RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C PEX2P32800 271 aa3.06□□□□□ -1.92
RPN1YHR027C UGA4P32837 571 aa3.06□□□□□ -1.92
RPN1YHR027C RPT3P33298 428 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C HIS7P33734 552 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C BDF1P35817 686 aa3.06□□□□□ -1.92
RPN1YHR027C DHR2P36009 735 aaPredicted RBP3.06□□□□□ -1.92
RPN1YHR027C FMP23P38231 175 aa3.06□□□□□ -1.92
RPN1YHR027C PEX32P38292 413 aa3.06□□□□□ -1.92
RPN1YHR027C GEP4P38812 185 aa3.06□□□□□ -1.92
RPN1YHR027C GIP4P39732 760 aa3.06□□□□□ -1.92
RPN1YHR027C GIM4P40005 111 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C TY1A-JR2P47099 440 aa3.06□□□□□ -1.92
RPN1YHR027C YJR107WP47145 328 aa3.06□□□□□ -1.92
RPN1YHR027C RSM7P47150 247 aa3.06□□□□□ -1.92
RPN1YHR027C ART5P53244 586 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C CLD1P53264 445 aa3.06□□□□□ -1.92
RPN1YHR027C ARE2P53629 642 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C RCF2P53721 224 aa3.06□□□□□ -1.92
RPN1YHR027C SAM50P53969 484 aa3.06□□□□□ -1.92
RPN1YHR027C YPL107WQ02873 248 aa3.06□□□□□ -1.92
RPN1YHR027C RNY1Q02933 434 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C ERO1Q03103 563 aa3.06□□□□□ -1.92
RPN1YHR027C SNU56Q03782 492 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C TPP1Q03796 238 aa3.06□□□□□ -1.92
RPN1YHR027C TY1A-DR1Q03856 440 aa3.06□□□□□ -1.92
RPN1YHR027C MUS81Q04149 632 aaPredicted RBP3.06□□□□□ -1.92
RPN1YHR027C SMA2Q04658 369 aa3.06□□□□□ -1.92
RPN1YHR027C TY1A-ML1Q04706 440 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C YDR286CQ05530 114 aa3.06□□□□□ -1.92
RPN1YHR027C VPS74Q06385 345 aa3.06□□□□□ -1.92
RPN1YHR027C HDA3Q06623 655 aa3.06□□□□□ -1.92
RPN1YHR027C MRL1Q06815 381 aa3.06□□□□□ -1.92
RPN1YHR027C CUE5Q08412 411 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C SLF1Q12034 447 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C RTK1Q12100 620 aaPredicted RBP3.06□□□□□ -1.92
RPN1YHR027C TY1A-BRQ12217 440 aa3.06□□□□□ -1.92
RPN1YHR027C AHC1Q12433 566 aa3.06□□□□□ -1.92
RPN1YHR027C RRD2Q12461 358 aa3.06□□□□□ -1.92
RPN1YHR027C TY1A-NL2Q12470 440 aa3.06□□□□□ -1.92
RPN1YHR027C TY1A-GR2Q12485 440 aa3.06□□□□□ -1.92
RPN1YHR027C NBL1Q3E7Y6 73 aa3.06□□□□□ -1.92
RPN1YHR027C RIB3Q99258 208 aa3.06□□□□□ -1.92
RPN1YHR027C PMA1P05030 918 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C ATP1P07251 545 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C GCD1P09032 578 aaPredicted RBP3.06□□□□□ -1.92
RPN1YHR027C TY1A-LR4P0C2I8 440 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C TY1A-DR6P0CX70 440 aa3.06□□□□□ -1.92
RPN1YHR027C TY1A-ER1P0CX71 440 aa3.06□□□□□ -1.92
RPN1YHR027C TY1A-LR2P0CX72 440 aa3.06□□□□□ -1.92
RPN1YHR027C TY1A-PLP0CX73 440 aa3.06□□□□□ -1.92
RPN1YHR027C TY1A-JR1P0CX74 440 aa3.06□□□□□ -1.92
RPN1YHR027C TY1A-LR3P0CX75 440 aa3.06□□□□□ -1.92
RPN1YHR027C TY1A-ML2P0CX76 440 aa3.06□□□□□ -1.92
RPN1YHR027C ENA1P13587 1091 aa3.06□□□□□ -1.92
RPN1YHR027C MIP1P15801 1254 aa3.06□□□□□ -1.92
RPN1YHR027C SLY1P22213 666 aa3.06□□□□□ -1.92
RPN1YHR027C DAL3P32459 195 aa3.06□□□□□ -1.92
RPN1YHR027C SPO23P33757 523 aa3.06□□□□□ -1.92
RPN1YHR027C SHP1P34223 423 aa3.06□□□□□ -1.92
RPN1YHR027C OAR1P35731 278 aa3.06□□□□□ -1.92
RPN1YHR027C SPC34P36131 295 aa3.06□□□□□ -1.92
RPN1YHR027C RIM2P38127 377 aa3.06□□□□□ -1.92
RPN1YHR027C FTH1P38310 465 aa3.06□□□□□ -1.92
RPN1YHR027C HIS2P38635 335 aa3.06□□□□□ -1.92
RPN1YHR027C YHR182WP38870 785 aa3.06□□□□□ -1.92
RPN1YHR027C MLH1P38920 769 aa3.06□□□□□ -1.92
RPN1YHR027C RAD55P38953 406 aa3.06□□□□□ -1.92
RPN1YHR027C ACO2P39533 789 aa3.06□□□□□ -1.92
RPN1YHR027C IDP2P41939 412 aa3.06□□□□□ -1.92
RPN1YHR027C ZIM17P42844 174 aa3.06□□□□□ -1.92
RPN1YHR027C SER2P42941 309 aa3.06□□□□□ -1.92
RPN1YHR027C CCC1P47818 322 aa3.06□□□□□ -1.92
RPN1YHR027C ENA2Q01896 1091 aa3.06□□□□□ -1.92
RPN1YHR027C OYE2Q03558 400 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C CAC2Q04199 468 aa3.06□□□□□ -1.92
RPN1YHR027C RTT103Q05543 409 aa3.06□□□□□ -1.92
RPN1YHR027C MDM30Q05930 598 aa3.06□□□□□ -1.92
RPN1YHR027C YLR224WQ05947 369 aa3.06□□□□□ -1.92
RPN1YHR027C ISR1Q06098 443 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C DIB1Q06819 143 aaPredicted RBP3.06□□□□□ -1.92
RPN1YHR027C TY1A-GR1Q12085 440 aa3.06□□□□□ -1.92
RPN1YHR027C YOR022CQ12204 715 aa3.06□□□□□ -1.92
RPN1YHR027C RPN5Q12250 445 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C HAT1Q12341 374 aa3.06□□□□□ -1.92
RPN1YHR027C TRM10Q12400 293 aa3.06□□□□□ -1.92
RPN1YHR027C PNS1Q12412 539 aa3.06□□□□□ -1.92
RPN1YHR027C ENA5Q12691 1091 aa3.06□□□□□ -1.92
RPN1YHR027C YPL119C-AQ3E751 87 aa3.06□□□□□ -1.92
RPN1YHR027C TY1A-PR3Q6Q5H1 440 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C TY1A-OLQ92392 440 aaKnown RBP3.06□□□□□ -1.92
RPN1YHR027C REP2P03872 296 aa3.05□□□□□ -1.92
RPN1YHR027C KIN28P06242 306 aa3.05□□□□□ -1.92
RPN1YHR027C RPC40P07703 335 aaKnown RBP3.05□□□□□ -1.92
RPN1YHR027C FUM1P08417 488 aaKnown RBP3.05□□□□□ -1.92
RPN1YHR027C MET8P15807 274 aa3.05□□□□□ -1.92
RPN1YHR027C SIR1P21691 654 aa3.05□□□□□ -1.92
RPN1YHR027C DBP1P24784 617 aaKnown RBP3.05□□□□□ -1.92
RPN1YHR027C ATP11P32453 318 aa3.05□□□□□ -1.92
RPN1YHR027C RGT1P32862 1170 aa3.05□□□□□ -1.92
RPN1YHR027C LHP1P33399 275 aaKnown RBP3.05□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms