 638 aa2.75□□□□□ -1.97
PCK1YKR097W YMR317WQ04893 1140 aa2.75□□□□□ -1.97
PCK1YKR097W AYT1Q12226 474 aa2.75□□□□□ -1.97
PCK1YKR097W VAM3Q12241 283 aa2.75□□□□□ -1.97
PCK1YKR097W MTF1P14908 341 aaKnown RBP2.74□□□□□ -1.97
PCK1YKR097W KRE2P27809 442 aa2.74□□□□□ -1.97
PCK1YKR097W HIR2P32480 875 aa2.74□□□□□ -1.97
PCK1YKR097W TFB1P32776 642 aa2.74□□□□□ -1.97
PCK1YKR097W REC114P32841 428 aa2.74□□□□□ -1.97
PCK1YKR097W PXA2P34230 853 aa2.74□□□□□ -1.97
PCK1YKR097W LRP1P38801 184 aaKnown RBP2.74□□□□□ -1.97
PCK1YKR097W RPH1P39956 796 aa2.74□□□□□ -1.97
PCK1YKR097W ELP2P42935 788 aa2.74□□□□□ -1.97
PCK1YKR097W YJR011CP47086 261 aaPredicted RBP2.74□□□□□ -1.97
PCK1YKR097W ECM27P47144 725 aa2.74□□□□□ -1.97
PCK1YKR097W RPT4P53549 437 aaKnown RBP2.74□□□□□ -1.97
PCK1YKR097W ACL4Q03771 387 aa2.74□□□□□ -1.97
PCK1YKR097W YDR387CQ04162 555 aa2.74□□□□□ -1.97
PCK1YKR097W HSP42Q12329 375 aa2.74□□□□□ -1.97
PCK1YKR097W CYB2P00175 591 aa2.73□□□□□ -1.97
PCK1YKR097W YML002WP0CF17 737 aa2.73□□□□□ -1.97
PCK1YKR097W ATR1P13090 542 aa2.73□□□□□ -1.97
PCK1YKR097W RRT2P38332 387 aa2.73□□□□□ -1.97
PCK1YKR097W ART5P53244 586 aaKnown RBP2.73□□□□□ -1.97
PCK1YKR097W PNG1Q02890 363 aa2.73□□□□□ -1.97
PCK1YKR097W HOT1Q03213 719 aa2.73□□□□□ -1.97
PCK1YKR097W AIM32Q04689 311 aa2.73□□□□□ -1.97
PCK1YKR097W MMR1Q06324 491 aa2.73□□□□□ -1.97
PCK1YKR097W SET6Q12529 373 aa2.73□□□□□ -1.97
PCK1YKR097W YLR278CQ05854 1341 aa2.73□□□□□ -1.97
PCK1YKR097W MDH1P17505 334 aaKnown RBP RIP-Chip data2.73□□□□□ -1.97not detected
PCK1YKR097W RHB1P25378 209 aa2.73□□□□□ -1.97
PCK1YKR097W YCR100CP25606 316 aa2.73□□□□□ -1.97
PCK1YKR097W BEM1P29366 551 aa2.73□□□□□ -1.97
PCK1YKR097W ECM25P32525 599 aa2.73□□□□□ -1.97
PCK1YKR097W CAB3P36076 571 aa2.73□□□□□ -1.97
PCK1YKR097W APE3P37302 537 aaKnown RBP2.73□□□□□ -1.97
PCK1YKR097W SLM4P38247 162 aa2.73□□□□□ -1.97
PCK1YKR097W YAT2P40017 923 aa2.73□□□□□ -1.97
PCK1YKR097W SER3P40054 469 aa2.73□□□□□ -1.97
PCK1YKR097W RRT5P43607 289 aa2.73□□□□□ -1.97
PCK1YKR097W OGG1P53397 376 aaPredicted RBP2.73□□□□□ -1.97
PCK1YKR097W YIF1P53845 314 aaKnown RBP2.73□□□□□ -1.97
PCK1YKR097W DSL1P53847 754 aa2.73□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms