RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 C7P10643 843 aa9.22□□□□□ -0.93
CHD2-213ENST00000628118 RARBP10826 455 aa9.22□□□□□ -0.93
CHD2-213ENST00000628118 CNGA1P29973 690 aa9.22□□□□□ -0.93
CHD2-213ENST00000628118 CCND2P30279 289 aa9.22□□□□□ -0.93
CHD2-213ENST00000628118 CCND3P30281 292 aaPredicted RBP9.22□□□□□ -0.93
CHD2-213ENST00000628118 HMGN5P82970 282 aaKnown RBP9.22□□□□□ -0.93
CHD2-213ENST00000628118 ARRDC4Q8NCT1 418 aa9.22□□□□□ -0.93
CHD2-213ENST00000628118 SLC39A7Q92504 469 aa9.22□□□□□ -0.93
CHD2-213ENST00000628118 GPKOWQ92917 476 aaPredicted RBP eCLIP9.22□□□□□ -0.936e-6■□□□□ 11.1
CHD2-213ENST00000628118 DEFB118Q96PH6 123 aa9.22□□□□□ -0.93
CHD2-213ENST00000628118 PDCD2LQ9BRP1 358 aa9.22□□□□□ -0.93
CHD2-213ENST00000628118 LARP6Q9BRS8 491 aaKnown RBP9.22□□□□□ -0.93
CHD2-213ENST00000628118 KATNBL1Q9H079 304 aa9.22□□□□□ -0.93
CHD2-213ENST00000628118 SPC25Q9HBM1 224 aa9.22□□□□□ -0.93
CHD2-213ENST00000628118 COL20A1Q9P218 1284 aa9.22□□□□□ -0.93
CHD2-213ENST00000628118 ZHX1Q9UKY1 873 aaPredicted RBP9.22□□□□□ -0.93
CHD2-213ENST00000628118 OGDHLQ9ULD0 1010 aa9.22□□□□□ -0.93
CHD2-213ENST00000628118 ASTN1O14525 1302 aa9.22□□□□□ -0.93
CHD2-213ENST00000628118 hCG_1642624A0A1W2PR95 340 aa9.21□□□□□ -0.94
CHD2-213ENST00000628118 TFRCP02786 760 aaKnown RBP9.21□□□□□ -0.94
CHD2-213ENST00000628118 TGFB3P10600 412 aa9.21□□□□□ -0.94
CHD2-213ENST00000628118 HOXA13P31271 388 aaPredicted RBP9.21□□□□□ -0.94
CHD2-213ENST00000628118 CLK2P49760 499 aaKnown RBP9.21□□□□□ -0.94
CHD2-213ENST00000628118 RGS19P49795 217 aa9.21□□□□□ -0.94
CHD2-213ENST00000628118 NKX3-2P78367 333 aa9.21□□□□□ -0.94
CHD2-213ENST00000628118 TTLL4Q14679 1199 aa9.21□□□□□ -0.94
CHD2-213ENST00000628118 PGM5Q15124 567 aa9.21□□□□□ -0.94
CHD2-213ENST00000628118 GNPTABQ3T906 1256 aa9.21□□□□□ -0.94
CHD2-213ENST00000628118 IER5LQ5T953 404 aa9.21□□□□□ -0.94
CHD2-213ENST00000628118 PCNX4Q63HM2 1172 aa9.21□□□□□ -0.94
CHD2-213ENST00000628118 VSIG10LQ86VR7 867 aa9.21□□□□□ -0.94
CHD2-213ENST00000628118 FCHSD1Q86WN1 690 aa9.21□□□□□ -0.94
CHD2-213ENST00000628118 HS6ST3Q8IZP7 471 aa9.21□□□□□ -0.94
CHD2-213ENST00000628118 DAGLBQ8NCG7 672 aa9.21□□□□□ -0.94
CHD2-213ENST00000628118 TRPV1Q8NER1 839 aa9.21□□□□□ -0.94
CHD2-213ENST00000628118 SCFD2Q8WU76 684 aa9.21□□□□□ -0.94
CHD2-213ENST00000628118 ORC3Q9UBD5 711 aaPredicted RBP9.21□□□□□ -0.94
CHD2-213ENST00000628118 KIF3AQ9Y496 699 aa9.21□□□□□ -0.94
CHD2-213ENST00000628118 STK24Q9Y6E0 443 aa9.21□□□□□ -0.94
CHD2-213ENST00000628118 HTTP42858 3142 aa9.2□□□□□ -0.94
CHD2-213ENST00000628118 POTEFA5A3E0 1075 aa9.2□□□□□ -0.94
CHD2-213ENST00000628118 MAFGO15525 162 aa9.2□□□□□ -0.94
CHD2-213ENST00000628118 ZEB2O60315 1214 aa9.2□□□□□ -0.94
CHD2-213ENST00000628118 LARGE1O95461 756 aa9.2□□□□□ -0.94
CHD2-213ENST00000628118 CTDNEP1O95476 244 aa9.2□□□□□ -0.94
CHD2-213ENST00000628118 EIF2AK2P19525 551 aaKnown RBP9.2□□□□□ -0.94
CHD2-213ENST00000628118 CST5P28325 142 aaPredicted RBP9.2□□□□□ -0.94
CHD2-213ENST00000628118 NLRP5P59047 1200 aa9.2□□□□□ -0.94
CHD2-213ENST00000628118 TNFAIP2Q03169 654 aa9.2□□□□□ -0.94
CHD2-213ENST00000628118 CCDC144BQ3MJ40 725 aa9.2□□□□□ -0.94
CHD2-213ENST00000628118 DUSP28Q4G0W2 176 aa9.2□□□□□ -0.94
CHD2-213ENST00000628118 PRAMEF19Q5SWL8 479 aa9.2□□□□□ -0.94
CHD2-213ENST00000628118 TYW1BQ6NUM6 668 aa9.2□□□□□ -0.94
CHD2-213ENST00000628118 TAPT1Q6NXT6 567 aa9.2□□□□□ -0.94
CHD2-213ENST00000628118 USP17L6PQ6QN14 398 aa9.2□□□□□ -0.94
CHD2-213ENST00000628118 NOL8Q76FK4 1167 aaKnown RBP9.2□□□□□ -0.94
CHD2-213ENST00000628118 RNF180Q86T96 592 aa9.2□□□□□ -0.94
CHD2-213ENST00000628118 REXO1Q8N1G1 1221 aaKnown RBP9.2□□□□□ -0.94
CHD2-213ENST00000628118 NECAB1Q8N987 351 aa9.2□□□□□ -0.94
CHD2-213ENST00000628118 NSUN7Q8NE18 718 aaKnown RBP9.2□□□□□ -0.94
CHD2-213ENST00000628118 CDHR1Q96JP9 859 aa9.2□□□□□ -0.94
CHD2-213ENST00000628118 PURBQ96QR8 312 aaKnown RBP9.2□□□□□ -0.94
CHD2-213ENST00000628118 TSEN34Q9BSV6 310 aaKnown RBP9.2□□□□□ -0.94
CHD2-213ENST00000628118 BRMS1Q9HCU9 246 aa9.2□□□□□ -0.94
CHD2-213ENST00000628118 PCDHA6Q9UN73 950 aa9.2□□□□□ -0.94
CHD2-213ENST00000628118 PCDHA4Q9UN74 947 aa9.2□□□□□ -0.94
CHD2-213ENST00000628118 PCDHA8Q9Y5H6 950 aa9.2□□□□□ -0.94
CHD2-213ENST00000628118 LRRC37A2A6NM11 1700 aa9.19□□□□□ -0.94
CHD2-213ENST00000628118 KIAA1217Q5T5P2 1943 aa9.19□□□□□ -0.94
CHD2-213ENST00000628118 DNM1LO00429 736 aa9.19□□□□□ -0.94
CHD2-213ENST00000628118 MYCP01106 439 aaPredicted RBP9.19□□□□□ -0.94
CHD2-213ENST00000628118 ICAM3P32942 547 aa9.19□□□□□ -0.94
CHD2-213ENST00000628118 SREBF1P36956 1147 aa9.19□□□□□ -0.94
CHD2-213ENST00000628118 GJA9P57773 515 aa9.19□□□□□ -0.94
CHD2-213ENST00000628118 TRIM29Q14134 588 aa9.19□□□□□ -0.94
CHD2-213ENST00000628118 BRDTQ58F21 947 aaPredicted RBP9.19□□□□□ -0.94
CHD2-213ENST00000628118 IFFO2Q5TF58 517 aa9.19□□□□□ -0.94
CHD2-213ENST00000628118 NLRX1Q86UT6 975 aa9.19□□□□□ -0.94
CHD2-213ENST00000628118 CCDC83Q8IWF9 413 aa9.19□□□□□ -0.94
CHD2-213ENST00000628118 FBXO16Q8IX29 292 aaPredicted RBP9.19□□□□□ -0.94
CHD2-213ENST00000628118 FAM184AQ8NB25 1140 aa9.19□□□□□ -0.94
CHD2-213ENST00000628118 PCSK9Q8NBP7 692 aaKnown RBP9.19□□□□□ -0.94
CHD2-213ENST00000628118 SNX21Q969T3 373 aa9.19□□□□□ -0.94
CHD2-213ENST00000628118 TMX3Q96JJ7 454 aa9.19□□□□□ -0.94
CHD2-213ENST00000628118 ALG1Q9BT22 464 aa9.19□□□□□ -0.94
CHD2-213ENST00000628118 ANO3Q9BYT9 981 aa9.19□□□□□ -0.94
CHD2-213ENST00000628118 WDR11Q9BZH6 1224 aa9.19□□□□□ -0.94
CHD2-213ENST00000628118 AP5M1Q9H0R1 490 aa9.19□□□□□ -0.94
CHD2-213ENST00000628118 UPF3AQ9H1J1 476 aaKnown RBP9.19□□□□□ -0.94
CHD2-213ENST00000628118 XPNPEP3Q9NQH7 507 aa9.19□□□□□ -0.94
CHD2-213ENST00000628118 VPS54Q9P1Q0 977 aa9.19□□□□□ -0.94
CHD2-213ENST00000628118 GNEQ9Y223 722 aaKnown RBP9.19□□□□□ -0.94
CHD2-213ENST00000628118 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.19□□□□□ -0.94
CHD2-213ENST00000628118 FRMPD3Q5JV73 1810 aa9.19□□□□□ -0.94
CHD2-213ENST00000628118 MOXD2PA6NHM9 499 aa9.18□□□□□ -0.94
CHD2-213ENST00000628118 KBTBD13C9JR72 458 aa9.18□□□□□ -0.94
CHD2-213ENST00000628118 FIBPO43427 364 aa9.18□□□□□ -0.94
CHD2-213ENST00000628118 KPNA6O60684 536 aa9.18□□□□□ -0.94
CHD2-213ENST00000628118 FARP2O94887 1054 aaPredicted RBP9.18□□□□□ -0.94
CHD2-213ENST00000628118 CYP3A4P08684 503 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms