RNA–Protein interactions for RNA: ENST00000620536.4

ATXN3-252, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-252ENST00000620536 NOD1Q9Y239 953 aa27.83■■■□□ 2.05
ATXN3-252ENST00000620536 FOSL2P15408 326 aa27.82■■■□□ 2.04
ATXN3-252ENST00000620536 PBX4Q9BYU1 374 aa27.82■■■□□ 2.04
ATXN3-252ENST00000620536 ZNF576Q9H609 170 aa27.82■■■□□ 2.04
ATXN3-252ENST00000620536 CYTH3O43739 400 aa27.81■■■□□ 2.04
ATXN3-252ENST00000620536 DGKDQ16760 1214 aa27.81■■■□□ 2.04
ATXN3-252ENST00000620536 RETREG2Q8NC44 543 aa27.81■■■□□ 2.04
ATXN3-252ENST00000620536 MAFAQ8NHW3 353 aaPredicted RBP27.81■■■□□ 2.04
ATXN3-252ENST00000620536 CXXC1Q9P0U4 656 aaPredicted RBP27.81■■■□□ 2.04
ATXN3-252ENST00000620536 MSRAQ9UJ68 235 aa27.81■■■□□ 2.04
ATXN3-252ENST00000620536 PFKMP08237 780 aa27.8■■■□□ 2.04
ATXN3-252ENST00000620536 KIF5BP33176 963 aa27.8■■■□□ 2.04
ATXN3-252ENST00000620536 PBX2P40425 430 aa27.8■■■□□ 2.04
ATXN3-252ENST00000620536 LAMC2Q13753 1193 aa27.8■■■□□ 2.04
ATXN3-252ENST00000620536 GRIN2CQ14957 1233 aa27.8■■■□□ 2.04
ATXN3-252ENST00000620536 KCNV1Q6PIU1 500 aa27.8■■■□□ 2.04
ATXN3-252ENST00000620536 DHX37Q8IY37 1157 aaKnown RBP27.8■■■□□ 2.04
ATXN3-252ENST00000620536 CTCFLQ8NI51 663 aaPredicted RBP27.8■■■□□ 2.04
ATXN3-252ENST00000620536 EMID1Q96A84 441 aaPredicted RBP27.8■■■□□ 2.04
ATXN3-252ENST00000620536 MAP3K14Q99558 947 aa27.8■■■□□ 2.04
ATXN3-252ENST00000620536 ESYT1Q9BSJ8 1104 aa27.8■■■□□ 2.04
ATXN3-252ENST00000620536 MTA3Q9BTC8 594 aa27.8■■■□□ 2.04
ATXN3-252ENST00000620536 LSG1Q9H089 658 aaKnown RBP27.8■■■□□ 2.04
ATXN3-252ENST00000620536 LY9Q9HBG7 655 aa27.8■■■□□ 2.04
ATXN3-252ENST00000620536 PRC1O43663 620 aa27.79■■■□□ 2.04
ATXN3-252ENST00000620536 DDAH1O94760 285 aa27.79■■■□□ 2.04
ATXN3-252ENST00000620536 MCM5P33992 734 aa27.79■■■□□ 2.04
ATXN3-252ENST00000620536 PGM5Q15124 567 aa27.79■■■□□ 2.04
ATXN3-252ENST00000620536 RAB30Q15771 203 aa27.79■■■□□ 2.04
ATXN3-252ENST00000620536 NFXL1Q6ZNB6 911 aa27.79■■■□□ 2.04
ATXN3-252ENST00000620536 VSIG10LQ86VR7 867 aa27.79■■■□□ 2.04
ATXN3-252ENST00000620536 FCHSD1Q86WN1 690 aa27.79■■■□□ 2.04
ATXN3-252ENST00000620536 ZNF654Q8IZM8 581 aa27.79■■■□□ 2.04
ATXN3-252ENST00000620536 TMTC2Q8N394 836 aa27.79■■■□□ 2.04
ATXN3-252ENST00000620536 PIBF1Q8WXW3 757 aa27.79■■■□□ 2.04
ATXN3-252ENST00000620536 CCND2P30279 289 aa27.78■■■□□ 2.04
ATXN3-252ENST00000620536 BFSP2Q13515 415 aa27.78■■■□□ 2.04
ATXN3-252ENST00000620536 PTGISQ16647 500 aa27.78■■■□□ 2.04
ATXN3-252ENST00000620536 DEFB128Q7Z7B8 93 aa27.78■■■□□ 2.04
ATXN3-252ENST00000620536 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.78■■■□□ 2.04
ATXN3-252ENST00000620536 MYL10Q9BUA6 226 aa27.78■■■□□ 2.04
ATXN3-252ENST00000620536 SLC4A7Q9Y6M7 1214 aa27.78■■■□□ 2.04
ATXN3-252ENST00000620536 SCN10AQ9Y5Y9 1956 aa27.77■■■□□ 2.04
ATXN3-252ENST00000620536 CCDC69A6NI79 296 aa27.77■■■□□ 2.04
ATXN3-252ENST00000620536 ZBBXA8MT70 800 aa27.77■■■□□ 2.04
ATXN3-252ENST00000620536 PITPNM1O00562 1244 aa27.77■■■□□ 2.04
ATXN3-252ENST00000620536 SLC27A2O14975 620 aa27.77■■■□□ 2.04
ATXN3-252ENST00000620536 RFC2P35250 354 aa27.77■■■□□ 2.04
ATXN3-252ENST00000620536 CCDC155Q8N6L0 562 aa27.77■■■□□ 2.04
ATXN3-252ENST00000620536 PPTC7Q8NI37 304 aa27.77■■■□□ 2.04
ATXN3-252ENST00000620536 RRP36Q96EU6 259 aaKnown RBP27.77■■■□□ 2.04
ATXN3-252ENST00000620536 TMEM87BQ96K49 555 aa27.77■■■□□ 2.04
ATXN3-252ENST00000620536 ANO2Q9NQ90 1003 aa27.77■■■□□ 2.04
ATXN3-252ENST00000620536 CENPQQ7L2Z9 268 aaPredicted RBP27.76■■■□□ 2.03
ATXN3-252ENST00000620536 SESTD1Q86VW0 696 aa27.76■■■□□ 2.03
ATXN3-252ENST00000620536 KAT2BQ92831 832 aa27.76■■■□□ 2.03
ATXN3-252ENST00000620536 LZTS2Q9BRK4 669 aa27.76■■■□□ 2.03
ATXN3-252ENST00000620536 KATNAL1Q9BW62 490 aa27.76■■■□□ 2.03
ATXN3-252ENST00000620536 SPZ1Q9BXG8 430 aa27.76■■■□□ 2.03
ATXN3-252ENST00000620536 KIAA1217Q5T5P2 1943 aa27.76■■■□□ 2.03
ATXN3-252ENST00000620536 RGS20O76081 388 aa27.75■■■□□ 2.03
ATXN3-252ENST00000620536 ACTN1P12814 892 aa27.75■■■□□ 2.03
ATXN3-252ENST00000620536 SMARCA1P28370 1054 aa27.75■■■□□ 2.03
ATXN3-252ENST00000620536 GNAQP50148 359 aa27.75■■■□□ 2.03
ATXN3-252ENST00000620536 CREB3L3Q68CJ9 461 aa27.75■■■□□ 2.03
ATXN3-252ENST00000620536 C7orf31Q8N865 590 aa27.75■■■□□ 2.03
ATXN3-252ENST00000620536 IL31RAQ8NI17 732 aa27.75■■■□□ 2.03
ATXN3-252ENST00000620536 SEC63Q9UGP8 760 aaKnown RBP27.75■■■□□ 2.03
ATXN3-252ENST00000620536 SH2B2O14492 632 aaPredicted RBP27.74■■■□□ 2.03
ATXN3-252ENST00000620536 IQCF3P0C7M6 154 aa27.74■■■□□ 2.03
ATXN3-252ENST00000620536 TGFB3P10600 412 aa27.74■■■□□ 2.03
ATXN3-252ENST00000620536 NECTIN1Q15223 517 aa27.74■■■□□ 2.03
ATXN3-252ENST00000620536 BMP2KLQ5H9B9 411 aa27.74■■■□□ 2.03
ATXN3-252ENST00000620536 CELF3Q5SZQ8 465 aaKnown RBP27.74■■■□□ 2.03
ATXN3-252ENST00000620536 GDF6Q6KF10 455 aaPredicted RBP27.74■■■□□ 2.03
ATXN3-252ENST00000620536 SPATA33Q96N06 139 aa27.74■■■□□ 2.03
ATXN3-252ENST00000620536 ALG1Q9BT22 464 aa27.74■■■□□ 2.03
ATXN3-252ENST00000620536 SORBS3O60504 671 aa27.73■■■□□ 2.03
ATXN3-252ENST00000620536 GGPS1O95749 300 aa27.73■■■□□ 2.03
ATXN3-252ENST00000620536 CALM1P0DP23 149 aa27.73■■■□□ 2.03
ATXN3-252ENST00000620536 CALM2P0DP24 149 aa27.73■■■□□ 2.03
ATXN3-252ENST00000620536 CALM3P0DP25 149 aa27.73■■■□□ 2.03
ATXN3-252ENST00000620536 PSEN2P49810 448 aa27.73■■■□□ 2.03
ATXN3-252ENST00000620536 MYSM1Q5VVJ2 828 aa27.73■■■□□ 2.03
ATXN3-252ENST00000620536 CUL5Q93034 780 aa27.73■■■□□ 2.03
ATXN3-252ENST00000620536 VWCEQ96DN2 955 aa27.73■■■□□ 2.03
ATXN3-252ENST00000620536 ZFP91Q96JP5 570 aaPredicted RBP27.73■■■□□ 2.03
ATXN3-252ENST00000620536 FTOQ9C0B1 505 aaKnown RBP eCLIP27.73■■■□□ 2.03
ATXN3-252ENST00000620536 SLC28A3Q9HAS3 691 aa27.73■■■□□ 2.03
ATXN3-252ENST00000620536 PPFIA4O75335 1185 aa27.72■■■□□ 2.03
ATXN3-252ENST00000620536 ZNF286BP0CG31 522 aa27.72■■■□□ 2.03
ATXN3-252ENST00000620536 MFSD10Q14728 455 aa27.72■■■□□ 2.03
ATXN3-252ENST00000620536 GNPTABQ3T906 1256 aa27.72■■■□□ 2.03
ATXN3-252ENST00000620536 SMARCC2Q8TAQ2 1214 aa27.72■■■□□ 2.03
ATXN3-252ENST00000620536 CAGE1Q8TC20 777 aa27.72■■■□□ 2.03
ATXN3-252ENST00000620536 GAS2L1Q99501 681 aaPredicted RBP27.72■■■□□ 2.03
ATXN3-252ENST00000620536 NKX2-4Q9H2Z4 354 aa27.72■■■□□ 2.03
ATXN3-252ENST00000620536 MLXIPQ9HAP2 919 aa27.72■■■□□ 2.03
ATXN3-252ENST00000620536 STAM2O75886 525 aa27.71■■■□□ 2.03
ATXN3-252ENST00000620536 F2P00734 622 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms