RNA–Protein interactions for RNA: YCL020W

YCL020W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YCL020W, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCL020WYCL020W GOR1P53839 350 aa2.97□□□□□ -1.93
YCL020WYCL020W SIL1Q08199 421 aa2.97□□□□□ -1.93
YCL020WYCL020W THP3Q12049 470 aaKnown RBP2.97□□□□□ -1.93
YCL020WYCL020W GRX6Q12438 231 aa2.97□□□□□ -1.93
YCL020WYCL020W HIP1P06775 603 aa2.96□□□□□ -1.93
YCL020WYCL020W SAM1P10659 382 aaKnown RBP2.96□□□□□ -1.93
YCL020WYCL020W PMR1P13586 950 aa2.96□□□□□ -1.93
YCL020WYCL020W CKA1P15790 372 aa2.96□□□□□ -1.93
YCL020WYCL020W SAM2P19358 384 aaKnown RBP2.96□□□□□ -1.93
YCL020WYCL020W ROX1P25042 368 aa2.96□□□□□ -1.93
YCL020WYCL020W YCR100CP25606 316 aa2.96□□□□□ -1.93
YCL020WYCL020W HXT3P32466 567 aaKnown RBP2.96□□□□□ -1.93
YCL020WYCL020W MFT1P33441 392 aaKnown RBP2.96□□□□□ -1.93
YCL020WYCL020W SAS3P34218 831 aa2.96□□□□□ -1.93
YCL020WYCL020W RSM22P36056 628 aa2.96□□□□□ -1.93
YCL020WYCL020W YCR041WP37265 110 aa2.96□□□□□ -1.93
YCL020WYCL020W SMF1P38925 575 aa2.96□□□□□ -1.93
YCL020WYCL020W IRC6P43615 237 aa2.96□□□□□ -1.93
YCL020WYCL020W MRPL19P53875 158 aa2.96□□□□□ -1.93
YCL020WYCL020W LEU4P06208 619 aaKnown RBP2.95□□□□□ -1.94
YCL020WYCL020W MRP7P12687 371 aa2.95□□□□□ -1.94
YCL020WYCL020W ARF3P40994 183 aaRIP-Chip data2.95□□□□□ -1.94not detected
YCL020WYCL020W OST1P41543 476 aaKnown RBP2.95□□□□□ -1.94
YCL020WYCL020W YPI1P43587 155 aa2.95□□□□□ -1.94
YCL020WYCL020W YJL132WP47014 750 aa2.95□□□□□ -1.94
YCL020WYCL020W COG4Q06096 861 aa2.95□□□□□ -1.94
YCL020WYCL020W YOR387CQ08910 206 aa2.95□□□□□ -1.94
YCL020WYCL020W YLR278CQ05854 1341 aa2.95□□□□□ -1.94
YCL020WYCL020W NAM9P27929 486 aa2.94□□□□□ -1.94
YCL020WYCL020W RAD14P28519 371 aa2.94□□□□□ -1.94
YCL020WYCL020W SEC66P33754 206 aa2.94□□□□□ -1.94
YCL020WYCL020W TAF11Q04226 346 aa2.94□□□□□ -1.94
YCL020WYCL020W RTN2Q12443 393 aa2.94□□□□□ -1.94
YCL020WYCL020W RPN12P32496 274 aa2.93□□□□□ -1.94
YCL020WYCL020W NIP100P33420 868 aa2.93□□□□□ -1.94
YCL020WYCL020W NAT2P37293 288 aa2.93□□□□□ -1.94
YCL020WYCL020W CCT2P39076 527 aaKnown RBP2.93□□□□□ -1.94
YCL020WYCL020W RPA49Q01080 415 aaPredicted RBP2.93□□□□□ -1.94
YCL020WYCL020W YDR387CQ04162 555 aa2.93□□□□□ -1.94
YCL020WYCL020W PGA3Q12746 312 aaKnown RBP2.93□□□□□ -1.94
YCL020WYCL020W LPD1P09624 499 aaKnown RBP2.93□□□□□ -1.94
YCL020WYCL020W YAR066WP0CX18 203 aa2.93□□□□□ -1.94
YCL020WYCL020W YHR214WP0CX19 203 aa2.93□□□□□ -1.94
YCL020WYCL020W REV1P12689 985 aa2.93□□□□□ -1.94
YCL020WYCL020W RED1P14291 827 aa2.93□□□□□ -1.94
YCL020WYCL020W HEM15P16622 393 aa2.93□□□□□ -1.94
YCL020WYCL020W ITR1P30605 584 aa2.93□□□□□ -1.94
YCL020WYCL020W ERG3P32353 365 aa2.93□□□□□ -1.94
YCL020WYCL020W CBP4P37267 147 aa2.93□□□□□ -1.94
YCL020WYCL020W NDT80P38830 627 aa2.93□□□□□ -1.94
YCL020WYCL020W YFL067WP43537 175 aa2.93□□□□□ -1.94
YCL020WYCL020W CAF40P53829 373 aa2.93□□□□□ -1.94
YCL020WYCL020W YIF1P53845 314 aaKnown RBP2.93□□□□□ -1.94
YCL020WYCL020W SUB1P54000 292 aaKnown RBP2.93□□□□□ -1.94
YCL020WYCL020W RQC1Q05468 723 aaKnown RBP2.93□□□□□ -1.94
YCL020WYCL020W MRPL35Q06678 367 aa2.93□□□□□ -1.94
YCL020WYCL020W YPL199CQ08954 240 aa2.93□□□□□ -1.94
YCL020WYCL020W TMS1Q12116 473 aa2.93□□□□□ -1.94
YCL020WYCL020W YPR022CQ12139 1133 aa2.93□□□□□ -1.94
YCL020WYCL020W BRR1Q99177 341 aaPredicted RBP2.93□□□□□ -1.94
YCL020WYCL020W INH1P01097 85 aa2.92□□□□□ -1.94
YCL020WYCL020W NOP1P15646 327 aaKnown RBP2.92□□□□□ -1.94
YCL020WYCL020W CPR4P25334 318 aa2.92□□□□□ -1.94
YCL020WYCL020W SWH1P35845 1188 aa2.92□□□□□ -1.94
YCL020WYCL020W SWD3P38123 315 aa2.92□□□□□ -1.94
YCL020WYCL020W TFG2P41896 400 aaPredicted RBP2.92□□□□□ -1.94
YCL020WYCL020W GPD2P41911 440 aaKnown RBP2.92□□□□□ -1.94
YCL020WYCL020W YIP1P53039 248 aa2.92□□□□□ -1.94
YCL020WYCL020W MDM1Q01846 1127 aa2.92□□□□□ -1.94
YCL020WYCL020W ELP3Q02908 557 aaKnown RBP2.92□□□□□ -1.94
YCL020WYCL020W ODC1Q03028 310 aa2.92□□□□□ -1.94
YCL020WYCL020W SYF1Q04048 859 aaPredicted RBP2.92□□□□□ -1.94
YCL020WYCL020W RHO2P06781 192 aa2.91□□□□□ -1.94
YCL020WYCL020W RPI1P23250 407 aaKnown RBP2.91□□□□□ -1.94
YCL020WYCL020W DEG1P31115 442 aaKnown RBP2.91□□□□□ -1.94
YCL020WYCL020W PRP21P32524 280 aaPredicted RBP2.91□□□□□ -1.94
YCL020WYCL020W PNG1Q02890 363 aa2.91□□□□□ -1.94
YCL020WYCL020W ARX1Q03862 593 aaKnown RBP2.91□□□□□ -1.94
YCL020WYCL020W SOV1Q04748 898 aa2.91□□□□□ -1.94
YCL020WYCL020W PBA1Q05778 276 aa2.91□□□□□ -1.94
YCL020WYCL020W TSR2Q06672 205 aaKnown RBP2.91□□□□□ -1.94
YCL020WYCL020W TSR1Q07381 788 aaKnown RBP2.91□□□□□ -1.94
YCL020WYCL020W CLN3P13365 580 aa2.9□□□□□ -1.95
YCL020WYCL020W APE2P32454 952 aaKnown RBP2.9□□□□□ -1.95
YCL020WYCL020W YBL059WP34224 193 aa2.9□□□□□ -1.95
YCL020WYCL020W YBR137WP38276 179 aa2.9□□□□□ -1.95
YCL020WYCL020W YBP1P38315 674 aa2.9□□□□□ -1.95
YCL020WYCL020W SAS2P40963 338 aa2.9□□□□□ -1.95
YCL020WYCL020W WWM1P43582 211 aaKnown RBP2.9□□□□□ -1.95
YCL020WYCL020W VTC2P43585 828 aa2.9□□□□□ -1.95
YCL020WYCL020W NCA3P46955 337 aa2.9□□□□□ -1.95
YCL020WYCL020W URB2P47108 1174 aa2.9□□□□□ -1.95
YCL020WYCL020W RMD9P53140 646 aaKnown RBP2.9□□□□□ -1.95
YCL020WYCL020W YGR250CP53316 781 aaKnown RBP2.9□□□□□ -1.95
YCL020WYCL020W OGG1P53397 376 aaPredicted RBP2.9□□□□□ -1.95
YCL020WYCL020W ERV2Q12284 196 aa2.9□□□□□ -1.95
YCL020WYCL020W SPS4P09937 338 aa2.89□□□□□ -1.95
YCL020WYCL020W SEC63P14906 663 aa2.89□□□□□ -1.95
YCL020WYCL020W ECM25P32525 599 aa2.89□□□□□ -1.95
YCL020WYCL020W VHC1P38329 1120 aa2.89□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms