RNA–Protein interactions for RNA: YGL028C

SCW11, Transcript of Cell wall protein with similarity to glucanases, yeast

Gene SCW11, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCW11	YGL028C	RVS161	P25343	265 aa	Known RBP	1.45	□□□□□ -2.18
SCW11	YGL028C	PEP3	P27801	918 aa		1.45	□□□□□ -2.18
SCW11	YGL028C	ERG3	P32353	365 aa		1.45	□□□□□ -2.18
SCW11	YGL028C	UTH1	P36135	365 aa		1.45	□□□□□ -2.18
SCW11	YGL028C	UTP9	P38882	575 aa	Known RBP	1.45	□□□□□ -2.18
SCW11	YGL028C	ERP2	P39704	215 aa		1.45	□□□□□ -2.18
SCW11	YGL028C	AFG3	P39925	761 aa		1.45	□□□□□ -2.18
SCW11	YGL028C	TIF4631	P39935	952 aa	Known RBP	1.45	□□□□□ -2.18
SCW11	YGL028C	YMR147W	P40218	223 aa	Known RBP	1.45	□□□□□ -2.18
SCW11	YGL028C	VMA13	P41807	478 aa	Known RBP	1.45	□□□□□ -2.18
SCW11	YGL028C	ALK1	P43633	760 aa	Known RBP	1.45	□□□□□ -2.18
SCW11	YGL028C	GWT1	P47026	490 aa		1.45	□□□□□ -2.18
SCW11	YGL028C	PET130	P47065	347 aa		1.45	□□□□□ -2.18
SCW11	YGL028C	HEF3	P53978	1044 aa	Known RBP	1.45	□□□□□ -2.18
SCW11	YGL028C	MDM1	Q01846	1127 aa		1.45	□□□□□ -2.18
SCW11	YGL028C	RNY1	Q02933	434 aa	Known RBP	1.45	□□□□□ -2.18
SCW11	YGL028C	PIR3	Q03180	325 aa		1.45	□□□□□ -2.18
SCW11	YGL028C	TSR2	Q06672	205 aa	Known RBP	1.45	□□□□□ -2.18
SCW11	YGL028C	YDL057W	Q07379	328 aa		1.45	□□□□□ -2.18
SCW11	YGL028C	ESA1	Q08649	445 aa		1.45	□□□□□ -2.18
SCW11	YGL028C	YDL007C-A	Q2V2Q0	85 aa		1.45	□□□□□ -2.18
SCW11	YGL028C	FOB1	O13329	566 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	HIP1	P06775	603 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	CHS1	P08004	1131 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	CKA1	P15790	372 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	CPR4	P25334	318 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	NPL6	P32832	435 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	SHP1	P34223	423 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	CMC1	P36064	111 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	DUG2	P38149	878 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	VID24	P38263	362 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	SMF1	P38925	575 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	DOT5	P40553	215 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	ARF3	P40994	183 aa	RIP-Chip data	1.44	□□□□□ -2.18	not detected
SCW11	YGL028C	TWF1	P53250	332 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	SHY1	P53266	389 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	MRPL19	P53875	158 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	RQC1	Q05468	723 aa	Known RBP	1.44	□□□□□ -2.18
SCW11	YGL028C	KEL3	Q08979	651 aa	Predicted RBP	1.44	□□□□□ -2.18
SCW11	YGL028C	SEC39	Q12745	709 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	MET17	P06106	444 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	COR1	P07256	457 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	RPL31B	P0C2H9	113 aa	Known RBP	1.44	□□□□□ -2.18
SCW11	YGL028C	SNT1	P25357	1226 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	CDC60	P26637	1090 aa	Known RBP	1.44	□□□□□ -2.18
SCW11	YGL028C	UTR4	P32626	227 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	BNA4	P38169	460 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	KEL1	P38853	1164 aa	Known RBP	1.44	□□□□□ -2.18
SCW11	YGL028C	MBB1	P39534	108 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	REE1	P40893	198 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	SRB7	P47822	140 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	CAF40	P53829	373 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	RPT6	Q01939	405 aa	Known RBP	1.44	□□□□□ -2.18
SCW11	YGL028C	PDS5	Q04264	1277 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	YMR027W	Q04371	470 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	RBS1	Q05672	457 aa	Known RBP	1.44	□□□□□ -2.18
SCW11	YGL028C	PHO92	Q06390	306 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	TSR1	Q07381	788 aa	Known RBP	1.44	□□□□□ -2.18
SCW11	YGL028C	THP1	Q08231	455 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	ATG29	Q12092	213 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	SCM3	Q12334	223 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	RRD2	Q12461	358 aa		1.44	□□□□□ -2.18
SCW11	YGL028C	PAP1	P29468	568 aa	Known RBP	1.43	□□□□□ -2.18
SCW11	YGL028C	GPI10	P30777	616 aa		1.43	□□□□□ -2.18
SCW11	YGL028C	NFU1	P32860	256 aa		1.43	□□□□□ -2.18
SCW11	YGL028C	SDH3	P33421	198 aa		1.43	□□□□□ -2.18
SCW11	YGL028C	PMT1	P33775	817 aa		1.43	□□□□□ -2.18
SCW11	YGL028C	PIM1	P36775	1133 aa		1.43	□□□□□ -2.18
SCW11	YGL028C	SYG1	P40528	902 aa		1.43	□□□□□ -2.18
SCW11	YGL028C	ZPR1	P53303	486 aa	Known RBP	1.43	□□□□□ -2.18
SCW11	YGL028C	HAL1	Q01766	294 aa		1.43	□□□□□ -2.18
SCW11	YGL028C	RIM20	Q12033	661 aa		1.43	□□□□□ -2.18
SCW11	YGL028C	THP3	Q12049	470 aa	Known RBP	1.43	□□□□□ -2.18
SCW11	YGL028C	CFT2	Q12102	859 aa	Predicted RBP	1.43	□□□□□ -2.18
SCW11	YGL028C	RTN2	Q12443	393 aa		1.43	□□□□□ -2.18
SCW11	YGL028C	YOL159C-A	Q3E769	90 aa		1.43	□□□□□ -2.18
SCW11	YGL028C	RAV1	P47104	1357 aa		1.43	□□□□□ -2.18
SCW11	YGL028C	MES1	P00958	751 aa	Known RBP	1.42	□□□□□ -2.18
SCW11	YGL028C	INH1	P01097	85 aa		1.42	□□□□□ -2.18
SCW11	YGL028C	RED1	P14291	827 aa		1.42	□□□□□ -2.18
SCW11	YGL028C	GLK1	P17709	500 aa	Known RBP	1.42	□□□□□ -2.18
SCW11	YGL028C	PCL1	P24867	279 aa		1.42	□□□□□ -2.18
SCW11	YGL028C	ATP11	P32453	318 aa		1.42	□□□□□ -2.18
SCW11	YGL028C	MFT1	P33441	392 aa	Known RBP	1.42	□□□□□ -2.18
SCW11	YGL028C	NAT2	P37293	288 aa		1.42	□□□□□ -2.18
SCW11	YGL028C	LSM5	P40089	93 aa	Known RBP	1.42	□□□□□ -2.18
SCW11	YGL028C	FAU1	P40099	211 aa		1.42	□□□□□ -2.18
SCW11	YGL028C	HXT14	P42833	540 aa		1.42	□□□□□ -2.18
SCW11	YGL028C	YGL108C	P53139	140 aa		1.42	□□□□□ -2.18
SCW11	YGL028C	CAF130	P53280	1122 aa	Predicted RBP	1.42	□□□□□ -2.18
SCW11	YGL028C	GPI1	P53306	609 aa		1.42	□□□□□ -2.18
SCW11	YGL028C	YGR250C	P53316	781 aa	Known RBP	1.42	□□□□□ -2.18
SCW11	YGL028C	TOF1	P53840	1238 aa		1.42	□□□□□ -2.18
SCW11	YGL028C	KTR5	P53966	522 aa	Predicted RBP	1.42	□□□□□ -2.18
SCW11	YGL028C	RPA49	Q01080	415 aa	Predicted RBP	1.42	□□□□□ -2.18
SCW11	YGL028C	YDR239C	Q03780	787 aa		1.42	□□□□□ -2.18
SCW11	YGL028C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	1.42	□□□□□ -2.18	not detected
SCW11	YGL028C	BRR1	Q99177	341 aa	Predicted RBP	1.42	□□□□□ -2.18
SCW11	YGL028C	ISN1	Q99312	450 aa		1.42	□□□□□ -2.18
SCW11	YGL028C	PET123	P17558	318 aa		1.41	□□□□□ -2.18

Retrieved 100 of 5,963 RNA–protein pairs in 44.7 ms