RNA–Protein interactions for RNA: YIL135C

VHS2, Transcript of Regulator of septin dynamics, yeast

Gene VHS2, Length 1,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHS2	YIL135C	DCR2	Q05924	578 aa		4.94	□□□□□ -1.62
VHS2	YIL135C	FMP45	Q07651	309 aa		4.94	□□□□□ -1.62
VHS2	YIL135C	BUD7	Q08754	746 aa		4.94	□□□□□ -1.62
VHS2	YIL135C	HSP33	Q08914	237 aa	Known RBP	4.94	□□□□□ -1.62
VHS2	YIL135C	HSP32	Q08992	237 aa		4.94	□□□□□ -1.62
VHS2	YIL135C	SRO7	Q12038	1033 aa		4.94	□□□□□ -1.62
VHS2	YIL135C	AEP3	Q12089	606 aa		4.94	□□□□□ -1.62
VHS2	YIL135C	SWT1	Q12104	458 aa		4.94	□□□□□ -1.62
VHS2	YIL135C	YOL159C-A	Q3E769	90 aa		4.94	□□□□□ -1.62
VHS2	YIL135C	YOS9	Q99220	542 aa		4.94	□□□□□ -1.62
VHS2	YIL135C	HRP1	Q99383	534 aa	Known RBP	4.94	□□□□□ -1.62
VHS2	YIL135C	FAB1	P34756	2278 aa		4.93	□□□□□ -1.62
VHS2	YIL135C	RPL6B	P05739	176 aa	Known RBP	4.93	□□□□□ -1.62
VHS2	YIL135C	RPS24A	P0CX31	135 aa	Known RBP	4.93	□□□□□ -1.62
VHS2	YIL135C	RPS24B	P0CX32	135 aa	Known RBP	4.93	□□□□□ -1.62
VHS2	YIL135C	ARO3	P14843	370 aa	Known RBP	4.93	□□□□□ -1.62
VHS2	YIL135C	TAL1	P15019	335 aa	Known RBP	4.93	□□□□□ -1.62
VHS2	YIL135C	SPE2	P21182	396 aa		4.93	□□□□□ -1.62
VHS2	YIL135C	RNR1	P21524	888 aa	Known RBP	4.93	□□□□□ -1.62
VHS2	YIL135C	YCR051W	P25631	222 aa		4.93	□□□□□ -1.62
VHS2	YIL135C	IMG2	P25642	146 aa	Predicted RBP	4.93	□□□□□ -1.62
VHS2	YIL135C	NAM9	P27929	486 aa		4.93	□□□□□ -1.62
VHS2	YIL135C	MRPL10	P36520	322 aa		4.93	□□□□□ -1.62
VHS2	YIL135C	MAL32	P38158	584 aa		4.93	□□□□□ -1.62
VHS2	YIL135C	PCM1	P38628	557 aa	Known RBP	4.93	□□□□□ -1.62
VHS2	YIL135C	FMO1	P38866	432 aa		4.93	□□□□□ -1.62
VHS2	YIL135C	YFR018C	P43599	363 aa		4.93	□□□□□ -1.62
VHS2	YIL135C	IBA57	P47158	497 aa		4.93	□□□□□ -1.62
VHS2	YIL135C	CTF18	P49956	741 aa		4.93	□□□□□ -1.62
VHS2	YIL135C	RRT6	P53117	311 aa	Predicted RBP	4.93	□□□□□ -1.62
VHS2	YIL135C	YGL138C	P53122	345 aa		4.93	□□□□□ -1.62
VHS2	YIL135C	DUO1	P53168	247 aa	Known RBP	4.93	□□□□□ -1.62
VHS2	YIL135C	TIM21	P53220	239 aa		4.93	□□□□□ -1.62
VHS2	YIL135C	MAL12	P53341	584 aa		4.93	□□□□□ -1.62
VHS2	YIL135C	PRM1	P53835	661 aa		4.93	□□□□□ -1.62
VHS2	YIL135C	ECM9	Q02202	377 aa		4.93	□□□□□ -1.62
VHS2	YIL135C	RPL6A	Q02326	176 aa	Known RBP	4.93	□□□□□ -1.62
VHS2	YIL135C	IRC4	Q03036	179 aa		4.93	□□□□□ -1.62
VHS2	YIL135C	SRL4	Q03085	281 aa		4.93	□□□□□ -1.62
VHS2	YIL135C	WAR1	Q03631	944 aa		4.93	□□□□□ -1.62
VHS2	YIL135C	CTK1	Q03957	528 aa	Known RBP	4.93	□□□□□ -1.62
VHS2	YIL135C	ARO80	Q04052	950 aa		4.93	□□□□□ -1.62
VHS2	YIL135C	BNA7	Q04066	261 aa		4.93	□□□□□ -1.62
VHS2	YIL135C	COQ11	Q05892	277 aa		4.93	□□□□□ -1.62
VHS2	YIL135C	TFC6	Q06339	672 aa		4.93	□□□□□ -1.62
VHS2	YIL135C	ATG33	Q06485	197 aa		4.93	□□□□□ -1.62
VHS2	YIL135C	GET3	Q12154	354 aa	Known RBP	4.93	□□□□□ -1.62
VHS2	YIL135C	SKM1	Q12469	655 aa		4.93	□□□□□ -1.62
VHS2	YIL135C	GIT1	P25346	518 aa		4.92	□□□□□ -1.62
VHS2	YIL135C	ARO4	P32449	370 aa	Known RBP	4.92	□□□□□ -1.62
VHS2	YIL135C	HXT4	P32467	576 aa		4.92	□□□□□ -1.62
VHS2	YIL135C	CYM1	P32898	989 aa		4.92	□□□□□ -1.62
VHS2	YIL135C	GDT1	P38301	280 aa	Predicted RBP	4.92	□□□□□ -1.62
VHS2	YIL135C	TAE1	P38340	232 aa		4.92	□□□□□ -1.62
VHS2	YIL135C	YHR045W	P38775	560 aa		4.92	□□□□□ -1.62
VHS2	YIL135C	PSD1	P39006	500 aa		4.92	□□□□□ -1.62
VHS2	YIL135C	YER184C	P39961	794 aa		4.92	□□□□□ -1.62
VHS2	YIL135C	PUG1	P40100	303 aa		4.92	□□□□□ -1.62
VHS2	YIL135C	JLP2	P40206	208 aa		4.92	□□□□□ -1.62
VHS2	YIL135C	SOK1	P40317	901 aa		4.92	□□□□□ -1.62
VHS2	YIL135C	ICE2	P40499	491 aa		4.92	□□□□□ -1.62
VHS2	YIL135C	LIF1	P53150	421 aa		4.92	□□□□□ -1.62
VHS2	YIL135C	AQR1	P53943	586 aa		4.92	□□□□□ -1.62
VHS2	YIL135C	HMO1	Q03973	246 aa	Known RBP	4.92	□□□□□ -1.62
VHS2	YIL135C	PIG1	Q06216	648 aa		4.92	□□□□□ -1.62
VHS2	YIL135C	MCM21	Q06675	368 aa		4.92	□□□□□ -1.62
VHS2	YIL135C	ESA1	Q08649	445 aa		4.92	□□□□□ -1.62
VHS2	YIL135C	NUR1	Q12066	484 aa		4.92	□□□□□ -1.62
VHS2	YIL135C	UBX3	Q12229	455 aa		4.92	□□□□□ -1.62
VHS2	YIL135C	CTF3	Q12748	733 aa		4.92	□□□□□ -1.62
VHS2	YIL135C	YPR089W	O13585	888 aa		4.91	□□□□□ -1.62
VHS2	YIL135C	SIR3	P06701	978 aa		4.91	□□□□□ -1.62
VHS2	YIL135C	TUB1	P09733	447 aa	Known RBP	4.91	□□□□□ -1.62
VHS2	YIL135C	RPL1A	P0CX43	217 aa	Known RBP	4.91	□□□□□ -1.62
VHS2	YIL135C	RPL1B	P0CX44	217 aa	Known RBP	4.91	□□□□□ -1.62
VHS2	YIL135C	CDC24	P11433	854 aa	Predicted RBP	4.91	□□□□□ -1.62
VHS2	YIL135C	STE12	P13574	688 aa		4.91	□□□□□ -1.62
VHS2	YIL135C	CBS1	P14066	229 aa		4.91	□□□□□ -1.62
VHS2	YIL135C	CDC23	P16522	626 aa		4.91	□□□□□ -1.62
VHS2	YIL135C	RVS161	P25343	265 aa	Known RBP	4.91	□□□□□ -1.62
VHS2	YIL135C	PEP3	P27801	918 aa		4.91	□□□□□ -1.62
VHS2	YIL135C	ERV1	P27882	189 aa		4.91	□□□□□ -1.62
VHS2	YIL135C	CRM1	P30822	1084 aa	Known RBP	4.91	□□□□□ -1.62
VHS2	YIL135C	ZIP1	P31111	875 aa		4.91	□□□□□ -1.62
VHS2	YIL135C	YKL070W	P36087	169 aa		4.91	□□□□□ -1.62
VHS2	YIL135C	SFB3	P38810	929 aa		4.91	□□□□□ -1.62
VHS2	YIL135C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
VHS2	YIL135C	SOP4	P39543	234 aa	Predicted RBP	4.91	□□□□□ -1.62
VHS2	YIL135C	NUP60	P39705	539 aa		4.91	□□□□□ -1.62
VHS2	YIL135C	YIL092W	P40497	633 aa		4.91	□□□□□ -1.62
VHS2	YIL135C	UTP25	P40498	721 aa	Known RBP	4.91	□□□□□ -1.62
VHS2	YIL135C	MRX6	P48564	524 aa		4.91	□□□□□ -1.62
VHS2	YIL135C	DRN1	P53255	507 aa	Known RBP	4.91	□□□□□ -1.62
VHS2	YIL135C	HEF3	P53978	1044 aa	Known RBP	4.91	□□□□□ -1.62
VHS2	YIL135C	SLT2	Q00772	484 aa		4.91	□□□□□ -1.62
VHS2	YIL135C	BUD22	Q04347	519 aa	Known RBP	4.91	□□□□□ -1.62
VHS2	YIL135C	THI7	Q05998	598 aa		4.91	□□□□□ -1.62
VHS2	YIL135C	SKG3	Q06315	1026 aa		4.91	□□□□□ -1.62
VHS2	YIL135C	CUR1	Q06469	252 aa		4.91	□□□□□ -1.62
VHS2	YIL135C	VPS36	Q06696	566 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 75.1 ms