RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTP1	YDL230W	PRT1	P06103	763 aa	Known RBP	11.91	□□□□□ -0.5
PTP1	YDL230W	CBS2	P14905	389 aa		11.91	□□□□□ -0.5
PTP1	YDL230W	CLB3	P24870	427 aa		11.91	□□□□□ -0.5
PTP1	YDL230W	LHS1	P36016	881 aa		11.91	□□□□□ -0.5
PTP1	YDL230W	GLG1	P36143	616 aa		11.91	□□□□□ -0.5
PTP1	YDL230W	RIB1	P38066	345 aa		11.91	□□□□□ -0.5
PTP1	YDL230W	RCK1	P38622	512 aa		11.91	□□□□□ -0.5
PTP1	YDL230W	YHR127W	P38833	243 aa	Known RBP	11.91	□□□□□ -0.5
PTP1	YDL230W	YNL140C	P53910	189 aa		11.91	□□□□□ -0.5
PTP1	YDL230W	ARR1	Q06596	294 aa		11.91	□□□□□ -0.5
PTP1	YDL230W	PUS7	Q08647	676 aa	Known RBP	11.91	□□□□□ -0.5
PTP1	YDL230W	TAO3	P40468	2376 aa		11.9	□□□□□ -0.5
PTP1	YDL230W	MRPL32	P25348	183 aa		11.9	□□□□□ -0.5
PTP1	YDL230W	CBP4	P37267	147 aa		11.9	□□□□□ -0.5
PTP1	YDL230W	SSZ1	P38788	538 aa	Known RBP	11.9	□□□□□ -0.5
PTP1	YDL230W	YEL020C	P39994	560 aa		11.9	□□□□□ -0.5
PTP1	YDL230W	MSS2	P40990	351 aa		11.9	□□□□□ -0.5
PTP1	YDL230W	AZF1	P41696	914 aa		11.9	□□□□□ -0.5
PTP1	YDL230W	GCV1	P48015	400 aa		11.9	□□□□□ -0.5
PTP1	YDL230W	ATP22	P50273	684 aa	Predicted RBP	11.9	□□□□□ -0.5
PTP1	YDL230W	GIP3	Q03016	1276 aa		11.9	□□□□□ -0.5
PTP1	YDL230W	THP1	Q08231	455 aa		11.9	□□□□□ -0.5
PTP1	YDL230W	SGO1	Q08490	590 aa		11.9	□□□□□ -0.5
PTP1	YDL230W	AI3	P03877	415 aa		11.89	□□□□□ -0.51
PTP1	YDL230W	KSS1	P14681	368 aa		11.89	□□□□□ -0.51
PTP1	YDL230W	TRX3	P25372	127 aa		11.89	□□□□□ -0.51
PTP1	YDL230W	RSP5	P39940	809 aa	Known RBP	11.89	□□□□□ -0.51
PTP1	YDL230W	PMT4	P46971	762 aa		11.89	□□□□□ -0.51
PTP1	YDL230W	MUP1	P50276	574 aa		11.89	□□□□□ -0.51
PTP1	YDL230W	SED5	Q01590	340 aa		11.89	□□□□□ -0.51
PTP1	YDL230W	RSN1	Q03516	953 aa		11.89	□□□□□ -0.51
PTP1	YDL230W	YHM2	Q04013	314 aa		11.89	□□□□□ -0.51
PTP1	YDL230W	MDM12	Q92328	271 aa		11.89	□□□□□ -0.51
PTP1	YDL230W	YSR3	P23501	404 aa		11.88	□□□□□ -0.51
PTP1	YDL230W	RPS5	P26783	225 aa	Known RBP	11.88	□□□□□ -0.51
PTP1	YDL230W	YBR071W	P38243	211 aa		11.88	□□□□□ -0.51
PTP1	YDL230W	NBP35	P52920	328 aa		11.88	□□□□□ -0.51
PTP1	YDL230W	YMR034C	Q05131	434 aa	Predicted RBP	11.88	□□□□□ -0.51
PTP1	YDL230W	SSQ1	Q05931	657 aa	Predicted RBP	11.88	□□□□□ -0.51
PTP1	YDL230W	ATG10	Q07879	167 aa		11.88	□□□□□ -0.51
PTP1	YDL230W	GAL3	P13045	520 aa		11.87	□□□□□ -0.51
PTP1	YDL230W	SIS1	P25294	352 aa	Known RBP	11.87	□□□□□ -0.51
PTP1	YDL230W	PHO84	P25297	587 aa	Known RBP	11.87	□□□□□ -0.51
PTP1	YDL230W	PPZ1	P26570	692 aa		11.87	□□□□□ -0.51
PTP1	YDL230W	IDH2	P28241	369 aa	Known RBP	11.87	□□□□□ -0.51
PTP1	YDL230W	SLX5	P32828	619 aa	Known RBP	11.87	□□□□□ -0.51
PTP1	YDL230W	DEF1	P35732	738 aa	Known RBP	11.87	□□□□□ -0.51
PTP1	YDL230W	ECM8	P38246	354 aa		11.87	□□□□□ -0.51
PTP1	YDL230W	GOS1	P38736	223 aa		11.87	□□□□□ -0.51
PTP1	YDL230W	MNN9	P39107	395 aa	Known RBP	11.87	□□□□□ -0.51
PTP1	YDL230W	YFR020W	P43600	232 aa		11.87	□□□□□ -0.51
PTP1	YDL230W	BIO3	P50277	480 aa		11.87	□□□□□ -0.51
PTP1	YDL230W	NPY1	P53164	384 aa		11.87	□□□□□ -0.51
PTP1	YDL230W	GRS2	Q06817	618 aa		11.87	□□□□□ -0.51
PTP1	YDL230W	TRM8	Q12009	286 aa		11.87	□□□□□ -0.51
PTP1	YDL230W	YDL199C	Q12407	687 aa		11.87	□□□□□ -0.51
PTP1	YDL230W	GRR1	P24814	1151 aa		11.86	□□□□□ -0.51
PTP1	YDL230W	MAE1	P36013	669 aa	Known RBP	11.86	□□□□□ -0.51
PTP1	YDL230W	ARA1	P38115	344 aa		11.86	□□□□□ -0.51
PTP1	YDL230W	TAE1	P38340	232 aa		11.86	□□□□□ -0.51
PTP1	YDL230W	EGD2	P38879	174 aa	Known RBP	11.86	□□□□□ -0.51
PTP1	YDL230W	YAR028W	P39548	234 aa		11.86	□□□□□ -0.51
PTP1	YDL230W	MET12	P46151	657 aa		11.86	□□□□□ -0.51
PTP1	YDL230W	MTO1	P53070	669 aa		11.86	□□□□□ -0.51
PTP1	YDL230W	APC4	Q04601	652 aa		11.86	□□□□□ -0.51
PTP1	YDL230W	VPS74	Q06385	345 aa		11.86	□□□□□ -0.51
PTP1	YDL230W	FLC1	Q08967	793 aa		11.86	□□□□□ -0.51
PTP1	YDL230W	HTA1	P04911	132 aa	Known RBP	11.85	□□□□□ -0.51
PTP1	YDL230W	TPK3	P05986	398 aa		11.85	□□□□□ -0.51
PTP1	YDL230W	HBS1	P32769	611 aa	Known RBP	11.85	□□□□□ -0.51
PTP1	YDL230W	CAT2	P32796	670 aa	Known RBP	11.85	□□□□□ -0.51
PTP1	YDL230W	SPO23	P33757	523 aa		11.85	□□□□□ -0.51
PTP1	YDL230W	VPS21	P36017	210 aa	Known RBP	11.85	□□□□□ -0.51
PTP1	YDL230W	TSL1	P38427	1098 aa	Known RBP	11.85	□□□□□ -0.51
PTP1	YDL230W	YPT35	P38815	214 aa	Known RBP	11.85	□□□□□ -0.51
PTP1	YDL230W	RTS3	P53289	263 aa		11.85	□□□□□ -0.51
PTP1	YDL230W	ZRG17	P53735	605 aa		11.85	□□□□□ -0.51
PTP1	YDL230W	SWP1	Q02795	286 aa		11.85	□□□□□ -0.51
PTP1	YDL230W	COS7	Q07788	383 aa		11.85	□□□□□ -0.51
PTP1	YDL230W	GYP1	Q08484	637 aa		11.85	□□□□□ -0.51
PTP1	YDL230W	NMD4	Q12129	218 aa		11.85	□□□□□ -0.51
PTP1	YDL230W	YLL054C	Q12244	843 aa		11.85	□□□□□ -0.51
PTP1	YDL230W	GPH1	P06738	902 aa	Known RBP	11.84	□□□□□ -0.51
PTP1	YDL230W	RPS21A	P0C0V8	87 aa	Known RBP	11.84	□□□□□ -0.51
PTP1	YDL230W	SYP1	P25623	870 aa	Known RBP	11.84	□□□□□ -0.51
PTP1	YDL230W	MRPL6	P32904	214 aa		11.84	□□□□□ -0.51
PTP1	YDL230W	GIC1	P38785	314 aa		11.84	□□□□□ -0.51
PTP1	YDL230W	GIM4	P40005	111 aa	Known RBP	11.84	□□□□□ -0.51
PTP1	YDL230W	NDE1	P40215	560 aa		11.84	□□□□□ -0.51
PTP1	YDL230W	MPM1	P40364	252 aa		11.84	□□□□□ -0.51
PTP1	YDL230W	YFL066C	P43538	392 aa		11.84	□□□□□ -0.51
PTP1	YDL230W	FAR7	P43592	221 aa		11.84	□□□□□ -0.51
PTP1	YDL230W	SHE4	P51534	789 aa		11.84	□□□□□ -0.51
PTP1	YDL230W	KXD1	P53158	218 aa		11.84	□□□□□ -0.51
PTP1	YDL230W	BNI4	P53858	892 aa		11.84	□□□□□ -0.51
PTP1	YDL230W	AQR1	P53943	586 aa		11.84	□□□□□ -0.51
PTP1	YDL230W	TLG1	Q03322	224 aa		11.84	□□□□□ -0.51
PTP1	YDL230W	ENT2	Q05785	613 aa		11.84	□□□□□ -0.51
PTP1	YDL230W	DBP9	Q06218	594 aa	Known RBP	11.84	□□□□□ -0.51
PTP1	YDL230W	MCM21	Q06675	368 aa		11.84	□□□□□ -0.51

Retrieved 100 of 5,963 RNA–protein pairs in 16 ms