RNA–Protein interactions for RNA: ENST00000563662.2

VAC14-204, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 3

Gene VAC14, Length 554 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-204ENST00000563662 LAMC2Q13753 1193 aa11.64□□□□□ -0.55
VAC14-204ENST00000563662 FAM126BQ8IXS8 530 aa11.64□□□□□ -0.55
VAC14-204ENST00000563662 RPUSD2Q8IZ73 545 aaKnown RBP11.64□□□□□ -0.55
VAC14-204ENST00000563662 ZNF654Q8IZM8 581 aa11.64□□□□□ -0.55
VAC14-204ENST00000563662 TBC1D5Q92609 795 aa11.64□□□□□ -0.55
VAC14-204ENST00000563662 CUL5Q93034 780 aa11.64□□□□□ -0.55
VAC14-204ENST00000563662 PIGSQ96S52 555 aa11.64□□□□□ -0.55
VAC14-204ENST00000563662 SPZ1Q9BXG8 430 aa11.64□□□□□ -0.55
VAC14-204ENST00000563662 MTIF3Q9H2K0 278 aaKnown RBP11.64□□□□□ -0.55
VAC14-204ENST00000563662 LY9Q9HBG7 655 aa11.64□□□□□ -0.55
VAC14-204ENST00000563662 PXMP2Q9NR77 195 aa11.64□□□□□ -0.55
VAC14-204ENST00000563662 TSHZ2Q9NRE2 1034 aa11.64□□□□□ -0.55
VAC14-204ENST00000563662 TBX21Q9UL17 535 aa11.64□□□□□ -0.55
VAC14-204ENST00000563662 PPP1R37O75864 691 aa11.63□□□□□ -0.55
VAC14-204ENST00000563662 CD4P01730 458 aa11.63□□□□□ -0.55
VAC14-204ENST00000563662 SMAD3P84022 425 aaKnown RBP11.63□□□□□ -0.55
VAC14-204ENST00000563662 SHHQ15465 462 aa11.63□□□□□ -0.55
VAC14-204ENST00000563662 TSGA10IPQ3SY00 556 aa11.63□□□□□ -0.55
VAC14-204ENST00000563662 XRRA1Q6P2D8 792 aa11.63□□□□□ -0.55
VAC14-204ENST00000563662 NFRKBQ6P4R8 1299 aa11.63□□□□□ -0.55
VAC14-204ENST00000563662 SEPT14Q6ZU15 432 aa11.63□□□□□ -0.55
VAC14-204ENST00000563662 VSIG10LQ86VR7 867 aa11.63□□□□□ -0.55
VAC14-204ENST00000563662 TEX2Q8IWB9 1127 aa11.63□□□□□ -0.55
VAC14-204ENST00000563662 DEFB123Q8N688 67 aa11.63□□□□□ -0.55
VAC14-204ENST00000563662 LRCH3Q96II8 777 aa11.63□□□□□ -0.55
VAC14-204ENST00000563662 NEK1Q96PY6 1258 aa11.63□□□□□ -0.55
VAC14-204ENST00000563662 SOX1O00570 391 aaPredicted RBP11.62□□□□□ -0.55
VAC14-204ENST00000563662 SH2B2O14492 632 aaPredicted RBP11.62□□□□□ -0.55
VAC14-204ENST00000563662 EIF2AK2P19525 551 aaKnown RBP11.62□□□□□ -0.55
VAC14-204ENST00000563662 CCND2P30279 289 aa11.62□□□□□ -0.55
VAC14-204ENST00000563662 ANTXR2P58335 489 aa11.62□□□□□ -0.55
VAC14-204ENST00000563662 IRX5P78411 483 aaPredicted RBP11.62□□□□□ -0.55
VAC14-204ENST00000563662 PURAQ00577 322 aaKnown RBP11.62□□□□□ -0.55
VAC14-204ENST00000563662 DGKDQ16760 1214 aa11.62□□□□□ -0.55
VAC14-204ENST00000563662 GNPTABQ3T906 1256 aa11.62□□□□□ -0.55
VAC14-204ENST00000563662 CCDC62Q6P9F0 684 aa11.62□□□□□ -0.55
VAC14-204ENST00000563662 PSRC1Q6PGN9 363 aaPredicted RBP11.62□□□□□ -0.55
VAC14-204ENST00000563662 DHX32Q7L7V1 743 aaKnown RBP11.62□□□□□ -0.55
VAC14-204ENST00000563662 SGMS1Q86VZ5 419 aa11.62□□□□□ -0.55
VAC14-204ENST00000563662 DHX37Q8IY37 1157 aaKnown RBP11.62□□□□□ -0.55
VAC14-204ENST00000563662 EMID1Q96A84 441 aaPredicted RBP11.62□□□□□ -0.55
VAC14-204ENST00000563662 RNPC3Q96LT9 517 aaKnown RBP11.62□□□□□ -0.55
VAC14-204ENST00000563662 PDCD2LQ9BRP1 358 aa11.62□□□□□ -0.55
VAC14-204ENST00000563662 HIPK3Q9H422 1215 aa11.62□□□□□ -0.55
VAC14-204ENST00000563662 RBM28Q9NW13 759 aaKnown RBP11.62□□□□□ -0.55
VAC14-204ENST00000563662 MRVI1Q9Y6F6 885 aa11.62□□□□□ -0.55
VAC14-204ENST00000563662 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.61□□□□□ -0.55
VAC14-204ENST00000563662 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.61□□□□□ -0.55
VAC14-204ENST00000563662 CYTH3O43739 400 aa11.61□□□□□ -0.55
VAC14-204ENST00000563662 PPFIA4O75335 1185 aa11.61□□□□□ -0.55
VAC14-204ENST00000563662 REC8O95072 547 aa11.61□□□□□ -0.55
VAC14-204ENST00000563662 MYCLP12524 364 aaPredicted RBP11.61□□□□□ -0.55
VAC14-204ENST00000563662 ERICH6BQ5W0A0 696 aa11.61□□□□□ -0.55
VAC14-204ENST00000563662 FANCBQ8NB91 859 aa11.61□□□□□ -0.55
VAC14-204ENST00000563662 RETREG2Q8NC44 543 aa11.61□□□□□ -0.55
VAC14-204ENST00000563662 SMARCC2Q8TAQ2 1214 aa11.61□□□□□ -0.55
VAC14-204ENST00000563662 KATNAL1Q9BW62 490 aa11.61□□□□□ -0.55
VAC14-204ENST00000563662 ALDH8A1Q9H2A2 487 aaPredicted RBP11.61□□□□□ -0.55
VAC14-204ENST00000563662 COL20A1Q9P218 1284 aa11.61□□□□□ -0.55
VAC14-204ENST00000563662 DDX41Q9UJV9 622 aaKnown RBP11.61□□□□□ -0.55
VAC14-204ENST00000563662 NOD1Q9Y239 953 aa11.61□□□□□ -0.55
VAC14-204ENST00000563662 TAF6LQ9Y6J9 622 aa11.61□□□□□ -0.55
VAC14-204ENST00000563662 DDX49Q9Y6V7 483 aaKnown RBP11.61□□□□□ -0.55
VAC14-204ENST00000563662 TRIOBPQ9H2D6 2365 aa11.61□□□□□ -0.55
VAC14-204ENST00000563662 MYH4Q9Y623 1939 aa11.6□□□□□ -0.55
VAC14-204ENST00000563662 CCDC196A0A1B0GTZ2 297 aa11.6□□□□□ -0.55
VAC14-204ENST00000563662 PIK3CDO00329 1044 aa11.6□□□□□ -0.55
VAC14-204ENST00000563662 EPB41L2O43491 1005 aaKnown RBP11.6□□□□□ -0.55
VAC14-204ENST00000563662 PPP1R11O60927 126 aaPredicted RBP11.6□□□□□ -0.55
VAC14-204ENST00000563662 FGBP02675 491 aa11.6□□□□□ -0.55
VAC14-204ENST00000563662 PFKMP08237 780 aa11.6□□□□□ -0.55
VAC14-204ENST00000563662 ITGB8P26012 769 aa11.6□□□□□ -0.55
VAC14-204ENST00000563662 FGD1P98174 961 aa11.6□□□□□ -0.55
VAC14-204ENST00000563662 PGM5Q15124 567 aa11.6□□□□□ -0.55
VAC14-204ENST00000563662 LY6KQ17RY6 165 aa11.6□□□□□ -0.55
VAC14-204ENST00000563662 NBPF20Q3BBV1 942 aa11.6□□□□□ -0.55
VAC14-204ENST00000563662 FAM47CQ5HY64 1035 aa11.6□□□□□ -0.55
VAC14-204ENST00000563662 C9orf50Q5SZB4 431 aa11.6□□□□□ -0.55
VAC14-204ENST00000563662 TMEM63BQ5T3F8 832 aa11.6□□□□□ -0.55
VAC14-204ENST00000563662 IER5LQ5T953 404 aa11.6□□□□□ -0.55
VAC14-204ENST00000563662 ZNF697Q5TEC3 545 aa11.6□□□□□ -0.55
VAC14-204ENST00000563662 FCHSD1Q86WN1 690 aa11.6□□□□□ -0.55
VAC14-204ENST00000563662 CCDC155Q8N6L0 562 aa11.6□□□□□ -0.55
VAC14-204ENST00000563662 PPTC7Q8NI37 304 aa11.6□□□□□ -0.55
VAC14-204ENST00000563662 AFG1LQ8WV93 481 aa11.6□□□□□ -0.55
VAC14-204ENST00000563662 PSTPIP2Q9H939 334 aa11.6□□□□□ -0.55
VAC14-204ENST00000563662 SENP2Q9HC62 589 aa11.6□□□□□ -0.55
VAC14-204ENST00000563662 IL23AQ9NPF7 189 aa11.6□□□□□ -0.55
VAC14-204ENST00000563662 GRIN2DO15399 1336 aa11.6□□□□□ -0.55
VAC14-204ENST00000563662 PARP14Q460N5 1801 aa11.59□□□□□ -0.55
VAC14-204ENST00000563662 TMEM265A0A087WTH1 108 aa11.59□□□□□ -0.55
VAC14-204ENST00000563662 OPLAHO14841 1288 aa11.59□□□□□ -0.55
VAC14-204ENST00000563662 PARNO95453 639 aaKnown RBP11.59□□□□□ -0.55
VAC14-204ENST00000563662 PSMA5P28066 241 aa11.59□□□□□ -0.55
VAC14-204ENST00000563662 HOXA13P31271 388 aaPredicted RBP11.59□□□□□ -0.55
VAC14-204ENST00000563662 RFC2P35250 354 aa11.59□□□□□ -0.55
VAC14-204ENST00000563662 RCAN1P53805 252 aa11.59□□□□□ -0.55
VAC14-204ENST00000563662 PSMC6P62333 389 aa11.59□□□□□ -0.55
VAC14-204ENST00000563662 EXOSC10Q01780 885 aaKnown RBP11.59□□□□□ -0.55
VAC14-204ENST00000563662 BFSP2Q13515 415 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms