RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 EMID1Q96A84 441 aaPredicted RBP15.21■□□□□ 0.03
SF3B2-212ENST00000531589 TIFAQ96CG3 184 aa15.21■□□□□ 0.03
SF3B2-212ENST00000531589 TMEM87BQ96K49 555 aa15.21■□□□□ 0.03
SF3B2-212ENST00000531589 PDCD2LQ9BRP1 358 aa15.21■□□□□ 0.03
SF3B2-212ENST00000531589 MSRAQ9UJ68 235 aa15.21■□□□□ 0.03
SF3B2-212ENST00000531589 TAF6LQ9Y6J9 622 aa15.21■□□□□ 0.03
SF3B2-212ENST00000531589 CCDC69A6NI79 296 aa15.2■□□□□ 0.02
SF3B2-212ENST00000531589 PITPNM1O00562 1244 aa15.2■□□□□ 0.02
SF3B2-212ENST00000531589 PRC1O43663 620 aa15.2■□□□□ 0.02
SF3B2-212ENST00000531589 CYTH3O43739 400 aa15.2■□□□□ 0.02
SF3B2-212ENST00000531589 CALM1P0DP23 149 aa15.2■□□□□ 0.02
SF3B2-212ENST00000531589 CALM2P0DP24 149 aa15.2■□□□□ 0.02
SF3B2-212ENST00000531589 CALM3P0DP25 149 aa15.2■□□□□ 0.02
SF3B2-212ENST00000531589 TGFB3P10600 412 aa15.2■□□□□ 0.02
SF3B2-212ENST00000531589 CYP2C9P11712 490 aa15.2■□□□□ 0.02
SF3B2-212ENST00000531589 CCND2P30279 289 aa15.2■□□□□ 0.02
SF3B2-212ENST00000531589 HOXA13P31271 388 aaPredicted RBP15.2■□□□□ 0.02
SF3B2-212ENST00000531589 RFC2P35250 354 aa15.2■□□□□ 0.02
SF3B2-212ENST00000531589 ANTXR2P58335 489 aa15.2■□□□□ 0.02
SF3B2-212ENST00000531589 CHMP4BP1P59074 171 aa15.2■□□□□ 0.02
SF3B2-212ENST00000531589 RAB30Q15771 203 aa15.2■□□□□ 0.02
SF3B2-212ENST00000531589 RNF20Q5VTR2 975 aa15.2■□□□□ 0.02
SF3B2-212ENST00000531589 NFXL1Q6ZNB6 911 aa15.2■□□□□ 0.02
SF3B2-212ENST00000531589 OTOP2Q7RTS6 562 aa15.2■□□□□ 0.02
SF3B2-212ENST00000531589 DHX37Q8IY37 1157 aaKnown RBP15.2■□□□□ 0.02
SF3B2-212ENST00000531589 ZNF654Q8IZM8 581 aa15.2■□□□□ 0.02
SF3B2-212ENST00000531589 CCDC155Q8N6L0 562 aa15.2■□□□□ 0.02
SF3B2-212ENST00000531589 RRP36Q96EU6 259 aaKnown RBP15.2■□□□□ 0.02
SF3B2-212ENST00000531589 ESYT1Q9BSJ8 1104 aa15.2■□□□□ 0.02
SF3B2-212ENST00000531589 KATNAL1Q9BW62 490 aa15.2■□□□□ 0.02
SF3B2-212ENST00000531589 LSG1Q9H089 658 aaKnown RBP15.2■□□□□ 0.02
SF3B2-212ENST00000531589 WNT8AQ9H1J5 351 aa15.2■□□□□ 0.02
SF3B2-212ENST00000531589 ZNF576Q9H609 170 aa15.2■□□□□ 0.02
SF3B2-212ENST00000531589 SENP2Q9HC62 589 aa15.2■□□□□ 0.02
SF3B2-212ENST00000531589 SEC63Q9UGP8 760 aaKnown RBP15.2■□□□□ 0.02
SF3B2-212ENST00000531589 STAM2O75886 525 aa15.19■□□□□ 0.02
SF3B2-212ENST00000531589 ACTN1P12814 892 aa15.19■□□□□ 0.02
SF3B2-212ENST00000531589 FOSL2P15408 326 aa15.19■□□□□ 0.02
SF3B2-212ENST00000531589 LIFRP42702 1097 aa15.19■□□□□ 0.02
SF3B2-212ENST00000531589 PGM5Q15124 567 aa15.19■□□□□ 0.02
SF3B2-212ENST00000531589 BMP2KLQ5H9B9 411 aa15.19■□□□□ 0.02
SF3B2-212ENST00000531589 SESTD1Q86VW0 696 aa15.19■□□□□ 0.02
SF3B2-212ENST00000531589 FCHSD1Q86WN1 690 aa15.19■□□□□ 0.02
SF3B2-212ENST00000531589 MYLIPQ8WY64 445 aa15.19■□□□□ 0.02
SF3B2-212ENST00000531589 SPZ1Q9BXG8 430 aa15.19■□□□□ 0.02
SF3B2-212ENST00000531589 PBX4Q9BYU1 374 aa15.19■□□□□ 0.02
SF3B2-212ENST00000531589 LY9Q9HBG7 655 aa15.19■□□□□ 0.02
SF3B2-212ENST00000531589 ANO2Q9NQ90 1003 aa15.19■□□□□ 0.02
SF3B2-212ENST00000531589 SLC4A7Q9Y6M7 1214 aa15.19■□□□□ 0.02
SF3B2-212ENST00000531589 MYH6P13533 1939 aa15.18■□□□□ 0.02
SF3B2-212ENST00000531589 DLL1O00548 723 aa15.18■□□□□ 0.02
SF3B2-212ENST00000531589 SLC27A2O14975 620 aa15.18■□□□□ 0.02
SF3B2-212ENST00000531589 PPFIA4O75335 1185 aa15.18■□□□□ 0.02
SF3B2-212ENST00000531589 NECTIN1Q15223 517 aa15.18■□□□□ 0.02
SF3B2-212ENST00000531589 PTGISQ16647 500 aa15.18■□□□□ 0.02
SF3B2-212ENST00000531589 GNPTABQ3T906 1256 aa15.18■□□□□ 0.02
SF3B2-212ENST00000531589 C7orf31Q8N865 590 aa15.18■□□□□ 0.02
SF3B2-212ENST00000531589 MAFAQ8NHW3 353 aaPredicted RBP15.18■□□□□ 0.02
SF3B2-212ENST00000531589 PPTC7Q8NI37 304 aa15.18■□□□□ 0.02
SF3B2-212ENST00000531589 CAGE1Q8TC20 777 aa15.18■□□□□ 0.02
SF3B2-212ENST00000531589 CUL5Q93034 780 aa15.18■□□□□ 0.02
SF3B2-212ENST00000531589 SCLYQ96I15 445 aa15.18■□□□□ 0.02
SF3B2-212ENST00000531589 SH2B2O14492 632 aaPredicted RBP15.17■□□□□ 0.02
SF3B2-212ENST00000531589 PARNO95453 639 aaKnown RBP15.17■□□□□ 0.02
SF3B2-212ENST00000531589 IQCF3P0C7M6 154 aa15.17■□□□□ 0.02
SF3B2-212ENST00000531589 SLC35G1Q2M3R5 365 aa15.17■□□□□ 0.02
SF3B2-212ENST00000531589 MYSM1Q5VVJ2 828 aa15.17■□□□□ 0.02
SF3B2-212ENST00000531589 CREB3L3Q68CJ9 461 aa15.17■□□□□ 0.02
SF3B2-212ENST00000531589 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.17■□□□□ 0.02
SF3B2-212ENST00000531589 SMARCC2Q8TAQ2 1214 aa15.17■□□□□ 0.02
SF3B2-212ENST00000531589 CXXC1Q9P0U4 656 aaPredicted RBP15.17■□□□□ 0.02
SF3B2-212ENST00000531589 SLC12A7Q9Y666 1083 aa15.17■□□□□ 0.02
SF3B2-212ENST00000531589 ZBBXA8MT70 800 aa15.16■□□□□ 0.02
SF3B2-212ENST00000531589 GRXCR1A8MXD5 290 aa15.16■□□□□ 0.02
SF3B2-212ENST00000531589 PBX2P40425 430 aa15.16■□□□□ 0.02
SF3B2-212ENST00000531589 PSEN2P49810 448 aa15.16■□□□□ 0.02
SF3B2-212ENST00000531589 GRIN2CQ14957 1233 aa15.16■□□□□ 0.02
SF3B2-212ENST00000531589 CELF3Q5SZQ8 465 aaKnown RBP15.16■□□□□ 0.02
SF3B2-212ENST00000531589 SYNE3Q6ZMZ3 975 aa15.16■□□□□ 0.02
SF3B2-212ENST00000531589 DEFB128Q7Z7B8 93 aa15.16■□□□□ 0.02
SF3B2-212ENST00000531589 AFAP1L1Q8TED9 768 aa15.16■□□□□ 0.02
SF3B2-212ENST00000531589 PIBF1Q8WXW3 757 aa15.16■□□□□ 0.02
SF3B2-212ENST00000531589 KAT2BQ92831 832 aa15.16■□□□□ 0.02
SF3B2-212ENST00000531589 SPATA33Q96N06 139 aa15.16■□□□□ 0.02
SF3B2-212ENST00000531589 GAS2L1Q99501 681 aaPredicted RBP15.16■□□□□ 0.02
SF3B2-212ENST00000531589 MYL10Q9BUA6 226 aa15.16■□□□□ 0.02
SF3B2-212ENST00000531589 MLXIPQ9HAP2 919 aa15.16■□□□□ 0.02
SF3B2-212ENST00000531589 SLC28A3Q9HAS3 691 aa15.16■□□□□ 0.02
SF3B2-212ENST00000531589 GTF2IRD1Q9UHL9 959 aa15.16■□□□□ 0.02
SF3B2-212ENST00000531589 SCN10AQ9Y5Y9 1956 aa15.16■□□□□ 0.02
SF3B2-212ENST00000531589 RGS20O76081 388 aa15.15■□□□□ 0.02
SF3B2-212ENST00000531589 GGPS1O95749 300 aa15.15■□□□□ 0.02
SF3B2-212ENST00000531589 F2P00734 622 aa15.15■□□□□ 0.02
SF3B2-212ENST00000531589 NEDD9Q14511 834 aa15.15■□□□□ 0.02
SF3B2-212ENST00000531589 MFSD10Q14728 455 aa15.15■□□□□ 0.02
SF3B2-212ENST00000531589 XRRA1Q6P2D8 792 aa15.15■□□□□ 0.02
SF3B2-212ENST00000531589 FTOQ9C0B1 505 aaKnown RBP eCLIP15.15■□□□□ 0.027e-6■□□□□ 10.5
SF3B2-212ENST00000531589 COL6A3P12111 3177 aa15.14■□□□□ 0.01
SF3B2-212ENST00000531589 PIK3CDO00329 1044 aa15.14■□□□□ 0.01
SF3B2-212ENST00000531589 NOP56O00567 594 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms