RNA–Protein interactions for RNA: YDL070W

BDF2, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF2, Length 1,917 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF2YDL070W YNL018CP53976 612 aa6.42□□□□□ -1.38
BDF2YDL070W RPL6AQ02326 176 aaKnown RBP6.42□□□□□ -1.38
BDF2YDL070W RLI1Q03195 608 aaKnown RBP6.42□□□□□ -1.38
BDF2YDL070W MRN1Q08925 612 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38not detected
BDF2YDL070W MCD1Q12158 566 aa6.42□□□□□ -1.38
BDF2YDL070W JLP1Q12358 412 aa6.42□□□□□ -1.38
BDF2YDL070W APE1P14904 514 aa6.42□□□□□ -1.38
BDF2YDL070W DBP3P20447 523 aaKnown RBP6.42□□□□□ -1.38
BDF2YDL070W DPH2P32461 534 aa6.42□□□□□ -1.38
BDF2YDL070W MSS1P32559 526 aaPredicted RBP6.42□□□□□ -1.38
BDF2YDL070W YGL015CP33199 130 aa6.42□□□□□ -1.38
BDF2YDL070W LST4P34239 828 aa6.42□□□□□ -1.38
BDF2YDL070W RIB1P38066 345 aa6.42□□□□□ -1.38
BDF2YDL070W YBR056WP38081 501 aa6.42□□□□□ -1.38
BDF2YDL070W FTH1P38310 465 aa6.42□□□□□ -1.38
BDF2YDL070W MUP3P38734 546 aa6.42□□□□□ -1.38
BDF2YDL070W SFB3P38810 929 aa6.42□□□□□ -1.38
BDF2YDL070W ERV46P39727 415 aa6.42□□□□□ -1.38
BDF2YDL070W YIR007WP40566 764 aa6.42□□□□□ -1.38
BDF2YDL070W NUP85P46673 744 aa6.42□□□□□ -1.38
BDF2YDL070W PFD1P46988 109 aa6.42□□□□□ -1.38
BDF2YDL070W MDV1P47025 714 aa6.42□□□□□ -1.38
BDF2YDL070W NOP13P53883 403 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38not detected
BDF2YDL070W NPL3Q01560 414 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38not detected
BDF2YDL070W TRS31Q03337 283 aa6.42□□□□□ -1.38
BDF2YDL070W YMR010WQ03687 405 aa6.42□□□□□ -1.38
BDF2YDL070W YDR249CQ03787 373 aa6.42□□□□□ -1.38
BDF2YDL070W ARO10Q06408 635 aa6.42□□□□□ -1.38
BDF2YDL070W UBR2Q07963 1872 aa6.42□□□□□ -1.38
BDF2YDL070W GPB1Q08886 897 aa6.42□□□□□ -1.38
BDF2YDL070W YPL199CQ08954 240 aa6.42□□□□□ -1.38
BDF2YDL070W MAM3Q12296 706 aa6.42□□□□□ -1.38
BDF2YDL070W YHR213W-AQ8TGT4 77 aa6.42□□□□□ -1.38
BDF2YDL070W MOT1P32333 1867 aa6.41□□□□□ -1.38
BDF2YDL070W DAP2P18962 818 aa6.41□□□□□ -1.38
BDF2YDL070W AAT2P23542 418 aaKnown RBP6.41□□□□□ -1.38
BDF2YDL070W LRE1P25579 583 aaKnown RBP6.41□□□□□ -1.38
BDF2YDL070W ERG9P29704 444 aa6.41□□□□□ -1.38
BDF2YDL070W UTR4P32626 227 aa6.41□□□□□ -1.38
BDF2YDL070W SKT5P34226 696 aa6.41□□□□□ -1.38
BDF2YDL070W MRPL7P36519 292 aa6.41□□□□□ -1.38
BDF2YDL070W APT2P36973 181 aa6.41□□□□□ -1.38
BDF2YDL070W STP2P38704 541 aa6.41□□□□□ -1.38
BDF2YDL070W RRP4P38792 359 aaKnown RBP6.41□□□□□ -1.38
BDF2YDL070W YAP1801P38856 637 aa6.41□□□□□ -1.38
BDF2YDL070W ULI1P43604 169 aa6.41□□□□□ -1.38
BDF2YDL070W ACF4P47129 309 aa6.41□□□□□ -1.38
BDF2YDL070W ISM1P48526 1002 aa6.41□□□□□ -1.38
BDF2YDL070W PRM8P53174 237 aa6.41□□□□□ -1.38
BDF2YDL070W FMP48P53233 369 aa6.41□□□□□ -1.38
BDF2YDL070W YMD8Q03697 442 aa6.41□□□□□ -1.38
BDF2YDL070W DBP9Q06218 594 aaKnown RBP6.41□□□□□ -1.38
BDF2YDL070W CDD1Q06549 142 aa6.41□□□□□ -1.38
BDF2YDL070W YDL073WQ07454 984 aa6.41□□□□□ -1.38
BDF2YDL070W RSC58Q07979 502 aa6.41□□□□□ -1.38
BDF2YDL070W THP1Q08231 455 aa6.41□□□□□ -1.38
BDF2YDL070W SYC1Q08553 188 aaPredicted RBP6.41□□□□□ -1.38
BDF2YDL070W ENV7Q12003 364 aa6.41□□□□□ -1.38
BDF2YDL070W GPM2Q12008 311 aa6.41□□□□□ -1.38
BDF2YDL070W CPR3P25719 182 aa6.4□□□□□ -1.38
BDF2YDL070W CAM1P29547 415 aaKnown RBP6.4□□□□□ -1.38
BDF2YDL070W MRPL3P36516 390 aa6.4□□□□□ -1.38
BDF2YDL070W ATP3P38077 311 aaKnown RBP6.4□□□□□ -1.38
BDF2YDL070W AGP2P38090 596 aa6.4□□□□□ -1.38
BDF2YDL070W MRP21P38175 177 aa6.4□□□□□ -1.38
BDF2YDL070W REG2P38232 338 aa6.4□□□□□ -1.38
BDF2YDL070W NDE1P40215 560 aa6.4□□□□□ -1.38
BDF2YDL070W RPS10BP46784 105 aaKnown RBP6.4□□□□□ -1.38
BDF2YDL070W BOL2P53082 120 aa6.4□□□□□ -1.38
BDF2YDL070W NRD1P53617 575 aaKnown RBP RIP-Chip data6.4□□□□□ -1.38not detected
BDF2YDL070W SLG1P54867 378 aa6.4□□□□□ -1.38
BDF2YDL070W YPL068CQ02749 293 aa6.4□□□□□ -1.38
BDF2YDL070W NHP10Q03435 203 aa6.4□□□□□ -1.38
BDF2YDL070W SKY1Q03656 742 aa6.4□□□□□ -1.38
BDF2YDL070W RPS10AQ08745 105 aaPredicted RBP6.4□□□□□ -1.38
BDF2YDL070W RPS17AP02407 136 aaKnown RBP6.4□□□□□ -1.39
BDF2YDL070W HTA2P04912 132 aa6.4□□□□□ -1.39
BDF2YDL070W RAD52P06778 471 aaKnown RBP6.4□□□□□ -1.39
BDF2YDL070W RPS4AP0CX35 261 aaKnown RBP6.4□□□□□ -1.39
BDF2YDL070W RPS4BP0CX36 261 aaKnown RBP6.4□□□□□ -1.39
BDF2YDL070W MAS1P10507 462 aa6.4□□□□□ -1.39
BDF2YDL070W RPS17BP14127 136 aaKnown RBP6.4□□□□□ -1.39
BDF2YDL070W YDJ1P25491 409 aaKnown RBP6.4□□□□□ -1.39
BDF2YDL070W MCM7P38132 845 aa6.4□□□□□ -1.39
BDF2YDL070W HAT2P39984 401 aa6.4□□□□□ -1.39
BDF2YDL070W SKP2P42843 763 aa6.4□□□□□ -1.39
BDF2YDL070W LSM1P47017 172 aaKnown RBP6.4□□□□□ -1.39
BDF2YDL070W SSN8P47821 323 aa6.4□□□□□ -1.39
BDF2YDL070W MAL11P53048 616 aa6.4□□□□□ -1.39
BDF2YDL070W PEX31P53203 462 aa6.4□□□□□ -1.39
BDF2YDL070W KTR6P54070 446 aa6.4□□□□□ -1.39
BDF2YDL070W NSE5Q03718 556 aa6.4□□□□□ -1.39
BDF2YDL070W SPO20Q04359 397 aa6.4□□□□□ -1.39
BDF2YDL070W PHO92Q06390 306 aa6.4□□□□□ -1.39
BDF2YDL070W MFG1Q07684 458 aa6.4□□□□□ -1.39
BDF2YDL070W ICL2Q12031 575 aa6.4□□□□□ -1.39
BDF2YDL070W SUS1Q6WNK7 96 aa6.4□□□□□ -1.39
BDF2YDL070W CDC4P07834 779 aa6.39□□□□□ -1.39
BDF2YDL070W SPS1P08458 490 aa6.39□□□□□ -1.39
BDF2YDL070W BAR1P12630 587 aa6.39□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms