RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W VHC1P38329 1120 aa3.67□□□□□ -1.82
PRP18YGR006W MDM31P38880 579 aa3.67□□□□□ -1.82
PRP18YGR006W DHH1P39517 506 aaKnown RBP3.67□□□□□ -1.82
PRP18YGR006W ALG8P40351 577 aa3.67□□□□□ -1.82
PRP18YGR006W OGG1P53397 376 aaPredicted RBP3.67□□□□□ -1.82
PRP18YGR006W KAP120Q02932 1032 aa3.67□□□□□ -1.82
PRP18YGR006W ARX1Q03862 593 aaKnown RBP3.67□□□□□ -1.82
PRP18YGR006W DON1Q05610 365 aa3.67□□□□□ -1.82
PRP18YGR006W SIL1Q08199 421 aa3.67□□□□□ -1.82
PRP18YGR006W TIP41Q12199 356 aa3.67□□□□□ -1.82
PRP18YGR006W RKM5Q12367 367 aa3.67□□□□□ -1.82
PRP18YGR006W SET6Q12529 373 aa3.67□□□□□ -1.82
PRP18YGR006W ATR1P13090 542 aa3.66□□□□□ -1.82
PRP18YGR006W SRV2P17555 526 aaKnown RBP3.66□□□□□ -1.82
PRP18YGR006W YME2P32843 850 aa3.66□□□□□ -1.82
PRP18YGR006W STB6P36085 766 aa3.66□□□□□ -1.82
PRP18YGR006W PIM1P36775 1133 aa3.66□□□□□ -1.82
PRP18YGR006W RPH1P39956 796 aa3.66□□□□□ -1.82
PRP18YGR006W GWT1P47026 490 aa3.66□□□□□ -1.82
PRP18YGR006W COS5P47187 383 aa3.66□□□□□ -1.82
PRP18YGR006W SCS3P53012 380 aa3.66□□□□□ -1.82
PRP18YGR006W YGL260WP53056 76 aa3.66□□□□□ -1.82
PRP18YGR006W YGL138CP53122 345 aa3.66□□□□□ -1.82
PRP18YGR006W DSL1P53847 754 aa3.66□□□□□ -1.82
PRP18YGR006W YDR131CQ03899 556 aa3.66□□□□□ -1.82
PRP18YGR006W ROY1Q04847 553 aa3.66□□□□□ -1.82
PRP18YGR006W COS7Q07788 383 aa3.66□□□□□ -1.82
PRP18YGR006W RRD2Q12461 358 aa3.66□□□□□ -1.82
PRP18YGR006W RIP1P08067 215 aa3.65□□□□□ -1.83
PRP18YGR006W RPL20AP0CX23 172 aaKnown RBP3.65□□□□□ -1.83
PRP18YGR006W RPL20BP0CX24 172 aaPredicted RBP3.65□□□□□ -1.83
PRP18YGR006W CRM1P30822 1084 aaKnown RBP3.65□□□□□ -1.83
PRP18YGR006W PRP21P32524 280 aaPredicted RBP3.65□□□□□ -1.83
PRP18YGR006W FRE2P36033 711 aa3.65□□□□□ -1.83
PRP18YGR006W MTC4P38335 694 aaKnown RBP3.65□□□□□ -1.83
PRP18YGR006W HAT2P39984 401 aa3.65□□□□□ -1.83
PRP18YGR006W RPR2P40571 144 aa3.65□□□□□ -1.83
PRP18YGR006W SKO1Q02100 647 aa3.65□□□□□ -1.83
PRP18YGR006W PNG1Q02890 363 aa3.65□□□□□ -1.83
PRP18YGR006W RMT2Q03305 412 aa3.65□□□□□ -1.83
PRP18YGR006W HSP31Q04432 237 aa3.65□□□□□ -1.83
PRP18YGR006W PPT2Q12036 173 aa3.65□□□□□ -1.83
PRP18YGR006W AYT1Q12226 474 aa3.65□□□□□ -1.83
PRP18YGR006W ISA2Q12425 185 aa3.65□□□□□ -1.83
PRP18YGR006W AFI1Q99222 893 aa3.65□□□□□ -1.83
PRP18YGR006W SNT1P25357 1226 aa3.64□□□□□ -1.83
PRP18YGR006W TFB1P32776 642 aa3.64□□□□□ -1.83
PRP18YGR006W PMU1P36069 295 aa3.64□□□□□ -1.83
PRP18YGR006W FMP46P36141 133 aaKnown RBP3.64□□□□□ -1.83
PRP18YGR006W ISC1P40015 477 aaKnown RBP3.64□□□□□ -1.83
PRP18YGR006W YJL213WP40896 331 aa3.64□□□□□ -1.83
PRP18YGR006W YFR016CP43597 1233 aaKnown RBP3.64□□□□□ -1.83
PRP18YGR006W BNI5P53890 448 aaKnown RBP3.64□□□□□ -1.83
PRP18YGR006W ERB1Q04660 807 aaKnown RBP3.64□□□□□ -1.83
PRP18YGR006W YLR278CQ05854 1341 aa3.64□□□□□ -1.83
PRP18YGR006W LPD1P09624 499 aaKnown RBP3.63□□□□□ -1.83
PRP18YGR006W YAR066WP0CX18 203 aa3.63□□□□□ -1.83
PRP18YGR006W YHR214WP0CX19 203 aa3.63□□□□□ -1.83
PRP18YGR006W YCR022CP25620 114 aa3.63□□□□□ -1.83
PRP18YGR006W KRE2P27809 442 aa3.63□□□□□ -1.83
PRP18YGR006W NDI1P32340 513 aa3.63□□□□□ -1.83
PRP18YGR006W LOS1P33418 1100 aaPredicted RBP3.63□□□□□ -1.83
PRP18YGR006W PXA2P34230 853 aa3.63□□□□□ -1.83
PRP18YGR006W SRP72P38688 640 aaKnown RBP3.63□□□□□ -1.83
PRP18YGR006W CCT2P39076 527 aaKnown RBP3.63□□□□□ -1.83
PRP18YGR006W YDL186WP48568 277 aa3.63□□□□□ -1.83
PRP18YGR006W COS10P52924 374 aa3.63□□□□□ -1.83
PRP18YGR006W VAM3Q12241 283 aa3.63□□□□□ -1.83
PRP18YGR006W ERP4Q12450 207 aa3.63□□□□□ -1.83
PRP18YGR006W SMC6Q12749 1114 aa3.63□□□□□ -1.83
PRP18YGR006W YBR298C-AQ8TGK4 73 aa3.63□□□□□ -1.83
PRP18YGR006W ISN1Q99312 450 aa3.63□□□□□ -1.83
PRP18YGR006W HIS4P00815 799 aaKnown RBP3.62□□□□□ -1.83
PRP18YGR006W CLB1P24868 471 aa3.62□□□□□ -1.83
PRP18YGR006W PUT3P25502 979 aaPredicted RBP3.62□□□□□ -1.83
PRP18YGR006W YCR100CP25606 316 aa3.62□□□□□ -1.83
PRP18YGR006W URA7P28274 579 aaKnown RBP3.62□□□□□ -1.83
PRP18YGR006W VMA8P32610 256 aaKnown RBP3.62□□□□□ -1.83
PRP18YGR006W YHR054CP38780 354 aa3.62□□□□□ -1.83
PRP18YGR006W CAK1P43568 368 aaPredicted RBP3.62□□□□□ -1.83
PRP18YGR006W RPS0BP46654 252 aaKnown RBP3.62□□□□□ -1.83
PRP18YGR006W ECM27P47144 725 aa3.62□□□□□ -1.83
PRP18YGR006W YML6P51998 286 aa3.62□□□□□ -1.83
PRP18YGR006W MDG1P53885 366 aa3.62□□□□□ -1.83
PRP18YGR006W ODC1Q03028 310 aa3.62□□□□□ -1.83
PRP18YGR006W YDR387CQ04162 555 aa3.62□□□□□ -1.83
PRP18YGR006W MED2Q12124 431 aa3.62□□□□□ -1.83
PRP18YGR006W GDH1P07262 454 aaKnown RBP3.61□□□□□ -1.83
PRP18YGR006W MCK1P21965 375 aaKnown RBP3.61□□□□□ -1.83
PRP18YGR006W RPI1P23250 407 aaKnown RBP3.61□□□□□ -1.83
PRP18YGR006W ATS1P31386 333 aa3.61□□□□□ -1.83
PRP18YGR006W SIN4P32259 974 aa3.61□□□□□ -1.83
PRP18YGR006W APE2P32454 952 aaKnown RBP3.61□□□□□ -1.83
PRP18YGR006W ECM25P32525 599 aa3.61□□□□□ -1.83
PRP18YGR006W MMS4P38257 691 aa3.61□□□□□ -1.83
PRP18YGR006W YBP1P38315 674 aa3.61□□□□□ -1.83
PRP18YGR006W YJR011CP47086 261 aaPredicted RBP3.61□□□□□ -1.83
PRP18YGR006W PCP1P53259 346 aa3.61□□□□□ -1.83
PRP18YGR006W CAF40P53829 373 aa3.61□□□□□ -1.83
PRP18YGR006W KTR5P53966 522 aaPredicted RBP3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms