RNA–Protein interactions for RNA: YGR194C

XKS1, Transcript of Xylulokinase, yeast

Gene XKS1, Length 1,803 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
XKS1	YGR194C	SUC2	P00724	532 aa		4.26	□□□□□ -1.73
XKS1	YGR194C	ARG3	P05150	338 aa		4.26	□□□□□ -1.73
XKS1	YGR194C	ERG20	P08524	352 aa	Known RBP	4.26	□□□□□ -1.73
XKS1	YGR194C	SAM1	P10659	382 aa	Known RBP	4.26	□□□□□ -1.73
XKS1	YGR194C	KGD2	P19262	463 aa	Predicted RBP	4.26	□□□□□ -1.73
XKS1	YGR194C	KGD1	P20967	1014 aa	Known RBP	4.26	□□□□□ -1.73
XKS1	YGR194C	YSP3	P25036	478 aa		4.26	□□□□□ -1.73
XKS1	YGR194C	PHO84	P25297	587 aa	Known RBP	4.26	□□□□□ -1.73
XKS1	YGR194C	KIN82	P25341	720 aa		4.26	□□□□□ -1.73
XKS1	YGR194C	PTC6	P25646	442 aa		4.26	□□□□□ -1.73
XKS1	YGR194C	PPZ1	P26570	692 aa		4.26	□□□□□ -1.73
XKS1	YGR194C	ASF2	P32448	525 aa	Predicted RBP	4.26	□□□□□ -1.73
XKS1	YGR194C	MRS6	P32864	603 aa	Known RBP	4.26	□□□□□ -1.73
XKS1	YGR194C	MRP4	P32902	394 aa		4.26	□□□□□ -1.73
XKS1	YGR194C	REC104	P33323	182 aa		4.26	□□□□□ -1.73
XKS1	YGR194C	ECM13	P38195	257 aa		4.26	□□□□□ -1.73
XKS1	YGR194C	VID24	P38263	362 aa		4.26	□□□□□ -1.73
XKS1	YGR194C	ATG7	P38862	630 aa		4.26	□□□□□ -1.73
XKS1	YGR194C	YHR218W	P38899	603 aa		4.26	□□□□□ -1.73
XKS1	YGR194C	EAF5	P39995	279 aa		4.26	□□□□□ -1.73
XKS1	YGR194C	ZAP1	P47043	880 aa		4.26	□□□□□ -1.73
XKS1	YGR194C	MPS3	P47069	682 aa		4.26	□□□□□ -1.73
XKS1	YGR194C	MDE1	P47095	244 aa		4.26	□□□□□ -1.73
XKS1	YGR194C	STB4	P50104	949 aa		4.26	□□□□□ -1.73
XKS1	YGR194C	IMP4	P53941	290 aa	Known RBP	4.26	□□□□□ -1.73
XKS1	YGR194C	SLM2	P53955	656 aa		4.26	□□□□□ -1.73
XKS1	YGR194C	SVL3	Q03088	825 aa	Known RBP	4.26	□□□□□ -1.73
XKS1	YGR194C	SNU56	Q03782	492 aa	Known RBP	4.26	□□□□□ -1.73
XKS1	YGR194C	RAD33	Q04231	177 aa		4.26	□□□□□ -1.73
XKS1	YGR194C	SSL1	Q04673	461 aa	Predicted RBP	4.26	□□□□□ -1.73
XKS1	YGR194C	GPI11	Q06636	219 aa		4.26	□□□□□ -1.73
XKS1	YGR194C	ECM30	Q06673	1274 aa		4.26	□□□□□ -1.73
XKS1	YGR194C	NRT1	Q08485	598 aa		4.26	□□□□□ -1.73
XKS1	YGR194C	SLF1	Q12034	447 aa	Known RBP	4.26	□□□□□ -1.73
XKS1	YGR194C	ATP16	Q12165	160 aa		4.26	□□□□□ -1.73
XKS1	YGR194C	FMP16	Q12497	93 aa		4.26	□□□□□ -1.73
XKS1	YGR194C	MHF1	Q3E835	90 aa		4.26	□□□□□ -1.73
XKS1	YGR194C	HKR1	P41809	1802 aa		4.26	□□□□□ -1.73
XKS1	YGR194C	TIM9	O74700	87 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	FBP1	P09201	348 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	GIT1	P25346	518 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	ARE1	P25628	610 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	PRR1	P28708	518 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	STE14	P32584	239 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	NIC96	P34077	839 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	KTR4	P38131	464 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	ECM8	P38246	354 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	SRP68	P38687	599 aa	Known RBP	4.25	□□□□□ -1.73
XKS1	YGR194C	SRP72	P38688	640 aa	Known RBP	4.25	□□□□□ -1.73
XKS1	YGR194C	YLF2	P38746	405 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	YHI9	P38765	294 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	YEN1	P40028	759 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	MAF1	P41910	395 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	RRT5	P43607	289 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	ASG7	P46993	209 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	TIM54	P47045	478 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	RRT6	P53117	311 aa	Predicted RBP	4.25	□□□□□ -1.73
XKS1	YGR194C	MET13	P53128	600 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	CLD1	P53264	445 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	DID2	P69771	204 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
XKS1	YGR194C	UGO1	Q03327	502 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	RRP17	Q04031	235 aa	Predicted RBP	4.25	□□□□□ -1.73
XKS1	YGR194C	BCH1	Q05029	724 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	SAM4	Q08985	325 aa	Known RBP	4.25	□□□□□ -1.73
XKS1	YGR194C	RTR2	Q12378	196 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	ATG31	Q12421	196 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	LAS17	Q12446	633 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	PFK27	Q12471	397 aa	Predicted RBP	4.25	□□□□□ -1.73
XKS1	YGR194C	YOL159C-A	Q3E769	90 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	SAS5	Q99314	248 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	ASP3-2	P0CX77	362 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	ASP3-3	P0CX78	362 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	ASP3-4	P0CX79	362 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	ASP3-1	P0CZ17	362 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	CAP2	P13517	287 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	YCR090C	P25654	182 aa	Known RBP	4.25	□□□□□ -1.73
XKS1	YGR194C	SYN8	P31377	255 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	APE2	P32454	952 aa	Known RBP	4.25	□□□□□ -1.73
XKS1	YGR194C	NOP4	P37838	685 aa	Known RBP	4.25	□□□□□ -1.73
XKS1	YGR194C	ARA1	P38115	344 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	HSL7	P38274	827 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	BIT2	P38346	545 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	IPI1	P38803	334 aa	Predicted RBP	4.25	□□□□□ -1.73
XKS1	YGR194C	RPH1	P39956	796 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	ALD5	P40047	520 aa	Known RBP	4.25	□□□□□ -1.73
XKS1	YGR194C	COS4	P43542	379 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	GUF1	P46943	645 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	SNX4	P47057	423 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	HOC1	P47124	396 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	BIO3	P50277	480 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	DIA3	P52290	468 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	NHX1	Q04121	633 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	COX20	Q04935	205 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	ECM38	Q05902	660 aa	Predicted RBP	4.25	□□□□□ -1.73
XKS1	YGR194C	NEJ1	Q06148	342 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	SMF3	Q12078	473 aa	Predicted RBP	4.25	□□□□□ -1.73
XKS1	YGR194C	GTT2	Q12390	233 aa		4.25	□□□□□ -1.73
XKS1	YGR194C	MIS1	P09440	975 aa	Known RBP	4.24	□□□□□ -1.73
XKS1	YGR194C	RPL4A	P10664	362 aa	Known RBP	4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms