RNA–Protein interactions for RNA: YDR469W

SDC1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SDC1, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC1YDR469W AEP3Q12089 606 aa2.33□□□□□ -2.04
SDC1YDR469W TFB5Q3E7C1 72 aaPredicted RBP2.33□□□□□ -2.04
SDC1YDR469W ARO3P14843 370 aaKnown RBP2.32□□□□□ -2.04
SDC1YDR469W TAL1P15019 335 aaKnown RBP2.32□□□□□ -2.04
SDC1YDR469W SPO7P18410 259 aa2.32□□□□□ -2.04
SDC1YDR469W ART10P18634 518 aaKnown RBP2.32□□□□□ -2.04
SDC1YDR469W KGD2P19262 463 aaPredicted RBP2.32□□□□□ -2.04
SDC1YDR469W CLN1P20437 546 aa2.32□□□□□ -2.04
SDC1YDR469W BUD5P25300 642 aaPredicted RBP2.32□□□□□ -2.04
SDC1YDR469W ADH7P25377 361 aa2.32□□□□□ -2.04
SDC1YDR469W LAC1P28496 418 aa2.32□□□□□ -2.04
SDC1YDR469W YIM1P28625 365 aa2.32□□□□□ -2.04
SDC1YDR469W CRM1P30822 1084 aaKnown RBP2.32□□□□□ -2.04
SDC1YDR469W SOF1P33750 489 aaKnown RBP2.32□□□□□ -2.04
SDC1YDR469W LHS1P36016 881 aa2.32□□□□□ -2.04
SDC1YDR469W RPF2P36160 344 aaKnown RBP2.32□□□□□ -2.04
SDC1YDR469W MRPL40P36534 297 aa2.32□□□□□ -2.04
SDC1YDR469W ICS2P38284 255 aa2.32□□□□□ -2.04
SDC1YDR469W TIF5P38431 405 aaKnown RBP2.32□□□□□ -2.04
SDC1YDR469W YNG2P38806 282 aaKnown RBP2.32□□□□□ -2.04
SDC1YDR469W YDR089WP38966 869 aa2.32□□□□□ -2.04
SDC1YDR469W AGX1P43567 385 aa2.32□□□□□ -2.04
SDC1YDR469W YFR020WP43600 232 aa2.32□□□□□ -2.04
SDC1YDR469W DCP2P53550 970 aaKnown RBP2.32□□□□□ -2.04
SDC1YDR469W YNL143CP53908 130 aa2.32□□□□□ -2.04
SDC1YDR469W ARP5P53946 755 aa2.32□□□□□ -2.04
SDC1YDR469W RRN5Q02983 363 aa2.32□□□□□ -2.04
SDC1YDR469W RBA50Q04418 439 aa2.32□□□□□ -2.04
SDC1YDR469W YOL159CQ08300 171 aa2.32□□□□□ -2.04
SDC1YDR469W LEA1Q08963 238 aaPredicted RBP2.32□□□□□ -2.04
SDC1YDR469W YDL007C-AQ2V2Q0 85 aa2.32□□□□□ -2.04
SDC1YDR469W STE3P06783 470 aa2.31□□□□□ -2.04
SDC1YDR469W DBP3P20447 523 aaKnown RBP2.31□□□□□ -2.04
SDC1YDR469W PRD1P25375 712 aa2.31□□□□□ -2.04
SDC1YDR469W IDH2P28241 369 aaKnown RBP2.31□□□□□ -2.04
SDC1YDR469W RAD24P32641 659 aa2.31□□□□□ -2.04
SDC1YDR469W SEC66P33754 206 aa2.31□□□□□ -2.04
SDC1YDR469W YUH1P35127 236 aa2.31□□□□□ -2.04
SDC1YDR469W RRP1P35178 278 aaPredicted RBP2.31□□□□□ -2.04
SDC1YDR469W ADE17P38009 592 aaKnown RBP2.31□□□□□ -2.04
SDC1YDR469W MMS4P38257 691 aa2.31□□□□□ -2.04
SDC1YDR469W DIA4P38705 446 aaPredicted RBP2.31□□□□□ -2.04
SDC1YDR469W MSR1P38714 643 aa2.31□□□□□ -2.04
SDC1YDR469W ECM10P39987 644 aa2.31□□□□□ -2.04
SDC1YDR469W DPB11P47027 764 aaPredicted RBP2.31□□□□□ -2.04
SDC1YDR469W MSY1P48527 492 aa2.31□□□□□ -2.04
SDC1YDR469W APT1P49435 187 aaKnown RBP2.31□□□□□ -2.04
SDC1YDR469W YIP5P53108 310 aa2.31□□□□□ -2.04
SDC1YDR469W YGR127WP53275 312 aa2.31□□□□□ -2.04
SDC1YDR469W APJ1P53940 528 aa2.31□□□□□ -2.04
SDC1YDR469W OCA2P53949 197 aa2.31□□□□□ -2.04
SDC1YDR469W EFM6P53970 246 aa2.31□□□□□ -2.04
SDC1YDR469W SKO1Q02100 647 aa2.31□□□□□ -2.04
SDC1YDR469W RPN9Q04062 393 aaKnown RBP2.31□□□□□ -2.04
SDC1YDR469W MGR3Q04472 501 aa2.31□□□□□ -2.04
SDC1YDR469W COQ9Q05779 260 aa2.31□□□□□ -2.04
SDC1YDR469W DCS1Q06151 350 aa2.31□□□□□ -2.04
SDC1YDR469W PIG1Q06216 648 aa2.31□□□□□ -2.04
SDC1YDR469W MCP2Q06567 569 aa2.31□□□□□ -2.04
SDC1YDR469W TEN1Q07921 160 aa2.31□□□□□ -2.04
SDC1YDR469W DIS3Q08162 1001 aaKnown RBP2.31□□□□□ -2.04
SDC1YDR469W MCH4Q08268 501 aa2.31□□□□□ -2.04
SDC1YDR469W BAG7Q12128 409 aa2.31□□□□□ -2.04
SDC1YDR469W INP53Q12271 1107 aa2.31□□□□□ -2.04
SDC1YDR469W MRPL23Q12487 163 aaPredicted RBP2.31□□□□□ -2.04
SDC1YDR469W RAD61Q99359 647 aa2.31□□□□□ -2.04
SDC1YDR469W CBP1P07252 654 aa2.3□□□□□ -2.04
SDC1YDR469W SCH9P11792 824 aaKnown RBP2.3□□□□□ -2.04
SDC1YDR469W BAR1P12630 587 aa2.3□□□□□ -2.04
SDC1YDR469W SRP54P20424 541 aaKnown RBP2.3□□□□□ -2.04
SDC1YDR469W SPE2P21182 396 aa2.3□□□□□ -2.04
SDC1YDR469W SNT1P25357 1226 aa2.3□□□□□ -2.04
SDC1YDR469W PUP3P25451 205 aaKnown RBP2.3□□□□□ -2.04
SDC1YDR469W LDB16P25587 256 aa2.3□□□□□ -2.04
SDC1YDR469W GAC1P28006 793 aa2.3□□□□□ -2.04
SDC1YDR469W AFG1P32317 509 aa2.3□□□□□ -2.04
SDC1YDR469W HES1P35843 434 aa2.3□□□□□ -2.04
SDC1YDR469W AAP1P37898 856 aaKnown RBP2.3□□□□□ -2.04
SDC1YDR469W ARA1P38115 344 aa2.3□□□□□ -2.04
SDC1YDR469W ZTA1P38230 334 aaKnown RBP2.3□□□□□ -2.04
SDC1YDR469W GDT1P38301 280 aaPredicted RBP2.3□□□□□ -2.04
SDC1YDR469W ELO1P39540 310 aa2.3□□□□□ -2.04
SDC1YDR469W ELP2P42935 788 aa2.3□□□□□ -2.04
SDC1YDR469W YFR018CP43599 363 aa2.3□□□□□ -2.04
SDC1YDR469W FAR3P46671 204 aa2.3□□□□□ -2.04
SDC1YDR469W ATG27P46989 271 aa2.3□□□□□ -2.04
SDC1YDR469W COS5P47187 383 aa2.3□□□□□ -2.04
SDC1YDR469W UBP8P50102 471 aa2.3□□□□□ -2.04
SDC1YDR469W FMS1P50264 508 aa2.3□□□□□ -2.04
SDC1YDR469W RMD9P53140 646 aaKnown RBP2.3□□□□□ -2.04
SDC1YDR469W RPT4P53549 437 aaKnown RBP2.3□□□□□ -2.04
SDC1YDR469W PRM1P53835 661 aa2.3□□□□□ -2.04
SDC1YDR469W SMA1Q02651 245 aa2.3□□□□□ -2.04
SDC1YDR469W FIN1Q03898 291 aa2.3□□□□□ -2.04
SDC1YDR469W YLH47Q06493 454 aa2.3□□□□□ -2.04
SDC1YDR469W ECM30Q06673 1274 aa2.3□□□□□ -2.04
SDC1YDR469W YLR413WQ06689 675 aa2.3□□□□□ -2.04
SDC1YDR469W COS7Q07788 383 aa2.3□□□□□ -2.04
SDC1YDR469W APC5Q08683 685 aa2.3□□□□□ -2.04
SDC1YDR469W DAP1Q12091 152 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms