RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C HEM1P09950 548 aaPredicted RBP2.28□□□□□ -2.05
CLN3YAL040C MAS1P10507 462 aa2.28□□□□□ -2.05
CLN3YAL040C LAT1P12695 482 aaKnown RBP2.28□□□□□ -2.05
CLN3YAL040C PRP16P15938 1071 aaPredicted RBP2.28□□□□□ -2.05
CLN3YAL040C HSP26P15992 214 aaKnown RBP RIP-Chip data2.28□□□□□ -2.05not detected
CLN3YAL040C PDE1P22434 369 aa2.28□□□□□ -2.05
CLN3YAL040C ARG1P22768 420 aa2.28□□□□□ -2.05
CLN3YAL040C MRPL25P23369 157 aa2.28□□□□□ -2.05
CLN3YAL040C DMC1P25453 334 aa2.28□□□□□ -2.05
CLN3YAL040C SPB1P25582 841 aaPredicted RBP2.28□□□□□ -2.05
CLN3YAL040C YCL068CP25593 260 aa2.28□□□□□ -2.05
CLN3YAL040C CWH43P25618 953 aa2.28□□□□□ -2.05
CLN3YAL040C IMG2P25642 146 aaPredicted RBP2.28□□□□□ -2.05
CLN3YAL040C DSS4P32601 143 aa2.28□□□□□ -2.05
CLN3YAL040C RAD5P32849 1169 aaPredicted RBP2.28□□□□□ -2.05
CLN3YAL040C CYM1P32898 989 aa2.28□□□□□ -2.05
CLN3YAL040C KES1P35844 434 aaKnown RBP2.28□□□□□ -2.05
CLN3YAL040C SWH1P35845 1188 aa2.28□□□□□ -2.05
CLN3YAL040C HMT1P38074 348 aa2.28□□□□□ -2.05
CLN3YAL040C OTU2P38747 307 aaKnown RBP2.28□□□□□ -2.05
CLN3YAL040C SPC97P38863 823 aa2.28□□□□□ -2.05
CLN3YAL040C YDR089WP38966 869 aa2.28□□□□□ -2.05
CLN3YAL040C GDI1P39958 451 aaKnown RBP2.28□□□□□ -2.05
CLN3YAL040C YEL028WP39989 153 aa2.28□□□□□ -2.05
CLN3YAL040C EDC3P39998 551 aaKnown RBP2.28□□□□□ -2.05
CLN3YAL040C YAT2P40017 923 aa2.28□□□□□ -2.05
CLN3YAL040C GID8P40208 455 aa2.28□□□□□ -2.05
CLN3YAL040C CHS6P40955 746 aa2.28□□□□□ -2.05
CLN3YAL040C TDA10P42938 290 aa2.28□□□□□ -2.05
CLN3YAL040C YFL040WP43562 540 aa2.28□□□□□ -2.05
CLN3YAL040C SSY5P47002 699 aa2.28□□□□□ -2.05
CLN3YAL040C MDE1P47095 244 aa2.28□□□□□ -2.05
CLN3YAL040C MRX6P48564 524 aa2.28□□□□□ -2.05
CLN3YAL040C ASN2P49090 572 aaKnown RBP2.28□□□□□ -2.05
CLN3YAL040C TEL2P53038 688 aa2.28□□□□□ -2.05
CLN3YAL040C SGF73P53165 657 aa2.28□□□□□ -2.05
CLN3YAL040C REG1Q00816 1014 aa2.28□□□□□ -2.05
CLN3YAL040C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.28□□□□□ -2.05not detected
CLN3YAL040C PIR3Q03180 325 aa2.28□□□□□ -2.05
CLN3YAL040C YMR209CQ03648 457 aa2.28□□□□□ -2.05
CLN3YAL040C YMR210WQ03649 449 aa2.28□□□□□ -2.05
CLN3YAL040C MUS81Q04149 632 aaPredicted RBP2.28□□□□□ -2.05
CLN3YAL040C YPS7Q06325 596 aa2.28□□□□□ -2.05
CLN3YAL040C STP4Q07351 490 aa2.28□□□□□ -2.05
CLN3YAL040C YOR387CQ08910 206 aa2.28□□□□□ -2.05
CLN3YAL040C YPL225WQ08971 146 aaKnown RBP2.28□□□□□ -2.05
CLN3YAL040C TGL5Q12043 749 aa2.28□□□□□ -2.05
CLN3YAL040C RCN2Q12044 265 aa2.28□□□□□ -2.05
CLN3YAL040C HUA2Q12134 243 aa2.28□□□□□ -2.05
CLN3YAL040C OCA6Q12454 224 aa2.28□□□□□ -2.05
CLN3YAL040C EFG1Q3E705 233 aaKnown RBP2.28□□□□□ -2.05
CLN3YAL040C AFI1Q99222 893 aa2.28□□□□□ -2.05
CLN3YAL040C RPC40P07703 335 aaKnown RBP2.27□□□□□ -2.05
CLN3YAL040C APE1P14904 514 aa2.27□□□□□ -2.05
CLN3YAL040C MNE1P24720 663 aa2.27□□□□□ -2.05
CLN3YAL040C RRP7P25368 297 aaPredicted RBP2.27□□□□□ -2.05
CLN3YAL040C ADY2P25613 283 aa2.27□□□□□ -2.05
CLN3YAL040C URA10P30402 227 aa2.27□□□□□ -2.05
CLN3YAL040C MRP20P32387 263 aa2.27□□□□□ -2.05
CLN3YAL040C HIS7P33734 552 aaKnown RBP2.27□□□□□ -2.05
CLN3YAL040C KDX1P36005 433 aa2.27□□□□□ -2.05
CLN3YAL040C LIN1P38852 340 aaPredicted RBP2.27□□□□□ -2.05
CLN3YAL040C RIX1P38883 763 aaPredicted RBP2.27□□□□□ -2.05
CLN3YAL040C STN1P38960 494 aa2.27□□□□□ -2.05
CLN3YAL040C PRM9P39551 298 aa2.27□□□□□ -2.05
CLN3YAL040C FMP52P40008 231 aa2.27□□□□□ -2.05
CLN3YAL040C FMP10P40098 244 aa2.27□□□□□ -2.05
CLN3YAL040C PCL7P40186 285 aa2.27□□□□□ -2.05
CLN3YAL040C PEP8P40335 379 aa2.27□□□□□ -2.05
CLN3YAL040C YJL055WP47044 245 aa2.27□□□□□ -2.05
CLN3YAL040C PEX31P53203 462 aa2.27□□□□□ -2.05
CLN3YAL040C COQ6P53318 479 aa2.27□□□□□ -2.05
CLN3YAL040C YPR003CP53394 754 aa2.27□□□□□ -2.05
CLN3YAL040C OGG1P53397 376 aaPredicted RBP2.27□□□□□ -2.05
CLN3YAL040C YNR061CP53747 219 aa2.27□□□□□ -2.05
CLN3YAL040C KTR5P53966 522 aaPredicted RBP2.27□□□□□ -2.05
CLN3YAL040C MGR3Q04472 501 aa2.27□□□□□ -2.05
CLN3YAL040C ERB1Q04660 807 aaKnown RBP2.27□□□□□ -2.05
CLN3YAL040C AIM32Q04689 311 aa2.27□□□□□ -2.05
CLN3YAL040C COQ11Q05892 277 aa2.27□□□□□ -2.05
CLN3YAL040C YSH1Q06224 779 aaPredicted RBP2.27□□□□□ -2.05
CLN3YAL040C MRI1Q06489 411 aaKnown RBP2.27□□□□□ -2.05
CLN3YAL040C SWC7Q06707 132 aa2.27□□□□□ -2.05
CLN3YAL040C YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
CLN3YAL040C NRT1Q08485 598 aa2.27□□□□□ -2.05
CLN3YAL040C IRC13Q08630 104 aa2.27□□□□□ -2.05
CLN3YAL040C TAF10Q12030 206 aa2.27□□□□□ -2.05
CLN3YAL040C APC9Q12107 265 aa2.27□□□□□ -2.05
CLN3YAL040C GPM3Q12326 303 aa2.27□□□□□ -2.05
CLN3YAL040C LDB17Q12342 491 aa2.27□□□□□ -2.05
CLN3YAL040C YMR030W-AQ3E760 96 aa2.27□□□□□ -2.05
CLN3YAL040C YBR126W-AQ8TGU7 68 aa2.27□□□□□ -2.05
CLN3YAL040C CCH1P50077 2039 aa2.27□□□□□ -2.05
CLN3YAL040C HIS1P00498 297 aaKnown RBP2.26□□□□□ -2.05
CLN3YAL040C SUI3P09064 285 aaKnown RBP2.26□□□□□ -2.05
CLN3YAL040C URK1P27515 501 aa2.26□□□□□ -2.05
CLN3YAL040C PET127P32606 800 aa2.26□□□□□ -2.05
CLN3YAL040C TFB1P32776 642 aa2.26□□□□□ -2.05
CLN3YAL040C LOS1P33418 1100 aaPredicted RBP2.26□□□□□ -2.05
CLN3YAL040C HSM3P38348 480 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 556.7 ms