RNA–Protein interactions for RNA: YDL223C

HBT1, Transcript of Shmoo tip protein, substrate of Hub1p ubiquitin-like protein, yeast

Gene HBT1, Length 3,141 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HBT1	YDL223C	PEP4	P07267	405 aa	Known RBP	3.11	□□□□□ -1.91
HBT1	YDL223C	RPL31B	P0C2H9	113 aa	Known RBP	3.11	□□□□□ -1.91
HBT1	YDL223C	NUP1	P20676	1076 aa		3.11	□□□□□ -1.91
HBT1	YDL223C	OTU2	P38747	307 aa	Known RBP	3.11	□□□□□ -1.91
HBT1	YDL223C	NDT80	P38830	627 aa		3.11	□□□□□ -1.91
HBT1	YDL223C	HXT9	P40885	567 aa		3.11	□□□□□ -1.91
HBT1	YDL223C	RHO5	P53879	331 aa	Known RBP	3.11	□□□□□ -1.91
HBT1	YDL223C	ACL4	Q03771	387 aa		3.11	□□□□□ -1.91
HBT1	YDL223C	NKP2	Q06162	153 aa		3.11	□□□□□ -1.91
HBT1	YDL223C	YLR456W	Q06199	204 aa		3.11	□□□□□ -1.91
HBT1	YDL223C	SUE1	Q06524	206 aa		3.11	□□□□□ -1.91
HBT1	YDL223C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
HBT1	YDL223C	SKS1	Q12505	502 aa		3.11	□□□□□ -1.91
HBT1	YDL223C	YMR084W	A2P2R3	262 aa		3.11	□□□□□ -1.91
HBT1	YDL223C	GLK1	P17709	500 aa	Known RBP	3.11	□□□□□ -1.91
HBT1	YDL223C	SPB1	P25582	841 aa	Predicted RBP	3.11	□□□□□ -1.91
HBT1	YDL223C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
HBT1	YDL223C	RPL32	P38061	130 aa	Known RBP	3.11	□□□□□ -1.91
HBT1	YDL223C	PKP2	P53170	491 aa		3.11	□□□□□ -1.91
HBT1	YDL223C	MYO5	Q04439	1219 aa	Known RBP	3.11	□□□□□ -1.91
HBT1	YDL223C	FRE3	Q08905	711 aa		3.11	□□□□□ -1.91
HBT1	YDL223C	YIL060W	P40519	144 aa		3.1	□□□□□ -1.91
HBT1	YDL223C	BUD32	P53323	261 aa		3.1	□□□□□ -1.91
HBT1	YDL223C	RIF1	P29539	1916 aa		3.1	□□□□□ -1.91
HBT1	YDL223C	TRX1	P22217	103 aa	Known RBP	3.1	□□□□□ -1.91
HBT1	YDL223C	YCR006C	P25350	157 aa		3.1	□□□□□ -1.91
HBT1	YDL223C	TRM2	P33753	639 aa		3.1	□□□□□ -1.91
HBT1	YDL223C	RRF1	P38771	230 aa		3.1	□□□□□ -1.91
HBT1	YDL223C	FAR3	P46671	204 aa		3.1	□□□□□ -1.91
HBT1	YDL223C	PYK2	P52489	506 aa	Known RBP	3.1	□□□□□ -1.91
HBT1	YDL223C	MNP1	P53163	194 aa	Predicted RBP	3.1	□□□□□ -1.91
HBT1	YDL223C	EMI2	Q04409	500 aa	Known RBP	3.1	□□□□□ -1.91
HBT1	YDL223C	GFD1	Q04839	188 aa	Known RBP	3.1	□□□□□ -1.91
HBT1	YDL223C	YDL057W	Q07379	328 aa		3.1	□□□□□ -1.91
HBT1	YDL223C	YLR111W	Q12528	110 aa		3.1	□□□□□ -1.91
HBT1	YDL223C	COX3	P00420	269 aa		3.1	□□□□□ -1.91
HBT1	YDL223C	COR1	P07256	457 aa		3.1	□□□□□ -1.91
HBT1	YDL223C	KIN3	P22209	435 aa		3.1	□□□□□ -1.91
HBT1	YDL223C	MAK31	P23059	88 aa		3.1	□□□□□ -1.91
HBT1	YDL223C	BOS1	P25385	244 aa		3.1	□□□□□ -1.91
HBT1	YDL223C	RPS2	P25443	254 aa	Known RBP	3.1	□□□□□ -1.91
HBT1	YDL223C	PPZ1	P26570	692 aa		3.1	□□□□□ -1.91
HBT1	YDL223C	BRF1	P29056	596 aa		3.1	□□□□□ -1.91
HBT1	YDL223C	FTH1	P38310	465 aa		3.1	□□□□□ -1.91
HBT1	YDL223C	VPS41	P38959	992 aa		3.1	□□□□□ -1.91
HBT1	YDL223C	CSM2	P40465	213 aa		3.1	□□□□□ -1.91
HBT1	YDL223C	LYS20	P48570	428 aa	Known RBP	3.1	□□□□□ -1.91
HBT1	YDL223C	YNR068C	P53754	272 aa		3.1	□□□□□ -1.91
HBT1	YDL223C	EAF7	P53911	425 aa	Known RBP	3.1	□□□□□ -1.91
HBT1	YDL223C	TMN2	Q04562	672 aa		3.1	□□□□□ -1.91
HBT1	YDL223C	DON1	Q05610	365 aa		3.1	□□□□□ -1.91
HBT1	YDL223C	VTA1	Q06263	330 aa		3.1	□□□□□ -1.91
HBT1	YDL223C	ULA1	Q12059	462 aa		3.1	□□□□□ -1.91
HBT1	YDL223C	FKS1	P38631	1876 aa	Known RBP	3.09	□□□□□ -1.91
HBT1	YDL223C	GAL4	P04386	881 aa		3.09	□□□□□ -1.91
HBT1	YDL223C	CLB2	P24869	491 aa		3.09	□□□□□ -1.91
HBT1	YDL223C	YKL100C	P34248	587 aa		3.09	□□□□□ -1.91
HBT1	YDL223C	ICS2	P38284	255 aa		3.09	□□□□□ -1.91
HBT1	YDL223C	MBB1	P39534	108 aa		3.09	□□□□□ -1.91
HBT1	YDL223C	PTR3	P43606	678 aa		3.09	□□□□□ -1.91
HBT1	YDL223C	FYV8	P46949	817 aa	Known RBP	3.09	□□□□□ -1.91
HBT1	YDL223C	ATG27	P46989	271 aa		3.09	□□□□□ -1.91
HBT1	YDL223C	YJL043W	P47053	257 aa		3.09	□□□□□ -1.91
HBT1	YDL223C	LIF1	P53150	421 aa		3.09	□□□□□ -1.91
HBT1	YDL223C	ERG26	P53199	349 aa	Known RBP	3.09	□□□□□ -1.91
HBT1	YDL223C	LSB1	P53281	241 aa		3.09	□□□□□ -1.91
HBT1	YDL223C	PRO2	P54885	456 aa	Known RBP	3.09	□□□□□ -1.91
HBT1	YDL223C	PFA4	Q12006	378 aa		3.09	□□□□□ -1.91
HBT1	YDL223C	PUS9	Q12069	462 aa		3.09	□□□□□ -1.91
HBT1	YDL223C	ACF2	Q12168	779 aa		3.09	□□□□□ -1.91
HBT1	YDL223C	RAD50	P12753	1312 aa		3.09	□□□□□ -1.91
HBT1	YDL223C	TY1B-A	O13527	1196 aa	Known RBP	3.09	□□□□□ -1.92
HBT1	YDL223C	RAP1	P11938	827 aa		3.09	□□□□□ -1.92
HBT1	YDL223C	SNA3	P14359	133 aa		3.09	□□□□□ -1.92
HBT1	YDL223C	REC107	P21651	314 aa		3.09	□□□□□ -1.92
HBT1	YDL223C	HCS1	P34243	683 aa		3.09	□□□□□ -1.92
HBT1	YDL223C	ALT2	P52892	507 aa		3.09	□□□□□ -1.92
HBT1	YDL223C	YGL108C	P53139	140 aa		3.09	□□□□□ -1.92
HBT1	YDL223C	MDM30	Q05930	598 aa		3.09	□□□□□ -1.92
HBT1	YDL223C	YOR389W	Q08912	624 aa		3.09	□□□□□ -1.92
HBT1	YDL223C	VPS54	Q12071	889 aa		3.09	□□□□□ -1.92
HBT1	YDL223C	MAS2	P11914	482 aa		3.08	□□□□□ -1.92
HBT1	YDL223C	PRP2	P20095	876 aa	Predicted RBP	3.08	□□□□□ -1.92
HBT1	YDL223C	BUD5	P25300	642 aa	Predicted RBP	3.08	□□□□□ -1.92
HBT1	YDL223C	SAT4	P25333	603 aa	Known RBP	3.08	□□□□□ -1.92
HBT1	YDL223C	GSY2	P27472	705 aa		3.08	□□□□□ -1.92
HBT1	YDL223C	GAC1	P28006	793 aa		3.08	□□□□□ -1.92
HBT1	YDL223C	SMI1	P32566	505 aa		3.08	□□□□□ -1.92
HBT1	YDL223C	YHR131C	P38835	850 aa		3.08	□□□□□ -1.92
HBT1	YDL223C	FAD1	P38913	306 aa		3.08	□□□□□ -1.92
HBT1	YDL223C	UBP5	P39944	805 aa		3.08	□□□□□ -1.92
HBT1	YDL223C	OCA2	P53949	197 aa		3.08	□□□□□ -1.92
HBT1	YDL223C	DCI1	Q08558	271 aa		3.08	□□□□□ -1.92
HBT1	YDL223C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
HBT1	YDL223C	FRE7	Q12333	620 aa		3.08	□□□□□ -1.92
HBT1	YDL223C	RAD52	P06778	471 aa	Known RBP	3.08	□□□□□ -1.92
HBT1	YDL223C	PUT2	P07275	575 aa		3.08	□□□□□ -1.92
HBT1	YDL223C	SEC63	P14906	663 aa		3.08	□□□□□ -1.92
HBT1	YDL223C	SPC110	P32380	944 aa		3.08	□□□□□ -1.92
HBT1	YDL223C	YGR149W	P48236	432 aa		3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms