RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeastyeast

Gene PRE9, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE9YGR135W SUN4P53616 420 aa4.25□□□□□ -1.73
PRE9YGR135W ARK1P53974 638 aa4.25□□□□□ -1.73
PRE9YGR135W TIM8P57744 87 aa4.25□□□□□ -1.73
PRE9YGR135W FMP30Q02883 468 aa4.25□□□□□ -1.73
PRE9YGR135W SRL4Q03085 281 aa4.25□□□□□ -1.73
PRE9YGR135W YDR239CQ03780 787 aa4.25□□□□□ -1.73
PRE9YGR135W PLP1Q04004 230 aa4.25□□□□□ -1.73
PRE9YGR135W SMP3Q04174 516 aa4.25□□□□□ -1.73
PRE9YGR135W BUD22Q04347 519 aaKnown RBP4.25□□□□□ -1.73
PRE9YGR135W FMP42Q04991 504 aa4.25□□□□□ -1.73
PRE9YGR135W SUE1Q06524 206 aa4.25□□□□□ -1.73
PRE9YGR135W RPN8Q08723 338 aaKnown RBP4.25□□□□□ -1.73
PRE9YGR135W YBR085C-AO43137 85 aa4.24□□□□□ -1.73
PRE9YGR135W HEM1P09950 548 aaPredicted RBP4.24□□□□□ -1.73
PRE9YGR135W VMA2P16140 517 aaKnown RBP4.24□□□□□ -1.73
PRE9YGR135W THR1P17423 357 aaKnown RBP4.24□□□□□ -1.73
PRE9YGR135W URE2P23202 354 aaKnown RBP4.24□□□□□ -1.73
PRE9YGR135W SNT1P25357 1226 aa4.24□□□□□ -1.73
PRE9YGR135W YCR061WP25639 631 aa4.24□□□□□ -1.73
PRE9YGR135W TFC1P32367 649 aa4.24□□□□□ -1.73
PRE9YGR135W ETR1P38071 380 aa4.24□□□□□ -1.73
PRE9YGR135W VID24P38263 362 aa4.24□□□□□ -1.73
PRE9YGR135W MSR1P38714 643 aa4.24□□□□□ -1.73
PRE9YGR135W FMO1P38866 432 aa4.24□□□□□ -1.73
PRE9YGR135W PCF11P39081 626 aaPredicted RBP4.24□□□□□ -1.73
PRE9YGR135W MAF1P41910 395 aa4.24□□□□□ -1.73
PRE9YGR135W ROK1P45818 564 aaPredicted RBP4.24□□□□□ -1.73
PRE9YGR135W NUP84P52891 726 aa4.24□□□□□ -1.73
PRE9YGR135W HOS2P53096 452 aaPredicted RBP4.24□□□□□ -1.73
PRE9YGR135W MRM2P53123 320 aa4.24□□□□□ -1.73
PRE9YGR135W YGR066CP53242 292 aa4.24□□□□□ -1.73
PRE9YGR135W DSL1P53847 754 aa4.24□□□□□ -1.73
PRE9YGR135W GPI17Q04080 534 aa4.24□□□□□ -1.73
PRE9YGR135W MGR3Q04472 501 aa4.24□□□□□ -1.73
PRE9YGR135W COQ9Q05779 260 aa4.24□□□□□ -1.73
PRE9YGR135W ADE13Q05911 482 aaKnown RBP4.24□□□□□ -1.73
PRE9YGR135W ECM22Q05958 814 aaPredicted RBP4.24□□□□□ -1.73
PRE9YGR135W RGC1Q06108 1083 aaKnown RBP4.24□□□□□ -1.73
PRE9YGR135W CUR1Q06469 252 aa4.24□□□□□ -1.73
PRE9YGR135W DIB1Q06819 143 aaPredicted RBP4.24□□□□□ -1.73
PRE9YGR135W ASA1Q06822 443 aa4.24□□□□□ -1.73
PRE9YGR135W YDL114WQ07530 308 aa4.24□□□□□ -1.73
PRE9YGR135W YEH1Q07804 573 aa4.24□□□□□ -1.73
PRE9YGR135W CUE5Q08412 411 aaKnown RBP4.24□□□□□ -1.73
PRE9YGR135W FRE6Q12473 712 aa4.24□□□□□ -1.73
PRE9YGR135W RIM15P43565 1770 aa4.23□□□□□ -1.73
PRE9YGR135W DFR1P07807 211 aaKnown RBP RIP-Chip data4.23□□□□□ -1.73not detected
PRE9YGR135W LAT1P12695 482 aaKnown RBP4.23□□□□□ -1.73
PRE9YGR135W APE1P14904 514 aa4.23□□□□□ -1.73
PRE9YGR135W MDH1P17505 334 aaKnown RBP RIP-Chip data4.23□□□□□ -1.73not detected
PRE9YGR135W PRP28P23394 588 aa4.23□□□□□ -1.73
PRE9YGR135W RRP7P25368 297 aaPredicted RBP4.23□□□□□ -1.73
PRE9YGR135W TFB1P32776 642 aa4.23□□□□□ -1.73
PRE9YGR135W RPT5P33297 434 aaKnown RBP4.23□□□□□ -1.73
PRE9YGR135W TPO5P36029 618 aa4.23□□□□□ -1.73
PRE9YGR135W RCN1P36054 211 aa4.23□□□□□ -1.73
PRE9YGR135W CTP1P38152 299 aa4.23□□□□□ -1.73
PRE9YGR135W CST26P38226 397 aa4.23□□□□□ -1.73
PRE9YGR135W PCA1P38360 1216 aa4.23□□□□□ -1.73
PRE9YGR135W ERC1P38767 581 aa4.23□□□□□ -1.73
PRE9YGR135W VPS45P38932 577 aa4.23□□□□□ -1.73
PRE9YGR135W MKT1P40850 830 aaKnown RBP4.23□□□□□ -1.73
PRE9YGR135W CHS6P40955 746 aa4.23□□□□□ -1.73
PRE9YGR135W PHO86P46956 311 aa4.23□□□□□ -1.73
PRE9YGR135W YGL036WP53185 909 aaPredicted RBP4.23□□□□□ -1.73
PRE9YGR135W COG2P53271 262 aa4.23□□□□□ -1.73
PRE9YGR135W SLT2Q00772 484 aa4.23□□□□□ -1.73
PRE9YGR135W GIS1Q03833 894 aa4.23□□□□□ -1.73
PRE9YGR135W YET3Q07451 203 aa4.23□□□□□ -1.73
PRE9YGR135W BUD7Q08754 746 aa4.23□□□□□ -1.73
PRE9YGR135W YPL191CQ08930 360 aa4.23□□□□□ -1.73
PRE9YGR135W YDR018CQ12185 396 aa4.23□□□□□ -1.73
PRE9YGR135W HSP42Q12329 375 aa4.23□□□□□ -1.73
PRE9YGR135W AFI1Q99222 893 aa4.23□□□□□ -1.73
PRE9YGR135W CET1O13297 549 aaPredicted RBP4.22□□□□□ -1.73
PRE9YGR135W TY1B-AO13527 1196 aaKnown RBP4.22□□□□□ -1.73
PRE9YGR135W TEF1P02994 458 aaKnown RBP4.22□□□□□ -1.73
PRE9YGR135W BI2P03873 423 aa4.22□□□□□ -1.73
PRE9YGR135W GCN3P14741 305 aa4.22□□□□□ -1.73
PRE9YGR135W MSS116P15424 664 aaKnown RBP4.22□□□□□ -1.73
PRE9YGR135W SAM2P19358 384 aaKnown RBP4.22□□□□□ -1.73
PRE9YGR135W PDE1P22434 369 aa4.22□□□□□ -1.73
PRE9YGR135W UBA1P22515 1024 aaKnown RBP4.22□□□□□ -1.73
PRE9YGR135W DAL2P25335 343 aa4.22□□□□□ -1.73
PRE9YGR135W RPS5P26783 225 aaKnown RBP4.22□□□□□ -1.73
PRE9YGR135W URA7P28274 579 aaKnown RBP4.22□□□□□ -1.73
PRE9YGR135W RME1P32338 300 aaKnown RBP4.22□□□□□ -1.73
PRE9YGR135W SMI1P32566 505 aa4.22□□□□□ -1.73
PRE9YGR135W SRB5P32585 307 aa4.22□□□□□ -1.73
PRE9YGR135W SPR1P32603 445 aa4.22□□□□□ -1.73
PRE9YGR135W OCT1P35999 772 aa4.22□□□□□ -1.73
PRE9YGR135W AGP2P38090 596 aa4.22□□□□□ -1.73
PRE9YGR135W RIM2P38127 377 aa4.22□□□□□ -1.73
PRE9YGR135W KAP104P38217 918 aaKnown RBP4.22□□□□□ -1.73
PRE9YGR135W PFF1P38244 976 aa4.22□□□□□ -1.73
PRE9YGR135W GOS1P38736 223 aa4.22□□□□□ -1.73
PRE9YGR135W NDT80P38830 627 aa4.22□□□□□ -1.73
PRE9YGR135W PET100P38958 111 aa4.22□□□□□ -1.73
PRE9YGR135W DSE1P40077 573 aa4.22□□□□□ -1.73
PRE9YGR135W SEC24P40482 926 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms