RNA–Protein interactions for RNA: YJL104W

PAM16, Transcript of Subunit of the import motor (PAM complex), yeast

Gene PAM16, Length 450 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM16	YJL104W	PNG1	Q02890	363 aa		1.13	□□□□□ -2.23
PAM16	YJL104W	SYO1	Q07395	620 aa		1.13	□□□□□ -2.23
PAM16	YJL104W	IWR1	Q07532	353 aa	Predicted RBP	1.13	□□□□□ -2.23
PAM16	YJL104W	RFM1	Q12192	310 aa		1.13	□□□□□ -2.23
PAM16	YJL104W	IRA2	P19158	3079 aa		1.12	□□□□□ -2.23
PAM16	YJL104W	POL2	P21951	2222 aa	Known RBP	1.12	□□□□□ -2.23
PAM16	YJL104W	IPP1	P00817	287 aa	Known RBP	1.12	□□□□□ -2.23
PAM16	YJL104W	RPS14A	P06367	137 aa	Known RBP	1.12	□□□□□ -2.23
PAM16	YJL104W	PIF1	P07271	859 aa		1.12	□□□□□ -2.23
PAM16	YJL104W	PWP2	P25635	923 aa	Known RBP	1.12	□□□□□ -2.23
PAM16	YJL104W	CYM1	P32898	989 aa		1.12	□□□□□ -2.23
PAM16	YJL104W	SDH3	P33421	198 aa		1.12	□□□□□ -2.23
PAM16	YJL104W	TCD2	P36101	447 aa	Known RBP	1.12	□□□□□ -2.23
PAM16	YJL104W	CHK1	P38147	527 aa		1.12	□□□□□ -2.23
PAM16	YJL104W	RXT2	P38255	430 aa		1.12	□□□□□ -2.23
PAM16	YJL104W	PHO88	P38264	188 aa	Predicted RBP	1.12	□□□□□ -2.23
PAM16	YJL104W	YHL026C	P38740	315 aa		1.12	□□□□□ -2.23
PAM16	YJL104W	FSH1	P38777	243 aa	Known RBP	1.12	□□□□□ -2.23
PAM16	YJL104W	TVP23	P38962	199 aa		1.12	□□□□□ -2.23
PAM16	YJL104W	RPS14B	P39516	138 aa	Known RBP	1.12	□□□□□ -2.23
PAM16	YJL104W	PES4	P39684	611 aa		1.12	□□□□□ -2.23
PAM16	YJL104W	CHS6	P40955	746 aa		1.12	□□□□□ -2.23
PAM16	YJL104W	MAD3	P47074	515 aa		1.12	□□□□□ -2.23
PAM16	YJL104W	LSB1	P53281	241 aa		1.12	□□□□□ -2.23
PAM16	YJL104W	MRPL51	Q06090	140 aa	Predicted RBP	1.12	□□□□□ -2.23
PAM16	YJL104W	MRD1	Q06106	887 aa	Known RBP	1.12	□□□□□ -2.23
PAM16	YJL104W	YPL272C	Q08984	517 aa		1.12	□□□□□ -2.23
PAM16	YJL104W	YPL278C	Q08990	100 aa		1.12	□□□□□ -2.23
PAM16	YJL104W	ERP3	Q12403	225 aa		1.12	□□□□□ -2.23
PAM16	YJL104W	MPD2	Q99316	277 aa		1.12	□□□□□ -2.23
PAM16	YJL104W	IRA1	P18963	3092 aa		1.12	□□□□□ -2.23
PAM16	YJL104W	RAD3	P06839	778 aa		1.11	□□□□□ -2.23
PAM16	YJL104W	PRE8	P23639	250 aa		1.11	□□□□□ -2.23
PAM16	YJL104W	BRF1	P29056	596 aa		1.11	□□□□□ -2.23
PAM16	YJL104W	GPI10	P30777	616 aa		1.11	□□□□□ -2.23
PAM16	YJL104W	VPH1	P32563	840 aa	Known RBP	1.11	□□□□□ -2.23
PAM16	YJL104W	TFC3	P34111	1160 aa		1.11	□□□□□ -2.23
PAM16	YJL104W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	1.11	□□□□□ -2.23	not detected
PAM16	YJL104W	MCR1	P36060	302 aa	Known RBP	1.11	□□□□□ -2.23
PAM16	YJL104W	PIM1	P36775	1133 aa		1.11	□□□□□ -2.23
PAM16	YJL104W	MUM2	P38236	366 aa		1.11	□□□□□ -2.23
PAM16	YJL104W	YBR071W	P38243	211 aa		1.11	□□□□□ -2.23
PAM16	YJL104W	VPS45	P38932	577 aa		1.11	□□□□□ -2.23
PAM16	YJL104W	UME6	P39001	836 aa		1.11	□□□□□ -2.23
PAM16	YJL104W	DSN1	P40568	576 aa		1.11	□□□□□ -2.23
PAM16	YJL104W	RPS7B	P48164	190 aa	Known RBP	1.11	□□□□□ -2.23
PAM16	YJL104W	RSM10	Q03201	203 aa		1.11	□□□□□ -2.23
PAM16	YJL104W	RSN1	Q03516	953 aa		1.11	□□□□□ -2.23
PAM16	YJL104W	INM2	Q05533	292 aa		1.11	□□□□□ -2.23
PAM16	YJL104W	SPH1	Q06160	661 aa		1.11	□□□□□ -2.23
PAM16	YJL104W	VPS74	Q06385	345 aa		1.11	□□□□□ -2.23
PAM16	YJL104W	TSR1	Q07381	788 aa	Known RBP	1.11	□□□□□ -2.23
PAM16	YJL104W	BRE1	Q07457	700 aa	Known RBP	1.11	□□□□□ -2.23
PAM16	YJL104W	YRM1	Q12340	786 aa		1.11	□□□□□ -2.23
PAM16	YJL104W	PRM7	Q12459	698 aa		1.11	□□□□□ -2.23
PAM16	YJL104W	DUR1,2	P32528	1835 aa	Known RBP	1.1	□□□□□ -2.23
PAM16	YJL104W	ATP1	P07251	545 aa	Known RBP	1.1	□□□□□ -2.23
PAM16	YJL104W	PUT2	P07275	575 aa		1.1	□□□□□ -2.23
PAM16	YJL104W	MRP7	P12687	371 aa		1.1	□□□□□ -2.23
PAM16	YJL104W	DAL5	P15365	543 aa		1.1	□□□□□ -2.23
PAM16	YJL104W	DAL82	P21705	255 aa		1.1	□□□□□ -2.23
PAM16	YJL104W	SWI4	P25302	1093 aa	Known RBP	1.1	□□□□□ -2.23
PAM16	YJL104W	CPR4	P25334	318 aa		1.1	□□□□□ -2.23
PAM16	YJL104W	CDC15	P27636	974 aa		1.1	□□□□□ -2.23
PAM16	YJL104W	CSE2	P33308	149 aa		1.1	□□□□□ -2.23
PAM16	YJL104W	SHP1	P34223	423 aa		1.1	□□□□□ -2.23
PAM16	YJL104W	SEF1	P34228	1148 aa		1.1	□□□□□ -2.23
PAM16	YJL104W	SRX1	P36077	127 aa		1.1	□□□□□ -2.23
PAM16	YJL104W	ANS1	P38832	159 aa		1.1	□□□□□ -2.23
PAM16	YJL104W	HAT2	P39984	401 aa		1.1	□□□□□ -2.23
PAM16	YJL104W	HMF1	P40037	129 aa	Known RBP	1.1	□□□□□ -2.23
PAM16	YJL104W	TPM2	P40414	161 aa		1.1	□□□□□ -2.23
PAM16	YJL104W	DPB11	P47027	764 aa	Predicted RBP	1.1	□□□□□ -2.23
PAM16	YJL104W	PYK2	P52489	506 aa	Known RBP	1.1	□□□□□ -2.23
PAM16	YJL104W	YNL050C	P53952	270 aa		1.1	□□□□□ -2.23
PAM16	YJL104W	PEX25	Q02969	394 aa		1.1	□□□□□ -2.23
PAM16	YJL104W	ECM11	Q04110	302 aa		1.1	□□□□□ -2.23
PAM16	YJL104W	YMR321C	Q04898	105 aa		1.1	□□□□□ -2.23
PAM16	YJL104W	YDR341C	Q05506	607 aa	Known RBP	1.1	□□□□□ -2.23
PAM16	YJL104W	HRI1	Q05905	244 aa	Known RBP	1.1	□□□□□ -2.23
PAM16	YJL104W	YLR456W	Q06199	204 aa		1.1	□□□□□ -2.23
PAM16	YJL104W	MLC2	Q06580	163 aa		1.1	□□□□□ -2.23
PAM16	YJL104W	VIP1	Q06685	1146 aa	Known RBP	1.1	□□□□□ -2.23
PAM16	YJL104W	YOR097C	Q12274	175 aa	Predicted RBP	1.1	□□□□□ -2.23
PAM16	YJL104W	HIF1	Q12373	385 aa		1.1	□□□□□ -2.23
PAM16	YJL104W	SEC39	Q12745	709 aa		1.1	□□□□□ -2.23
PAM16	YJL104W	CSF1	Q12150	2958 aa		1.09	□□□□□ -2.23
PAM16	YJL104W	ATP2	P00830	511 aa	Known RBP	1.09	□□□□□ -2.23
PAM16	YJL104W	ARG81	P05085	880 aa		1.09	□□□□□ -2.23
PAM16	YJL104W	MIS1	P09440	975 aa	Known RBP	1.09	□□□□□ -2.23
PAM16	YJL104W	POL30	P15873	258 aa	Known RBP	1.09	□□□□□ -2.23
PAM16	YJL104W	SRB5	P32585	307 aa		1.09	□□□□□ -2.23
PAM16	YJL104W	HEL1	P36113	551 aa		1.09	□□□□□ -2.23
PAM16	YJL104W	DUG2	P38149	878 aa		1.09	□□□□□ -2.23
PAM16	YJL104W	BAT1	P38891	393 aa	Known RBP	1.09	□□□□□ -2.23
PAM16	YJL104W	FAU1	P40099	211 aa		1.09	□□□□□ -2.23
PAM16	YJL104W	LAM5	P43560	674 aa		1.09	□□□□□ -2.23
PAM16	YJL104W	COQ5	P49017	307 aa		1.09	□□□□□ -2.23
PAM16	YJL104W	ASE1	P50275	885 aa		1.09	□□□□□ -2.23
PAM16	YJL104W	NUP84	P52891	726 aa		1.09	□□□□□ -2.23

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms