RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 TMEM265A0A087WTH1 108 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 OPLAHO14841 1288 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 PRC1O43663 620 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 PPFIA4O75335 1185 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 TGFB3P10600 412 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 ATP2A2P16615 1042 aaKnown RBP7.42□□□□□ -1.22
TCF4-228ENST00000565393 CCND2P30279 289 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 KIF5BP33176 963 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 MCM5P33992 734 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 GNAQP50148 359 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 RABGGTBP53611 331 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 ARHGAP1Q07960 439 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 TROAPQ12815 778 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 BFSP2Q13515 415 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 PGM5Q15124 567 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 RAB30Q15771 203 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 RASIP1Q5U651 963 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 SYNE3Q6ZMZ3 975 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 STOX1Q6ZVD7 989 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 CCDC82Q8N4S0 544 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 CCDC155Q8N6L0 562 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 SMARCC2Q8TAQ2 1214 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 CUL5Q93034 780 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 MTMR8Q96EF0 704 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 SPATA33Q96N06 139 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 GAS2L1Q99501 681 aaPredicted RBP7.42□□□□□ -1.22
TCF4-228ENST00000565393 LZTS2Q9BRK4 669 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 PDCD2LQ9BRP1 358 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 MYL10Q9BUA6 226 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 WNT8AQ9H1J5 351 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 NKX2-4Q9H2Z4 354 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 PRDM12Q9H4Q4 367 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 ANO2Q9NQ90 1003 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 SEC63Q9UGP8 760 aaKnown RBP7.42□□□□□ -1.22
TCF4-228ENST00000565393 MYH8P13535 1937 aa7.42□□□□□ -1.22
TCF4-228ENST00000565393 COL11A1P12107 1806 aaPredicted RBP7.41□□□□□ -1.22
TCF4-228ENST00000565393 ALPK3Q96L96 1907 aa7.41□□□□□ -1.22
TCF4-228ENST00000565393 KIF28PB7ZC32 967 aa7.41□□□□□ -1.22
TCF4-228ENST00000565393 SLC27A2O14975 620 aa7.41□□□□□ -1.22
TCF4-228ENST00000565393 CYTH3O43739 400 aa7.41□□□□□ -1.22
TCF4-228ENST00000565393 GGPS1O95749 300 aa7.41□□□□□ -1.22
TCF4-228ENST00000565393 PFKMP08237 780 aa7.41□□□□□ -1.22
TCF4-228ENST00000565393 RFC2P35250 354 aa7.41□□□□□ -1.22
TCF4-228ENST00000565393 PSEN2P49810 448 aa7.41□□□□□ -1.22
TCF4-228ENST00000565393 ANTXR2P58335 489 aa7.41□□□□□ -1.22
TCF4-228ENST00000565393 SP2Q02086 613 aa7.41□□□□□ -1.22
TCF4-228ENST00000565393 MFSD10Q14728 455 aa7.41□□□□□ -1.22
TCF4-228ENST00000565393 CCDC85BQ15834 202 aaPredicted RBP7.41□□□□□ -1.22
TCF4-228ENST00000565393 KIAA0753Q2KHM9 967 aa7.41□□□□□ -1.22
TCF4-228ENST00000565393 CELF3Q5SZQ8 465 aaKnown RBP7.41□□□□□ -1.22
TCF4-228ENST00000565393 MYSM1Q5VVJ2 828 aa7.41□□□□□ -1.22
TCF4-228ENST00000565393 GDF6Q6KF10 455 aaPredicted RBP7.41□□□□□ -1.22
TCF4-228ENST00000565393 ZNF654Q8IZM8 581 aa7.41□□□□□ -1.22
TCF4-228ENST00000565393 CMTR1Q8N1G2 835 aaKnown RBP7.41□□□□□ -1.22
TCF4-228ENST00000565393 PPTC7Q8NI37 304 aa7.41□□□□□ -1.22
TCF4-228ENST00000565393 TMEM87BQ96K49 555 aa7.41□□□□□ -1.22
TCF4-228ENST00000565393 ESYT1Q9BSJ8 1104 aa7.41□□□□□ -1.22
TCF4-228ENST00000565393 KATNAL1Q9BW62 490 aa7.41□□□□□ -1.22
TCF4-228ENST00000565393 LSG1Q9H089 658 aaKnown RBP7.41□□□□□ -1.22
TCF4-228ENST00000565393 HDAC6Q9UBN7 1215 aa7.41□□□□□ -1.22
TCF4-228ENST00000565393 SLC12A7Q9Y666 1083 aa7.41□□□□□ -1.22
TCF4-228ENST00000565393 PITPNM1O00562 1244 aa7.4□□□□□ -1.22
TCF4-228ENST00000565393 RGS20O76081 388 aa7.4□□□□□ -1.22
TCF4-228ENST00000565393 DDAH1O94760 285 aa7.4□□□□□ -1.22
TCF4-228ENST00000565393 ZNF286BP0CG31 522 aa7.4□□□□□ -1.22
TCF4-228ENST00000565393 CALM1P0DP23 149 aa7.4□□□□□ -1.22
TCF4-228ENST00000565393 CALM2P0DP24 149 aa7.4□□□□□ -1.22
TCF4-228ENST00000565393 CALM3P0DP25 149 aa7.4□□□□□ -1.22
TCF4-228ENST00000565393 MYOGP15173 224 aa7.4□□□□□ -1.22
TCF4-228ENST00000565393 RXRAP19793 462 aa7.4□□□□□ -1.22
TCF4-228ENST00000565393 SMARCA1P28370 1054 aa7.4□□□□□ -1.22
TCF4-228ENST00000565393 ZNF200P98182 395 aaPredicted RBP7.4□□□□□ -1.22
TCF4-228ENST00000565393 NECTIN1Q15223 517 aa7.4□□□□□ -1.22
TCF4-228ENST00000565393 SLC35G1Q2M3R5 365 aa7.4□□□□□ -1.22
TCF4-228ENST00000565393 HSDL1Q3SXM5 330 aa7.4□□□□□ -1.22
TCF4-228ENST00000565393 GNPTABQ3T906 1256 aa7.4□□□□□ -1.22
TCF4-228ENST00000565393 RNF20Q5VTR2 975 aa7.4□□□□□ -1.22
TCF4-228ENST00000565393 CREB3L3Q68CJ9 461 aa7.4□□□□□ -1.22
TCF4-228ENST00000565393 USP17L6PQ6QN14 398 aa7.4□□□□□ -1.22
TCF4-228ENST00000565393 RAB11FIP4Q86YS3 637 aa7.4□□□□□ -1.22
TCF4-228ENST00000565393 MB21D2Q8IYB1 491 aaPredicted RBP7.4□□□□□ -1.22
TCF4-228ENST00000565393 SRBD1Q8N5C6 995 aaKnown RBP7.4□□□□□ -1.22
TCF4-228ENST00000565393 KAT2BQ92831 832 aa7.4□□□□□ -1.22
TCF4-228ENST00000565393 EMID1Q96A84 441 aaPredicted RBP7.4□□□□□ -1.22
TCF4-228ENST00000565393 MAP3K14Q99558 947 aa7.4□□□□□ -1.22
TCF4-228ENST00000565393 MTA3Q9BTC8 594 aa7.4□□□□□ -1.22
TCF4-228ENST00000565393 ZBED2Q9BTP6 218 aa7.4□□□□□ -1.22
TCF4-228ENST00000565393 PSTPIP2Q9H939 334 aa7.4□□□□□ -1.22
TCF4-228ENST00000565393 LY9Q9HBG7 655 aa7.4□□□□□ -1.22
TCF4-228ENST00000565393 YBX2Q9Y2T7 364 aaKnown RBP7.4□□□□□ -1.22
TCF4-228ENST00000565393 PCDHA11Q9Y5I1 949 aa7.4□□□□□ -1.22
TCF4-228ENST00000565393 CENPFP49454 3210 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 ZNFX1Q9P2E3 1918 aaKnown RBP7.39□□□□□ -1.23
TCF4-228ENST00000565393 MYH4Q9Y623 1939 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 PARP14Q460N5 1801 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 hCG_1642624A0A1W2PR95 340 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 SPATA31C2B4DYI2 1134 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 H3BRB1 525 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 NOP56O00567 594 aaKnown RBP7.39□□□□□ -1.23
TCF4-228ENST00000565393 SH2B2O14492 632 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms