RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 ZBED2Q9BTP6 218 aa17.71■□□□□ 0.43
BRPF3-210ENST00000532538 CNNM2Q9H8M5 875 aa17.71■□□□□ 0.43
BRPF3-210ENST00000532538 MRVI1Q9Y6F6 885 aa17.71■□□□□ 0.43
BRPF3-210ENST00000532538 BAZ2BQ9UIF8 2168 aaKnown RBP17.7■□□□□ 0.42
BRPF3-210ENST00000532538 RFXAPO00287 272 aa17.7■□□□□ 0.42
BRPF3-210ENST00000532538 DGKDQ16760 1214 aa17.7■□□□□ 0.42
BRPF3-210ENST00000532538 C7orf31Q8N865 590 aa17.7■□□□□ 0.42
BRPF3-210ENST00000532538 ARNTL2Q8WYA1 636 aa17.7■□□□□ 0.42
BRPF3-210ENST00000532538 DSCC1Q9BVC3 393 aa17.7■□□□□ 0.42
BRPF3-210ENST00000532538 PTPRSQ13332 1948 aa17.7■□□□□ 0.42
BRPF3-210ENST00000532538 PRUNE2Q8WUY3 3088 aa17.69■□□□□ 0.42
BRPF3-210ENST00000532538 TLL1O43897 1013 aa17.69■□□□□ 0.42
BRPF3-210ENST00000532538 SORBS3O60504 671 aa17.69■□□□□ 0.42
BRPF3-210ENST00000532538 NUCB1Q02818 461 aa17.69■□□□□ 0.42
BRPF3-210ENST00000532538 TRDNQ13061 729 aa17.69■□□□□ 0.42
BRPF3-210ENST00000532538 GDF6Q6KF10 455 aaPredicted RBP17.69■□□□□ 0.42
BRPF3-210ENST00000532538 DHX37Q8IY37 1157 aaKnown RBP17.69■□□□□ 0.42
BRPF3-210ENST00000532538 CAGE1Q8TC20 777 aa17.69■□□□□ 0.42
BRPF3-210ENST00000532538 PHOSPHO2Q8TCD6 241 aa17.69■□□□□ 0.42
BRPF3-210ENST00000532538 UHRF1Q96T88 793 aaPredicted RBP17.69■□□□□ 0.42
BRPF3-210ENST00000532538 KATNAL1Q9BW62 490 aa17.69■□□□□ 0.42
BRPF3-210ENST00000532538 AMNQ9BXJ7 453 aa17.69■□□□□ 0.42
BRPF3-210ENST00000532538 COL20A1Q9P218 1284 aa17.69■□□□□ 0.42
BRPF3-210ENST00000532538 KAT6AQ92794 2004 aa17.69■□□□□ 0.42
BRPF3-210ENST00000532538 EIF3JO75822 258 aaKnown RBP17.68■□□□□ 0.42
BRPF3-210ENST00000532538 IGHDP01880 384 aa17.68■□□□□ 0.42
BRPF3-210ENST00000532538 NR3C2P08235 984 aa17.68■□□□□ 0.42
BRPF3-210ENST00000532538 ARHGAP1Q07960 439 aa17.68■□□□□ 0.42
BRPF3-210ENST00000532538 AAK1Q2M2I8 961 aa17.68■□□□□ 0.42
BRPF3-210ENST00000532538 CCDC62Q6P9F0 684 aa17.68■□□□□ 0.42
BRPF3-210ENST00000532538 HERC6Q8IVU3 1022 aa17.68■□□□□ 0.42
BRPF3-210ENST00000532538 AFAP1L1Q8TED9 768 aa17.68■□□□□ 0.42
BRPF3-210ENST00000532538 MAF1Q9H063 256 aa17.68■□□□□ 0.42
BRPF3-210ENST00000532538 OSBPL3Q9H4L5 887 aa17.68■□□□□ 0.42
BRPF3-210ENST00000532538 JMJD4Q9H9V9 463 aa17.68■□□□□ 0.42
BRPF3-210ENST00000532538 PRRC2BQ5JSZ5 2229 aaKnown RBP17.67■□□□□ 0.42
BRPF3-210ENST00000532538 KLRF2D3W0D1 207 aa17.67■□□□□ 0.42
BRPF3-210ENST00000532538 BAIAP3O94812 1187 aa17.67■□□□□ 0.42
BRPF3-210ENST00000532538 SELPP16109 830 aa17.67■□□□□ 0.42
BRPF3-210ENST00000532538 PSEN2P49810 448 aa17.67■□□□□ 0.42
BRPF3-210ENST00000532538 LAMC2Q13753 1193 aa17.67■□□□□ 0.42
BRPF3-210ENST00000532538 LRRC8DQ7L1W4 858 aa17.67■□□□□ 0.42
BRPF3-210ENST00000532538 HOMER1Q86YM7 354 aa17.67■□□□□ 0.42
BRPF3-210ENST00000532538 ANKS1AQ92625 1134 aa17.67■□□□□ 0.42
BRPF3-210ENST00000532538 VWCEQ96DN2 955 aa17.67■□□□□ 0.42
BRPF3-210ENST00000532538 PXMP2Q9NR77 195 aa17.67■□□□□ 0.42
BRPF3-210ENST00000532538 HDAC6Q9UBN7 1215 aa17.67■□□□□ 0.42
BRPF3-210ENST00000532538 DOCK5Q9H7D0 1870 aa17.67■□□□□ 0.42
BRPF3-210ENST00000532538 ERICH2A1L162 156 aa17.66■□□□□ 0.42
BRPF3-210ENST00000532538 ZNF286BP0CG31 522 aa17.66■□□□□ 0.42
BRPF3-210ENST00000532538 MFSD10Q14728 455 aa17.66■□□□□ 0.42
BRPF3-210ENST00000532538 STAG2Q8N3U4 1231 aa17.66■□□□□ 0.42
BRPF3-210ENST00000532538 EXOC6Q8TAG9 804 aa17.66■□□□□ 0.42
BRPF3-210ENST00000532538 DDX41Q9UJV9 622 aaKnown RBP17.66■□□□□ 0.42
BRPF3-210ENST00000532538 PCDHA1Q9Y5I3 950 aa17.66■□□□□ 0.42
BRPF3-210ENST00000532538 TFF2Q03403 129 aa17.65■□□□□ 0.42
BRPF3-210ENST00000532538 KIAA0753Q2KHM9 967 aa17.65■□□□□ 0.42
BRPF3-210ENST00000532538 GTF2IRD1Q9UHL9 959 aa17.65■□□□□ 0.42
BRPF3-210ENST00000532538 COL4A4P53420 1690 aaPredicted RBP17.64■□□□□ 0.42
BRPF3-210ENST00000532538 PARNO95453 639 aaKnown RBP17.64■□□□□ 0.41
BRPF3-210ENST00000532538 HOXA13P31271 388 aaPredicted RBP17.64■□□□□ 0.41
BRPF3-210ENST00000532538 TAP1Q03518 808 aa17.64■□□□□ 0.41
BRPF3-210ENST00000532538 TRAF1Q13077 416 aa17.64■□□□□ 0.41
BRPF3-210ENST00000532538 FAM117BQ6P1L5 589 aa17.64■□□□□ 0.41
BRPF3-210ENST00000532538 CNKSR3Q6P9H4 555 aa17.64■□□□□ 0.41
BRPF3-210ENST00000532538 SESTD1Q86VW0 696 aa17.64■□□□□ 0.41
BRPF3-210ENST00000532538 FCHSD1Q86WN1 690 aa17.64■□□□□ 0.41
BRPF3-210ENST00000532538 KAT2BQ92831 832 aa17.64■□□□□ 0.41
BRPF3-210ENST00000532538 SPATA33Q96N06 139 aa17.64■□□□□ 0.41
BRPF3-210ENST00000532538 MLXIPQ9HAP2 919 aa17.64■□□□□ 0.41
BRPF3-210ENST00000532538 MTCH2Q9Y6C9 303 aa17.64■□□□□ 0.41
BRPF3-210ENST00000532538 IFIT3O14879 490 aaKnown RBP17.63■□□□□ 0.41
BRPF3-210ENST00000532538 ZBTB5O15062 677 aa17.63■□□□□ 0.41
BRPF3-210ENST00000532538 GGPS1O95749 300 aa17.63■□□□□ 0.41
BRPF3-210ENST00000532538 CKBP12277 381 aa17.63■□□□□ 0.41
BRPF3-210ENST00000532538 COL9A1P20849 921 aa17.63■□□□□ 0.41
BRPF3-210ENST00000532538 CCND2P30279 289 aa17.63■□□□□ 0.41
BRPF3-210ENST00000532538 WDR5P61964 334 aaKnown RBP17.63■□□□□ 0.41
BRPF3-210ENST00000532538 KRT40Q6A162 431 aa17.63■□□□□ 0.41
BRPF3-210ENST00000532538 KCNV1Q6PIU1 500 aa17.63■□□□□ 0.41
BRPF3-210ENST00000532538 TMCO2Q7Z6W1 182 aaPredicted RBP17.63■□□□□ 0.41
BRPF3-210ENST00000532538 RALYLQ86SE5 291 aaKnown RBP17.63■□□□□ 0.41
BRPF3-210ENST00000532538 PPTC7Q8NI37 304 aa17.63■□□□□ 0.41
BRPF3-210ENST00000532538 RUFY2Q8WXA3 655 aa17.63■□□□□ 0.41
BRPF3-210ENST00000532538 PIBF1Q8WXW3 757 aa17.63■□□□□ 0.41
BRPF3-210ENST00000532538 ZFP91Q96JP5 570 aaPredicted RBP17.63■□□□□ 0.41
BRPF3-210ENST00000532538 MTUS1Q9ULD2 1270 aa17.63■□□□□ 0.41
BRPF3-210ENST00000532538 EPOPA6NHQ4 379 aa17.62■□□□□ 0.41
BRPF3-210ENST00000532538 GCOM1H8Y6P7 765 aaPredicted RBP17.62■□□□□ 0.41
BRPF3-210ENST00000532538 POLR2MP0CAP2 368 aa17.62■□□□□ 0.41
BRPF3-210ENST00000532538 HSD17B4P51659 736 aa17.62■□□□□ 0.41
BRPF3-210ENST00000532538 PTK7Q13308 1070 aa17.62■□□□□ 0.41
BRPF3-210ENST00000532538 IKBKEQ14164 716 aa17.62■□□□□ 0.41
BRPF3-210ENST00000532538 SART3Q15020 963 aaKnown RBP17.62■□□□□ 0.41
BRPF3-210ENST00000532538 CYB5R4Q7L1T6 521 aa17.62■□□□□ 0.41
BRPF3-210ENST00000532538 NECAB3Q96P71 396 aaPredicted RBP17.62■□□□□ 0.41
BRPF3-210ENST00000532538 PDCD2LQ9BRP1 358 aa17.62■□□□□ 0.41
BRPF3-210ENST00000532538 MAP3K20Q9NYL2 800 aaKnown RBP17.62■□□□□ 0.41
BRPF3-210ENST00000532538 U3KPZ7 1027 aaPredicted RBP17.62■□□□□ 0.41
BRPF3-210ENST00000532538 SIP14410 1827 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms