RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 RRP36Q96EU6 259 aaKnown RBP23.42■■□□□ 1.34
DDB1-220ENST00000542337 PDCD2LQ9BRP1 358 aa23.42■■□□□ 1.34
DDB1-220ENST00000542337 TRMT13Q9NUP7 481 aaKnown RBP23.42■■□□□ 1.34
DDB1-220ENST00000542337 SEC63Q9UGP8 760 aaKnown RBP23.42■■□□□ 1.34
DDB1-220ENST00000542337 DDX41Q9UJV9 622 aaKnown RBP23.42■■□□□ 1.34
DDB1-220ENST00000542337 NOD1Q9Y239 953 aa23.42■■□□□ 1.34
DDB1-220ENST00000542337 CYTH3O43739 400 aa23.41■■□□□ 1.34
DDB1-220ENST00000542337 CALM1P0DP23 149 aa23.41■■□□□ 1.34
DDB1-220ENST00000542337 CALM2P0DP24 149 aa23.41■■□□□ 1.34
DDB1-220ENST00000542337 CALM3P0DP25 149 aa23.41■■□□□ 1.34
DDB1-220ENST00000542337 SMARCA1P28370 1054 aa23.41■■□□□ 1.34
DDB1-220ENST00000542337 ARHGAP1Q07960 439 aa23.41■■□□□ 1.34
DDB1-220ENST00000542337 DGKDQ16760 1214 aa23.41■■□□□ 1.34
DDB1-220ENST00000542337 FCHSD1Q86WN1 690 aa23.41■■□□□ 1.34
DDB1-220ENST00000542337 PIBF1Q8WXW3 757 aa23.41■■□□□ 1.34
DDB1-220ENST00000542337 GUCD1Q96NT3 240 aa23.41■■□□□ 1.34
DDB1-220ENST00000542337 LAMA2P24043 3122 aaKnown RBP23.4■■□□□ 1.34
DDB1-220ENST00000542337 MMP3P08254 477 aa23.4■■□□□ 1.34
DDB1-220ENST00000542337 CCND2P30279 289 aa23.4■■□□□ 1.34
DDB1-220ENST00000542337 NECTIN1Q15223 517 aa23.4■■□□□ 1.34
DDB1-220ENST00000542337 SLC35G1Q2M3R5 365 aa23.4■■□□□ 1.34
DDB1-220ENST00000542337 VSIG10LQ86VR7 867 aa23.4■■□□□ 1.34
DDB1-220ENST00000542337 DHX37Q8IY37 1157 aaKnown RBP23.4■■□□□ 1.34
DDB1-220ENST00000542337 RETREG2Q8NC44 543 aa23.4■■□□□ 1.34
DDB1-220ENST00000542337 SPZ1Q9BXG8 430 aa23.4■■□□□ 1.34
DDB1-220ENST00000542337 CYP2C9P11712 490 aa23.39■■□□□ 1.33
DDB1-220ENST00000542337 LIFRP42702 1097 aa23.39■■□□□ 1.33
DDB1-220ENST00000542337 PGM5Q15124 567 aa23.39■■□□□ 1.33
DDB1-220ENST00000542337 SYNE3Q6ZMZ3 975 aa23.39■■□□□ 1.33
DDB1-220ENST00000542337 HERVK_113Q902F9 699 aa23.39■■□□□ 1.33
DDB1-220ENST00000542337 CUL5Q93034 780 aa23.39■■□□□ 1.33
DDB1-220ENST00000542337 EMID1Q96A84 441 aaPredicted RBP23.39■■□□□ 1.33
DDB1-220ENST00000542337 MYL10Q9BUA6 226 aa23.39■■□□□ 1.33
DDB1-220ENST00000542337 SLC12A7Q9Y666 1083 aa23.39■■□□□ 1.33
DDB1-220ENST00000542337 UMODL1Q5DID0 1318 aa23.38■■□□□ 1.33
DDB1-220ENST00000542337 SH2B2O14492 632 aaPredicted RBP23.38■■□□□ 1.33
DDB1-220ENST00000542337 TGFB3P10600 412 aa23.38■■□□□ 1.33
DDB1-220ENST00000542337 CDX2Q99626 313 aaPredicted RBP23.38■■□□□ 1.33
DDB1-220ENST00000542337 KATNAL1Q9BW62 490 aa23.38■■□□□ 1.33
DDB1-220ENST00000542337 PFKMP08237 780 aa23.37■■□□□ 1.33
DDB1-220ENST00000542337 DNAJB2P25686 324 aa23.37■■□□□ 1.33
DDB1-220ENST00000542337 BFSP2Q13515 415 aa23.37■■□□□ 1.33
DDB1-220ENST00000542337 PPTC7Q8NI37 304 aa23.37■■□□□ 1.33
DDB1-220ENST00000542337 WNT8AQ9H1J5 351 aa23.37■■□□□ 1.33
DDB1-220ENST00000542337 MYH6P13533 1939 aa23.36■■□□□ 1.33
DDB1-220ENST00000542337 GNPTABQ3T906 1256 aa23.36■■□□□ 1.33
DDB1-220ENST00000542337 RASIP1Q5U651 963 aa23.36■■□□□ 1.33
DDB1-220ENST00000542337 OTOP2Q7RTS6 562 aa23.36■■□□□ 1.33
DDB1-220ENST00000542337 CCDC155Q8N6L0 562 aa23.36■■□□□ 1.33
DDB1-220ENST00000542337 SMARCC2Q8TAQ2 1214 aa23.36■■□□□ 1.33
DDB1-220ENST00000542337 TIFAQ96CG3 184 aa23.36■■□□□ 1.33
DDB1-220ENST00000542337 SCLYQ96I15 445 aa23.36■■□□□ 1.33
DDB1-220ENST00000542337 TTYH1Q9H313 450 aaPredicted RBP23.36■■□□□ 1.33
DDB1-220ENST00000542337 CDC45O75419 566 aa23.35■■□□□ 1.33
DDB1-220ENST00000542337 STAM2O75886 525 aa23.35■■□□□ 1.33
DDB1-220ENST00000542337 RFC2P35250 354 aa23.35■■□□□ 1.33
DDB1-220ENST00000542337 PTGISQ16647 500 aa23.35■■□□□ 1.33
DDB1-220ENST00000542337 C7orf31Q8N865 590 aa23.35■■□□□ 1.33
DDB1-220ENST00000542337 CCDC136Q96JN2 1154 aa23.35■■□□□ 1.33
DDB1-220ENST00000542337 SPATA33Q96N06 139 aa23.35■■□□□ 1.33
DDB1-220ENST00000542337 NEK1Q96PY6 1258 aa23.35■■□□□ 1.33
DDB1-220ENST00000542337 MLXIPQ9HAP2 919 aa23.35■■□□□ 1.33
DDB1-220ENST00000542337 MSRAQ9UJ68 235 aa23.35■■□□□ 1.33
DDB1-220ENST00000542337 PITPNM1O00562 1244 aa23.34■■□□□ 1.33
DDB1-220ENST00000542337 PPFIA4O75335 1185 aa23.34■■□□□ 1.33
DDB1-220ENST00000542337 RAB30Q15771 203 aa23.34■■□□□ 1.33
DDB1-220ENST00000542337 CELF3Q5SZQ8 465 aaKnown RBP23.34■■□□□ 1.33
DDB1-220ENST00000542337 SESTD1Q86VW0 696 aa23.34■■□□□ 1.33
DDB1-220ENST00000542337 SKAP1Q86WV1 359 aa23.34■■□□□ 1.33
DDB1-220ENST00000542337 PPP1R13LQ8WUF5 828 aa23.34■■□□□ 1.33
DDB1-220ENST00000542337 SLC4A7Q9Y6M7 1214 aa23.34■■□□□ 1.33
DDB1-220ENST00000542337 ZBBXA8MT70 800 aa23.33■■□□□ 1.33
DDB1-220ENST00000542337 GGPS1O95749 300 aa23.33■■□□□ 1.33
DDB1-220ENST00000542337 ACTN1P12814 892 aa23.33■■□□□ 1.33
DDB1-220ENST00000542337 KRT32Q14532 448 aa23.33■■□□□ 1.33
DDB1-220ENST00000542337 MYSM1Q5VVJ2 828 aa23.33■■□□□ 1.33
DDB1-220ENST00000542337 SRBD1Q8N5C6 995 aaKnown RBP23.33■■□□□ 1.33
DDB1-220ENST00000542337 FANCBQ8NB91 859 aa23.33■■□□□ 1.33
DDB1-220ENST00000542337 IL31RAQ8NI17 732 aa23.33■■□□□ 1.33
DDB1-220ENST00000542337 LRRC2Q9BYS8 371 aa23.33■■□□□ 1.33
DDB1-220ENST00000542337 ZNF576Q9H609 170 aa23.33■■□□□ 1.33
DDB1-220ENST00000542337 COL6A3P12111 3177 aa23.32■■□□□ 1.32
DDB1-220ENST00000542337 GRXCR1A8MXD5 290 aa23.32■■□□□ 1.32
DDB1-220ENST00000542337 RGS20O76081 388 aa23.32■■□□□ 1.32
DDB1-220ENST00000542337 PLEKHA8P1O95397 391 aa23.32■■□□□ 1.32
DDB1-220ENST00000542337 FOSL2P15408 326 aa23.32■■□□□ 1.32
DDB1-220ENST00000542337 RXRAP19793 462 aa23.32■■□□□ 1.32
DDB1-220ENST00000542337 PSEN2P49810 448 aa23.32■■□□□ 1.32
DDB1-220ENST00000542337 DEFB128Q7Z7B8 93 aa23.32■■□□□ 1.32
DDB1-220ENST00000542337 SGMS1Q86VZ5 419 aa23.32■■□□□ 1.32
DDB1-220ENST00000542337 CAGE1Q8TC20 777 aa23.32■■□□□ 1.32
DDB1-220ENST00000542337 MYLIPQ8WY64 445 aa23.32■■□□□ 1.32
DDB1-220ENST00000542337 KAT2BQ92831 832 aa23.32■■□□□ 1.32
DDB1-220ENST00000542337 ALG1Q9BT22 464 aa23.32■■□□□ 1.32
DDB1-220ENST00000542337 PBX4Q9BYU1 374 aa23.32■■□□□ 1.32
DDB1-220ENST00000542337 CXXC1Q9P0U4 656 aaPredicted RBP23.32■■□□□ 1.32
DDB1-220ENST00000542337 PIK3CDO00329 1044 aa23.31■■□□□ 1.32
DDB1-220ENST00000542337 MFSD10Q14728 455 aa23.31■■□□□ 1.32
DDB1-220ENST00000542337 KIAA0753Q2KHM9 967 aa23.31■■□□□ 1.32
DDB1-220ENST00000542337 XRRA1Q6P2D8 792 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms