RNA–Protein interactions for RNA: YGR109W-A

YGR109W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YGR109W-A, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-AYGR109W-A RRT5P43607 289 aa2.92□□□□□ -1.94
YGR109W-AYGR109W-A ART5P53244 586 aaKnown RBP2.92□□□□□ -1.94
YGR109W-AYGR109W-A MRD1Q06106 887 aaKnown RBP2.92□□□□□ -1.94
YGR109W-AYGR109W-A TMC1Q08422 150 aaPredicted RBP2.92□□□□□ -1.94
YGR109W-AYGR109W-A THP3Q12049 470 aaKnown RBP2.92□□□□□ -1.94
YGR109W-AYGR109W-A MRP7P12687 371 aa2.91□□□□□ -1.94
YGR109W-AYGR109W-A GPI10P30777 616 aa2.91□□□□□ -1.94
YGR109W-AYGR109W-A RPN12P32496 274 aa2.91□□□□□ -1.94
YGR109W-AYGR109W-A GLC7P32598 312 aaKnown RBP2.91□□□□□ -1.94
YGR109W-AYGR109W-A YMR147WP40218 223 aaKnown RBP2.91□□□□□ -1.94
YGR109W-AYGR109W-A IRC6P43615 237 aa2.91□□□□□ -1.94
YGR109W-AYGR109W-A PDS5Q04264 1277 aa2.91□□□□□ -1.94
YGR109W-AYGR109W-A ESA1Q08649 445 aa2.91□□□□□ -1.94
YGR109W-AYGR109W-A YDL007C-AQ2V2Q0 85 aa2.91□□□□□ -1.94
YGR109W-AYGR109W-A BRR1Q99177 341 aaPredicted RBP2.91□□□□□ -1.94
YGR109W-AYGR109W-A RPL31BP0C2H9 113 aaKnown RBP2.9□□□□□ -1.95
YGR109W-AYGR109W-A CKA1P15790 372 aa2.9□□□□□ -1.95
YGR109W-AYGR109W-A HXT1P32465 570 aa2.9□□□□□ -1.95
YGR109W-AYGR109W-A NAT2P37293 288 aa2.9□□□□□ -1.95
YGR109W-AYGR109W-A SWD3P38123 315 aa2.9□□□□□ -1.95
YGR109W-AYGR109W-A PTH1P38876 190 aaKnown RBP2.9□□□□□ -1.95
YGR109W-AYGR109W-A NAB3P38996 802 aaKnown RBP RIP-Chip data2.9□□□□□ -1.95not detected
YGR109W-AYGR109W-A ERP2P39704 215 aa2.9□□□□□ -1.95
YGR109W-AYGR109W-A MET18P40469 1032 aa2.9□□□□□ -1.95
YGR109W-AYGR109W-A SYG1P40528 902 aa2.9□□□□□ -1.95
YGR109W-AYGR109W-A POP1P41812 875 aa2.9□□□□□ -1.95
YGR109W-AYGR109W-A SDT1P53078 280 aa2.9□□□□□ -1.95
YGR109W-AYGR109W-A TWF1P53250 332 aa2.9□□□□□ -1.95
YGR109W-AYGR109W-A JJJ1P53863 590 aa2.9□□□□□ -1.95
YGR109W-AYGR109W-A MRPL19P53875 158 aa2.9□□□□□ -1.95
YGR109W-AYGR109W-A SLG1P54867 378 aa2.9□□□□□ -1.95
YGR109W-AYGR109W-A TAP42Q04372 366 aa2.9□□□□□ -1.95
YGR109W-AYGR109W-A RAV1P47104 1357 aa2.89□□□□□ -1.95
YGR109W-AYGR109W-A CLN3P13365 580 aa2.89□□□□□ -1.95
YGR109W-AYGR109W-A ISY1P21374 235 aaPredicted RBP2.89□□□□□ -1.95
YGR109W-AYGR109W-A CPR4P25334 318 aa2.89□□□□□ -1.95
YGR109W-AYGR109W-A ARO2P28777 376 aaKnown RBP2.89□□□□□ -1.95
YGR109W-AYGR109W-A VID24P38263 362 aa2.89□□□□□ -1.95
YGR109W-AYGR109W-A MTC6P38849 526 aa2.89□□□□□ -1.95
YGR109W-AYGR109W-A ARF3P40994 183 aaRIP-Chip data2.89□□□□□ -1.95not detected
YGR109W-AYGR109W-A POP6P53218 158 aa2.89□□□□□ -1.95
YGR109W-AYGR109W-A OGG1P53397 376 aaPredicted RBP2.89□□□□□ -1.95
YGR109W-AYGR109W-A KTR5P53966 522 aaPredicted RBP2.89□□□□□ -1.95
YGR109W-AYGR109W-A VPS72Q03388 795 aa2.89□□□□□ -1.95
YGR109W-AYGR109W-A MHR1Q06630 226 aa2.89□□□□□ -1.95
YGR109W-AYGR109W-A TSR2Q06672 205 aaKnown RBP2.89□□□□□ -1.95
YGR109W-AYGR109W-A MRPL35Q06678 367 aa2.89□□□□□ -1.95
YGR109W-AYGR109W-A RRG7Q08774 242 aaPredicted RBP2.89□□□□□ -1.95
YGR109W-AYGR109W-A RIM20Q12033 661 aa2.89□□□□□ -1.95
YGR109W-AYGR109W-A ATG29Q12092 213 aa2.89□□□□□ -1.95
YGR109W-AYGR109W-A GRX6Q12438 231 aa2.89□□□□□ -1.95
YGR109W-AYGR109W-A RRD2Q12461 358 aa2.89□□□□□ -1.95
YGR109W-AYGR109W-A SEC39Q12745 709 aa2.89□□□□□ -1.95
YGR109W-AYGR109W-A INH1P01097 85 aa2.88□□□□□ -1.95
YGR109W-AYGR109W-A ROX1P25042 368 aa2.88□□□□□ -1.95
YGR109W-AYGR109W-A CRM1P30822 1084 aaKnown RBP2.88□□□□□ -1.95
YGR109W-AYGR109W-A ISC1P40015 477 aaKnown RBP2.88□□□□□ -1.95
YGR109W-AYGR109W-A REE1P40893 198 aa2.88□□□□□ -1.95
YGR109W-AYGR109W-A GOR1P53839 350 aa2.88□□□□□ -1.95
YGR109W-AYGR109W-A TAF11Q04226 346 aa2.88□□□□□ -1.95
YGR109W-AYGR109W-A HRT3Q12347 344 aa2.88□□□□□ -1.95
YGR109W-AYGR109W-A YOL159C-AQ3E769 90 aa2.88□□□□□ -1.95
YGR109W-AYGR109W-A SUP35P05453 685 aaKnown RBP2.87□□□□□ -1.95
YGR109W-AYGR109W-A YCR100CP25606 316 aa2.87□□□□□ -1.95
YGR109W-AYGR109W-A CMC1P36064 111 aa2.87□□□□□ -1.95
YGR109W-AYGR109W-A SMF1P38925 575 aa2.87□□□□□ -1.95
YGR109W-AYGR109W-A URB2P47108 1174 aa2.87□□□□□ -1.95
YGR109W-AYGR109W-A TIS11P47977 285 aa2.87□□□□□ -1.95
YGR109W-AYGR109W-A YGL108CP53139 140 aa2.87□□□□□ -1.95
YGR109W-AYGR109W-A TOF1P53840 1238 aa2.87□□□□□ -1.95
YGR109W-AYGR109W-A MDM1Q01846 1127 aa2.87□□□□□ -1.95
YGR109W-AYGR109W-A TSR1Q07381 788 aaKnown RBP2.87□□□□□ -1.95
YGR109W-AYGR109W-A YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95not detected
YGR109W-AYGR109W-A RTP1Q12751 981 aa2.87□□□□□ -1.95
YGR109W-AYGR109W-A YML133CQ03099 1374 aa2.87□□□□□ -1.95
YGR109W-AYGR109W-A YLL067CQ07888 1374 aa2.87□□□□□ -1.95
YGR109W-AYGR109W-A YLL066CQ99208 1374 aa2.87□□□□□ -1.95
YGR109W-AYGR109W-A ADH2P00331 348 aaKnown RBP2.86□□□□□ -1.95
YGR109W-AYGR109W-A LEU4P06208 619 aaKnown RBP2.86□□□□□ -1.95
YGR109W-AYGR109W-A CDC31P06704 161 aaKnown RBP2.86□□□□□ -1.95
YGR109W-AYGR109W-A SPR1P32603 445 aa2.86□□□□□ -1.95
YGR109W-AYGR109W-A SDH3P33421 198 aa2.86□□□□□ -1.95
YGR109W-AYGR109W-A SEC66P33754 206 aa2.86□□□□□ -1.95
YGR109W-AYGR109W-A THI2P38141 450 aa2.86□□□□□ -1.95
YGR109W-AYGR109W-A VMA13P41807 478 aaKnown RBP2.86□□□□□ -1.95
YGR109W-AYGR109W-A HXT14P42833 540 aa2.86□□□□□ -1.95
YGR109W-AYGR109W-A OCA1P50946 238 aaPredicted RBP2.86□□□□□ -1.95
YGR109W-AYGR109W-A YGL039WP53183 348 aaKnown RBP2.86□□□□□ -1.95
YGR109W-AYGR109W-A IBD2P53892 351 aa2.86□□□□□ -1.95
YGR109W-AYGR109W-A YLR152CP54072 576 aa2.86□□□□□ -1.95
YGR109W-AYGR109W-A ODC1Q03028 310 aa2.86□□□□□ -1.95
YGR109W-AYGR109W-A YLR108CQ12259 485 aa2.86□□□□□ -1.95
YGR109W-AYGR109W-A PGA3Q12746 312 aaKnown RBP2.86□□□□□ -1.95
YGR109W-AYGR109W-A YAR066WP0CX18 203 aa2.85□□□□□ -1.95
YGR109W-AYGR109W-A YHR214WP0CX19 203 aa2.85□□□□□ -1.95
YGR109W-AYGR109W-A SPB1P25582 841 aaPredicted RBP2.85□□□□□ -1.95
YGR109W-AYGR109W-A AFG1P32317 509 aa2.85□□□□□ -1.95
YGR109W-AYGR109W-A ERG3P32353 365 aa2.85□□□□□ -1.95
YGR109W-AYGR109W-A MIX23P38162 196 aa2.85□□□□□ -1.95
YGR109W-AYGR109W-A TRS85P46944 698 aa2.85□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 43.8 ms