RNA–Protein interactions for RNA: YJL173C

RFA3, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeastyeast

Gene RFA3, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFA3YJL173C IDH2P28241 369 aaKnown RBP3.54□□□□□ -1.84
RFA3YJL173C GLC7P32598 312 aaKnown RBP3.54□□□□□ -1.84
RFA3YJL173C NAT2P37293 288 aa3.54□□□□□ -1.84
RFA3YJL173C OTU2P38747 307 aaKnown RBP3.54□□□□□ -1.84
RFA3YJL173C YGR149WP48236 432 aa3.54□□□□□ -1.84
RFA3YJL173C RMD9P53140 646 aaKnown RBP3.54□□□□□ -1.84
RFA3YJL173C POP6P53218 158 aa3.54□□□□□ -1.84
RFA3YJL173C NCS2P53923 493 aaPredicted RBP3.54□□□□□ -1.84
RFA3YJL173C PNG1Q02890 363 aa3.54□□□□□ -1.84
RFA3YJL173C REV1P12689 985 aa3.53□□□□□ -1.84
RFA3YJL173C HEM15P16622 393 aa3.53□□□□□ -1.84
RFA3YJL173C DEG1P31115 442 aaKnown RBP3.53□□□□□ -1.84
RFA3YJL173C GYP6P32806 458 aa3.53□□□□□ -1.84
RFA3YJL173C YMR147WP40218 223 aaKnown RBP3.53□□□□□ -1.84
RFA3YJL173C JJJ1P53863 590 aa3.53□□□□□ -1.84
RFA3YJL173C ARK1P53974 638 aa3.53□□□□□ -1.84
RFA3YJL173C ODC1Q03028 310 aa3.53□□□□□ -1.84
RFA3YJL173C TAP42Q04372 366 aa3.53□□□□□ -1.84
RFA3YJL173C RRN11Q04712 507 aa3.53□□□□□ -1.84
RFA3YJL173C RQC1Q05468 723 aaKnown RBP3.53□□□□□ -1.84
RFA3YJL173C HEL2Q05580 639 aaKnown RBP3.53□□□□□ -1.84
RFA3YJL173C TSR2Q06672 205 aaKnown RBP3.53□□□□□ -1.84
RFA3YJL173C YER078W-AQ3E7A2 54 aa3.53□□□□□ -1.84
RFA3YJL173C MET17P06106 444 aa3.52□□□□□ -1.85
RFA3YJL173C SPS4P09937 338 aa3.52□□□□□ -1.85
RFA3YJL173C NOP1P15646 327 aaKnown RBP3.52□□□□□ -1.85
RFA3YJL173C ATP10P18496 279 aa3.52□□□□□ -1.85
RFA3YJL173C YBL059WP34224 193 aa3.52□□□□□ -1.85
RFA3YJL173C SWH1P35845 1188 aa3.52□□□□□ -1.85
RFA3YJL173C THI2P38141 450 aa3.52□□□□□ -1.85
RFA3YJL173C NDT80P38830 627 aa3.52□□□□□ -1.85
RFA3YJL173C NDE1P40215 560 aa3.52□□□□□ -1.85
RFA3YJL173C RRT5P43607 289 aa3.52□□□□□ -1.85
RFA3YJL173C IRC6P43615 237 aa3.52□□□□□ -1.85
RFA3YJL173C DSL1P53847 754 aa3.52□□□□□ -1.85
RFA3YJL173C GIR2Q03768 265 aaPredicted RBP3.52□□□□□ -1.85
RFA3YJL173C SMA2Q04658 369 aa3.52□□□□□ -1.85
RFA3YJL173C YOR387CQ08910 206 aa3.52□□□□□ -1.85
RFA3YJL173C YPL199CQ08954 240 aa3.52□□□□□ -1.85
RFA3YJL173C SPT15P13393 240 aaKnown RBP3.51□□□□□ -1.85
RFA3YJL173C CKA1P15790 372 aa3.51□□□□□ -1.85
RFA3YJL173C RPN12P32496 274 aa3.51□□□□□ -1.85
RFA3YJL173C PAD1P33751 242 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
RFA3YJL173C SMF1P38925 575 aa3.51□□□□□ -1.85
RFA3YJL173C YIL067CP40514 678 aa3.51□□□□□ -1.85
RFA3YJL173C VTC2P43585 828 aa3.51□□□□□ -1.85
RFA3YJL173C MRPL19P53875 158 aa3.51□□□□□ -1.85
RFA3YJL173C IBD2P53892 351 aa3.51□□□□□ -1.85
RFA3YJL173C ESA1Q08649 445 aa3.51□□□□□ -1.85
RFA3YJL173C MUM3Q08750 479 aa3.51□□□□□ -1.85
RFA3YJL173C RRP12Q12754 1228 aaKnown RBP3.51□□□□□ -1.85
RFA3YJL173C HHF1P02309 103 aaKnown RBP3.5□□□□□ -1.85
RFA3YJL173C RPL3P14126 387 aaKnown RBP3.5□□□□□ -1.85
RFA3YJL173C NAB3P38996 802 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
RFA3YJL173C ESL1P40456 1118 aa3.5□□□□□ -1.85
RFA3YJL173C ART5P53244 586 aaKnown RBP3.5□□□□□ -1.85
RFA3YJL173C PCP1P53259 346 aa3.5□□□□□ -1.85
RFA3YJL173C MRP51Q02950 344 aa3.5□□□□□ -1.85
RFA3YJL173C PBA1Q05778 276 aa3.5□□□□□ -1.85
RFA3YJL173C THP3Q12049 470 aaKnown RBP3.5□□□□□ -1.85
RFA3YJL173C GRX6Q12438 231 aa3.5□□□□□ -1.85
RFA3YJL173C CHS1P08004 1131 aa3.49□□□□□ -1.85
RFA3YJL173C SAM1P10659 382 aaKnown RBP3.49□□□□□ -1.85
RFA3YJL173C SAM2P19358 384 aaKnown RBP3.49□□□□□ -1.85
RFA3YJL173C ROX1P25042 368 aa3.49□□□□□ -1.85
RFA3YJL173C NIP100P33420 868 aa3.49□□□□□ -1.85
RFA3YJL173C YCR041WP37265 110 aa3.49□□□□□ -1.85
RFA3YJL173C TFG2P41896 400 aaPredicted RBP3.49□□□□□ -1.85
RFA3YJL173C TRS85P46944 698 aa3.49□□□□□ -1.85
RFA3YJL173C SSN8P47821 323 aa3.49□□□□□ -1.85
RFA3YJL173C MNP1P53163 194 aaPredicted RBP3.49□□□□□ -1.85
RFA3YJL173C GOR1P53839 350 aa3.49□□□□□ -1.85
RFA3YJL173C COG4Q06096 861 aa3.49□□□□□ -1.85
RFA3YJL173C YLR108CQ12259 485 aa3.49□□□□□ -1.85
RFA3YJL173C INH1P01097 85 aa3.48□□□□□ -1.85
RFA3YJL173C PPH22P23595 377 aa3.48□□□□□ -1.85
RFA3YJL173C CPR4P25334 318 aa3.48□□□□□ -1.85
RFA3YJL173C NAM9P27929 486 aa3.48□□□□□ -1.85
RFA3YJL173C YIP1P53039 248 aa3.48□□□□□ -1.85
RFA3YJL173C ELP3Q02908 557 aaKnown RBP3.48□□□□□ -1.85
RFA3YJL173C YDR387CQ04162 555 aa3.48□□□□□ -1.85
RFA3YJL173C HSP31Q04432 237 aa3.48□□□□□ -1.85
RFA3YJL173C VTA1Q06263 330 aa3.48□□□□□ -1.85
RFA3YJL173C RRD2Q12461 358 aa3.48□□□□□ -1.85
RFA3YJL173C RTP1Q12751 981 aa3.48□□□□□ -1.85
RFA3YJL173C YLR278CQ05854 1341 aa3.47□□□□□ -1.85
RFA3YJL173C GPH1P06738 902 aaKnown RBP3.47□□□□□ -1.85
RFA3YJL173C RED1P14291 827 aa3.47□□□□□ -1.85
RFA3YJL173C RPI1P23250 407 aaKnown RBP3.47□□□□□ -1.85
RFA3YJL173C APE2P32454 952 aaKnown RBP3.47□□□□□ -1.85
RFA3YJL173C PRP21P32524 280 aaPredicted RBP3.47□□□□□ -1.85
RFA3YJL173C SDH3P33421 198 aa3.47□□□□□ -1.85
RFA3YJL173C VHC1P38329 1120 aa3.47□□□□□ -1.85
RFA3YJL173C LAM5P43560 674 aa3.47□□□□□ -1.85
RFA3YJL173C WWM1P43582 211 aaKnown RBP3.47□□□□□ -1.85
RFA3YJL173C SHE10P53075 577 aa3.47□□□□□ -1.85
RFA3YJL173C BTN2P53286 410 aa3.47□□□□□ -1.85
RFA3YJL173C RTN2Q12443 393 aa3.47□□□□□ -1.85
RFA3YJL173C CLB3P24870 427 aa3.46□□□□□ -1.86
RFA3YJL173C SPS22P25380 463 aa3.46□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms