RNA–Protein interactions for RNA: YDL030W

PRP9, Transcript of Subunit of the SF3a splicing factor complex, yeast

Gene PRP9, Length 1,593 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP9	YDL030W	ZPR1	P53303	486 aa	Known RBP	4.27	□□□□□ -1.73
PRP9	YDL030W	VTI1	Q04338	217 aa		4.27	□□□□□ -1.73
PRP9	YDL030W	USO1	P25386	1790 aa		4.26	□□□□□ -1.73
PRP9	YDL030W	LPD1	P09624	499 aa	Known RBP	4.26	□□□□□ -1.73
PRP9	YDL030W	YML002W	P0CF17	737 aa		4.26	□□□□□ -1.73
PRP9	YDL030W	PMS1	P14242	873 aa		4.26	□□□□□ -1.73
PRP9	YDL030W	TYR1	P20049	452 aa		4.26	□□□□□ -1.73
PRP9	YDL030W	PWP1	P21304	576 aa	Known RBP	4.26	□□□□□ -1.73
PRP9	YDL030W	PAP1	P29468	568 aa	Known RBP	4.26	□□□□□ -1.73
PRP9	YDL030W	IMP2'	P32351	346 aa		4.26	□□□□□ -1.73
PRP9	YDL030W	HXT1	P32465	570 aa		4.26	□□□□□ -1.73
PRP9	YDL030W	GCG1	P32656	232 aa	Known RBP	4.26	□□□□□ -1.73
PRP9	YDL030W	YET1	P35723	206 aa		4.26	□□□□□ -1.73
PRP9	YDL030W	ECM4	P36156	370 aa		4.26	□□□□□ -1.73
PRP9	YDL030W	SRL3	P36167	246 aa		4.26	□□□□□ -1.73
PRP9	YDL030W	TSC10	P38342	320 aa		4.26	□□□□□ -1.73
PRP9	YDL030W	RRP3	P38712	501 aa	Known RBP	4.26	□□□□□ -1.73
PRP9	YDL030W	ELO1	P39540	310 aa		4.26	□□□□□ -1.73
PRP9	YDL030W	TMA22	P47089	198 aa	Predicted RBP	4.26	□□□□□ -1.73
PRP9	YDL030W	LSG1	P53145	640 aa	Known RBP	4.26	□□□□□ -1.73
PRP9	YDL030W	YKU80	Q04437	629 aa		4.26	□□□□□ -1.73
PRP9	YDL030W	YPR172W	Q06608	200 aa		4.26	□□□□□ -1.73
PRP9	YDL030W	RIX7	Q07844	837 aa	Known RBP	4.26	□□□□□ -1.73
PRP9	YDL030W	SSP2	Q08646	371 aa		4.26	□□□□□ -1.73
PRP9	YDL030W	TCO89	Q08921	799 aa		4.26	□□□□□ -1.73
PRP9	YDL030W	LEU9	Q12166	604 aa	Known RBP	4.26	□□□□□ -1.73
PRP9	YDL030W	RIO1	Q12196	484 aa	Known RBP	4.26	□□□□□ -1.73
PRP9	YDL030W	SKM1	Q12469	655 aa		4.26	□□□□□ -1.73
PRP9	YDL030W	APC1	P53886	1748 aa		4.25	□□□□□ -1.73
PRP9	YDL030W	FUM1	P08417	488 aa	Known RBP	4.25	□□□□□ -1.73
PRP9	YDL030W	SPO12	P17123	173 aa		4.25	□□□□□ -1.73
PRP9	YDL030W	TRX2	P22803	104 aa	Known RBP	4.25	□□□□□ -1.73
PRP9	YDL030W	ADH7	P25377	361 aa		4.25	□□□□□ -1.73
PRP9	YDL030W	YCR051W	P25631	222 aa		4.25	□□□□□ -1.73
PRP9	YDL030W	CSE1	P33307	960 aa		4.25	□□□□□ -1.73
PRP9	YDL030W	AGP2	P38090	596 aa		4.25	□□□□□ -1.73
PRP9	YDL030W	VID27	P40157	782 aa		4.25	□□□□□ -1.73
PRP9	YDL030W	YJL068C	P40363	299 aa		4.25	□□□□□ -1.73
PRP9	YDL030W	INA22	P40576	216 aa		4.25	□□□□□ -1.73
PRP9	YDL030W	EPL1	P43572	832 aa		4.25	□□□□□ -1.73
PRP9	YDL030W	ARC1	P46672	376 aa	Known RBP	4.25	□□□□□ -1.73
PRP9	YDL030W	SIP4	P46954	829 aa		4.25	□□□□□ -1.73
PRP9	YDL030W	BSC5	P53755	489 aa		4.25	□□□□□ -1.73
PRP9	YDL030W	YMR111C	Q04461	462 aa	Predicted RBP	4.25	□□□□□ -1.73
PRP9	YDL030W	TMA64	Q04600	565 aa	Known RBP	4.25	□□□□□ -1.73
PRP9	YDL030W	MMR1	Q06324	491 aa		4.25	□□□□□ -1.73
PRP9	YDL030W	ENT4	Q07872	247 aa		4.25	□□□□□ -1.73
PRP9	YDL030W	DAP1	Q12091	152 aa		4.25	□□□□□ -1.73
PRP9	YDL030W	OCA6	Q12454	224 aa		4.25	□□□□□ -1.73
PRP9	YDL030W	YMR230W-A	Q3E7B5	62 aa		4.25	□□□□□ -1.73
PRP9	YDL030W	ARG4	P04076	463 aa	Predicted RBP	4.24	□□□□□ -1.73
PRP9	YDL030W	PUT2	P07275	575 aa		4.24	□□□□□ -1.73
PRP9	YDL030W	CDC24	P11433	854 aa	Predicted RBP	4.24	□□□□□ -1.73
PRP9	YDL030W	SNC1	P31109	117 aa		4.24	□□□□□ -1.73
PRP9	YDL030W	ERG1	P32476	496 aa	Known RBP	4.24	□□□□□ -1.73
PRP9	YDL030W	ROT2	P38138	954 aa		4.24	□□□□□ -1.73
PRP9	YDL030W	FZO1	P38297	855 aa		4.24	□□□□□ -1.73
PRP9	YDL030W	HSM3	P38348	480 aa		4.24	□□□□□ -1.73
PRP9	YDL030W	TDA11	P38854	504 aa		4.24	□□□□□ -1.73
PRP9	YDL030W	TIF4631	P39935	952 aa	Known RBP	4.24	□□□□□ -1.73
PRP9	YDL030W	AXL1	P40851	1208 aa		4.24	□□□□□ -1.73
PRP9	YDL030W	SHE10	P53075	577 aa		4.24	□□□□□ -1.73
PRP9	YDL030W	ERG26	P53199	349 aa	Known RBP	4.24	□□□□□ -1.73
PRP9	YDL030W	EBS1	Q03466	884 aa	Known RBP	4.24	□□□□□ -1.73
PRP9	YDL030W	YML108W	Q03759	105 aa		4.24	□□□□□ -1.73
PRP9	YDL030W	SOV1	Q04748	898 aa		4.24	□□□□□ -1.73
PRP9	YDL030W	RTT103	Q05543	409 aa		4.24	□□□□□ -1.73
PRP9	YDL030W	ECM30	Q06673	1274 aa		4.24	□□□□□ -1.73
PRP9	YDL030W	OPY2	Q06810	360 aa		4.24	□□□□□ -1.73
PRP9	YDL030W	SSK1	Q07084	712 aa		4.24	□□□□□ -1.73
PRP9	YDL030W	GRC3	Q07845	632 aa		4.24	□□□□□ -1.73
PRP9	YDL030W	DNL4	Q08387	944 aa	Predicted RBP	4.24	□□□□□ -1.73
PRP9	YDL030W	IES3	Q12345	250 aa		4.24	□□□□□ -1.73
PRP9	YDL030W	ARP6	Q12509	438 aa		4.24	□□□□□ -1.73
PRP9	YDL030W	SIN4	P32259	974 aa		4.23	□□□□□ -1.73
PRP9	YDL030W	RME1	P32338	300 aa	Known RBP	4.23	□□□□□ -1.73
PRP9	YDL030W	VPH2	P32341	215 aa		4.23	□□□□□ -1.73
PRP9	YDL030W	SMY1	P32364	656 aa	Known RBP	4.23	□□□□□ -1.73
PRP9	YDL030W	SPC34	P36131	295 aa		4.23	□□□□□ -1.73
PRP9	YDL030W	SIP3	P38717	1229 aa		4.23	□□□□□ -1.73
PRP9	YDL030W	SMC2	P38989	1170 aa	Known RBP	4.23	□□□□□ -1.73
PRP9	YDL030W	CCT2	P39076	527 aa	Known RBP	4.23	□□□□□ -1.73
PRP9	YDL030W	DIM1	P41819	318 aa	Known RBP	4.23	□□□□□ -1.73
PRP9	YDL030W	GUF1	P46943	645 aa		4.23	□□□□□ -1.73
PRP9	YDL030W	TDA7	P53882	636 aa	Predicted RBP	4.23	□□□□□ -1.73
PRP9	YDL030W	BNI5	P53890	448 aa	Known RBP	4.23	□□□□□ -1.73
PRP9	YDL030W	RAD30	Q04049	632 aa		4.23	□□□□□ -1.73
PRP9	YDL030W	YMR018W	Q04364	514 aa		4.23	□□□□□ -1.73
PRP9	YDL030W	DAS2	Q12084	232 aa		4.23	□□□□□ -1.73
PRP9	YDL030W	NCA2	Q12374	616 aa		4.23	□□□□□ -1.73
PRP9	YDL030W	PET494	P07390	489 aa	Predicted RBP	4.23	□□□□□ -1.73
PRP9	YDL030W	PDA1	P16387	420 aa	Known RBP	4.23	□□□□□ -1.73
PRP9	YDL030W	PRO3	P32263	286 aa	Known RBP	4.23	□□□□□ -1.73
PRP9	YDL030W	COY1	P34237	679 aa		4.23	□□□□□ -1.73
PRP9	YDL030W	BMH2	P34730	273 aa	Known RBP	4.23	□□□□□ -1.73
PRP9	YDL030W	RTS1	P38903	757 aa		4.23	□□□□□ -1.73
PRP9	YDL030W	MET18	P40469	1032 aa		4.23	□□□□□ -1.73
PRP9	YDL030W	SYG1	P40528	902 aa		4.23	□□□□□ -1.73
PRP9	YDL030W	AIP1	P46680	615 aa	Known RBP	4.23	□□□□□ -1.73
PRP9	YDL030W	RPS10B	P46784	105 aa	Known RBP	4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms