RNA–Protein interactions for RNA: YDR182W

CDC1, Transcript of Putative lipid phosphatase of the endoplasmic reticulum, yeast

Gene CDC1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC1	YDR182W	ARG4	P04076	463 aa	Predicted RBP	6.11	□□□□□ -1.43
CDC1	YDR182W	LEU4	P06208	619 aa	Known RBP	6.11	□□□□□ -1.43
CDC1	YDR182W	NAM9	P27929	486 aa		6.11	□□□□□ -1.43
CDC1	YDR182W	CDC12	P32468	407 aa	Known RBP	6.11	□□□□□ -1.43
CDC1	YDR182W	ERG1	P32476	496 aa	Known RBP	6.11	□□□□□ -1.43
CDC1	YDR182W	CDC5	P32562	705 aa		6.11	□□□□□ -1.43
CDC1	YDR182W	RMA1	P36001	430 aa	Known RBP	6.11	□□□□□ -1.43
CDC1	YDR182W	REV7	P38927	245 aa		6.11	□□□□□ -1.43
CDC1	YDR182W	COA1	P40452	197 aa		6.11	□□□□□ -1.43
CDC1	YDR182W	NEO1	P40527	1151 aa		6.11	□□□□□ -1.43
CDC1	YDR182W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	6.11	□□□□□ -1.43	not detected
CDC1	YDR182W	YGL176C	P46945	554 aa		6.11	□□□□□ -1.43
CDC1	YDR182W	YJR039W	P47107	1121 aa		6.11	□□□□□ -1.43
CDC1	YDR182W	HOC1	P47124	396 aa		6.11	□□□□□ -1.43
CDC1	YDR182W	YPT32	P51996	222 aa	Known RBP	6.11	□□□□□ -1.43
CDC1	YDR182W	ROG1	P53118	685 aa		6.11	□□□□□ -1.43
CDC1	YDR182W	YGR250C	P53316	781 aa	Known RBP	6.11	□□□□□ -1.43
CDC1	YDR182W	CDA1	Q06702	301 aa		6.11	□□□□□ -1.43
CDC1	YDR182W	CDA2	Q06703	312 aa		6.11	□□□□□ -1.43
CDC1	YDR182W	XYL2	Q07993	356 aa		6.11	□□□□□ -1.43
CDC1	YDR182W	SLH1	P53327	1967 aa	Known RBP	6.1	□□□□□ -1.43
CDC1	YDR182W	YPT1	P01123	206 aa	Known RBP	6.1	□□□□□ -1.43
CDC1	YDR182W	HOM3	P10869	527 aa		6.1	□□□□□ -1.43
CDC1	YDR182W	CDC26	P14724	124 aa		6.1	□□□□□ -1.43
CDC1	YDR182W	TAH1	P25638	111 aa	Predicted RBP	6.1	□□□□□ -1.43
CDC1	YDR182W	FAA1	P30624	700 aa	Known RBP	6.1	□□□□□ -1.43
CDC1	YDR182W	ZIP1	P31111	875 aa		6.1	□□□□□ -1.43
CDC1	YDR182W	FUN30	P31380	1131 aa		6.1	□□□□□ -1.43
CDC1	YDR182W	SUI1	P32911	108 aa	Known RBP	6.1	□□□□□ -1.43
CDC1	YDR182W	KAE1	P36132	386 aa		6.1	□□□□□ -1.43
CDC1	YDR182W	YHR112C	P38716	378 aa		6.1	□□□□□ -1.43
CDC1	YDR182W	UTP9	P38882	575 aa	Known RBP	6.1	□□□□□ -1.43
CDC1	YDR182W	FMP52	P40008	231 aa		6.1	□□□□□ -1.43
CDC1	YDR182W	PHB1	P40961	287 aa		6.1	□□□□□ -1.43
CDC1	YDR182W	UBX6	P47049	396 aa		6.1	□□□□□ -1.43
CDC1	YDR182W	PRP31	P49704	494 aa	Predicted RBP	6.1	□□□□□ -1.43
CDC1	YDR182W	PRP38	Q00723	242 aa	Predicted RBP	6.1	□□□□□ -1.43
CDC1	YDR182W	GIP3	Q03016	1276 aa		6.1	□□□□□ -1.43
CDC1	YDR182W	USA1	Q03714	838 aa		6.1	□□□□□ -1.43
CDC1	YDR182W	RUP1	Q12242	671 aa		6.1	□□□□□ -1.43
CDC1	YDR182W	SPT3	P06844	337 aa		6.09	□□□□□ -1.43
CDC1	YDR182W	CYT1	P07143	309 aa		6.09	□□□□□ -1.43
CDC1	YDR182W	SEC62	P21825	274 aa		6.09	□□□□□ -1.43
CDC1	YDR182W	SGV1	P23293	657 aa	Known RBP	6.09	□□□□□ -1.43
CDC1	YDR182W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	6.09	□□□□□ -1.43	not detected
CDC1	YDR182W	MKK2	P32491	506 aa		6.09	□□□□□ -1.43
CDC1	YDR182W	RRN3	P36070	627 aa		6.09	□□□□□ -1.43
CDC1	YDR182W	YKR078W	P36158	585 aa	Known RBP	6.09	□□□□□ -1.43
CDC1	YDR182W	BAP3	P41815	604 aa		6.09	□□□□□ -1.43
CDC1	YDR182W	YJR154W	P47181	346 aa		6.09	□□□□□ -1.43
CDC1	YDR182W	ROM1	P53046	1155 aa		6.09	□□□□□ -1.43
CDC1	YDR182W	ERG13	P54839	491 aa	Known RBP	6.09	□□□□□ -1.43
CDC1	YDR182W	BSC2	Q05611	235 aa		6.09	□□□□□ -1.43
CDC1	YDR182W	MHT1	Q12525	324 aa		6.09	□□□□□ -1.43
CDC1	YDR182W	AI3	P03877	415 aa		6.09	□□□□□ -1.44
CDC1	YDR182W	COR1	P07256	457 aa		6.09	□□□□□ -1.44
CDC1	YDR182W	ASC1	P38011	319 aa	Known RBP	6.09	□□□□□ -1.44
CDC1	YDR182W	BMT2	P38278	337 aa		6.09	□□□□□ -1.44
CDC1	YDR182W	MAD2	P40958	196 aa		6.09	□□□□□ -1.44
CDC1	YDR182W	YJR098C	P47139	656 aa		6.09	□□□□□ -1.44
CDC1	YDR182W	BIO3	P50277	480 aa		6.09	□□□□□ -1.44
CDC1	YDR182W	IST1	P53843	298 aa	Predicted RBP	6.09	□□□□□ -1.44
CDC1	YDR182W	LSM3	P57743	89 aa	Known RBP	6.09	□□□□□ -1.44
CDC1	YDR182W	NUP53	Q03790	475 aa		6.09	□□□□□ -1.44
CDC1	YDR182W	GAD1	Q04792	585 aa		6.09	□□□□□ -1.44
CDC1	YDR182W	RAX1	Q08760	435 aa		6.09	□□□□□ -1.44
CDC1	YDR182W	AKR2	Q12013	749 aa		6.09	□□□□□ -1.44
CDC1	YDR182W	TPO4	Q12256	659 aa		6.09	□□□□□ -1.44
CDC1	YDR182W	AHA1	Q12449	350 aa	Known RBP	6.09	□□□□□ -1.44
CDC1	YDR182W	YPR064W	Q12492	139 aa		6.09	□□□□□ -1.44
CDC1	YDR182W	RPL7A	P05737	244 aa	Known RBP	6.08	□□□□□ -1.44
CDC1	YDR182W	PRI2	P20457	528 aa		6.08	□□□□□ -1.44
CDC1	YDR182W	PET127	P32606	800 aa		6.08	□□□□□ -1.44
CDC1	YDR182W	OMA1	P36163	345 aa		6.08	□□□□□ -1.44
CDC1	YDR182W	YDR089W	P38966	869 aa		6.08	□□□□□ -1.44
CDC1	YDR182W	FKH2	P41813	862 aa		6.08	□□□□□ -1.44
CDC1	YDR182W	STE24	P47154	453 aa		6.08	□□□□□ -1.44
CDC1	YDR182W	SDT1	P53078	280 aa		6.08	□□□□□ -1.44
CDC1	YDR182W	YGR012W	P53206	393 aa		6.08	□□□□□ -1.44
CDC1	YDR182W	NNF2	P53253	936 aa		6.08	□□□□□ -1.44
CDC1	YDR182W	LSC1	P53598	329 aa	Known RBP	6.08	□□□□□ -1.44
CDC1	YDR182W	UBX4	P54730	416 aa		6.08	□□□□□ -1.44
CDC1	YDR182W	SDH1	Q00711	640 aa		6.08	□□□□□ -1.44
CDC1	YDR182W	APC4	Q04601	652 aa		6.08	□□□□□ -1.44
CDC1	YDR182W	YLR346C	Q06139	101 aa		6.08	□□□□□ -1.44
CDC1	YDR182W	PDR8	Q06149	701 aa		6.08	□□□□□ -1.44
CDC1	YDR182W	ENT4	Q07872	247 aa		6.08	□□□□□ -1.44
CDC1	YDR182W	REX4	Q08237	289 aa		6.08	□□□□□ -1.44
CDC1	YDR182W	GPB1	Q08886	897 aa		6.08	□□□□□ -1.44
CDC1	YDR182W	RPL7B	Q12213	244 aa	Known RBP	6.08	□□□□□ -1.44
CDC1	YDR182W	DST1	P07273	309 aa		6.07	□□□□□ -1.44
CDC1	YDR182W	NMT1	P14743	455 aa		6.07	□□□□□ -1.44
CDC1	YDR182W	VPS33	P20795	691 aa		6.07	□□□□□ -1.44
CDC1	YDR182W	ADH7	P25377	361 aa		6.07	□□□□□ -1.44
CDC1	YDR182W	SPS22	P25380	463 aa		6.07	□□□□□ -1.44
CDC1	YDR182W	ILV6	P25605	309 aa	Known RBP	6.07	□□□□□ -1.44
CDC1	YDR182W	IDH2	P28241	369 aa	Known RBP	6.07	□□□□□ -1.44
CDC1	YDR182W	YMC1	P32331	307 aa		6.07	□□□□□ -1.44
CDC1	YDR182W	YSC84	P32793	468 aa		6.07	□□□□□ -1.44
CDC1	YDR182W	ORC2	P32833	620 aa		6.07	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 45.6 ms