RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 SORBS3O60504 671 aa25.52■■□□□ 1.68
LSM6-203ENST00000503982 MMP3P08254 477 aa25.52■■□□□ 1.68
LSM6-203ENST00000503982 DNAJB2P25686 324 aa25.52■■□□□ 1.68
LSM6-203ENST00000503982 KIF5BP33176 963 aa25.52■■□□□ 1.68
LSM6-203ENST00000503982 CCDC62Q6P9F0 684 aa25.52■■□□□ 1.68
LSM6-203ENST00000503982 SKAP1Q86WV1 359 aa25.52■■□□□ 1.68
LSM6-203ENST00000503982 DHX37Q8IY37 1157 aaKnown RBP25.52■■□□□ 1.68
LSM6-203ENST00000503982 SAMD3Q8N6K7 520 aa25.52■■□□□ 1.68
LSM6-203ENST00000503982 MYLIPQ8WY64 445 aa25.52■■□□□ 1.68
LSM6-203ENST00000503982 PDCD2LQ9BRP1 358 aa25.52■■□□□ 1.68
LSM6-203ENST00000503982 TTYH1Q9H313 450 aaPredicted RBP25.52■■□□□ 1.68
LSM6-203ENST00000503982 ZBBXA8MT70 800 aa25.51■■□□□ 1.67
LSM6-203ENST00000503982 SLC27A2O14975 620 aa25.51■■□□□ 1.67
LSM6-203ENST00000503982 CASTP20810 708 aaKnown RBP25.51■■□□□ 1.67
LSM6-203ENST00000503982 NFRKBQ6P4R8 1299 aa25.51■■□□□ 1.67
LSM6-203ENST00000503982 OTOP2Q7RTS6 562 aa25.51■■□□□ 1.67
LSM6-203ENST00000503982 RETREG2Q8NC44 543 aa25.51■■□□□ 1.67
LSM6-203ENST00000503982 TIFAQ96CG3 184 aa25.51■■□□□ 1.67
LSM6-203ENST00000503982 LY9Q9HBG7 655 aa25.51■■□□□ 1.67
LSM6-203ENST00000503982 SEC63Q9UGP8 760 aaKnown RBP25.51■■□□□ 1.67
LSM6-203ENST00000503982 COL6A3P12111 3177 aa25.51■■□□□ 1.67
LSM6-203ENST00000503982 SCN5AQ14524 2016 aa25.51■■□□□ 1.67
LSM6-203ENST00000503982 CYTH3O43739 400 aa25.5■■□□□ 1.67
LSM6-203ENST00000503982 DDAH1O94760 285 aa25.5■■□□□ 1.67
LSM6-203ENST00000503982 CCND2P30279 289 aa25.5■■□□□ 1.67
LSM6-203ENST00000503982 ARHGAP1Q07960 439 aa25.5■■□□□ 1.67
LSM6-203ENST00000503982 PGM5Q15124 567 aa25.5■■□□□ 1.67
LSM6-203ENST00000503982 DGKDQ16760 1214 aa25.5■■□□□ 1.67
LSM6-203ENST00000503982 SLC35G1Q2M3R5 365 aa25.5■■□□□ 1.67
LSM6-203ENST00000503982 CREB3L3Q68CJ9 461 aa25.5■■□□□ 1.67
LSM6-203ENST00000503982 DEFB128Q7Z7B8 93 aa25.5■■□□□ 1.67
LSM6-203ENST00000503982 GBF1Q92538 1859 aa25.5■■□□□ 1.67
LSM6-203ENST00000503982 RRP36Q96EU6 259 aaKnown RBP25.5■■□□□ 1.67
LSM6-203ENST00000503982 WNT8AQ9H1J5 351 aa25.5■■□□□ 1.67
LSM6-203ENST00000503982 DDX41Q9UJV9 622 aaKnown RBP25.5■■□□□ 1.67
LSM6-203ENST00000503982 TMEM265A0A087WTH1 108 aa25.49■■□□□ 1.67
LSM6-203ENST00000503982 GRXCR1A8MXD5 290 aa25.49■■□□□ 1.67
LSM6-203ENST00000503982 FOSL2P15408 326 aa25.49■■□□□ 1.67
LSM6-203ENST00000503982 PTPN11Q06124 597 aaPredicted RBP25.49■■□□□ 1.67
LSM6-203ENST00000503982 TMTC2Q8N394 836 aa25.49■■□□□ 1.67
LSM6-203ENST00000503982 ZFP91Q96JP5 570 aaPredicted RBP25.49■■□□□ 1.67
LSM6-203ENST00000503982 TMEM87BQ96K49 555 aa25.49■■□□□ 1.67
LSM6-203ENST00000503982 ALG1Q9BT22 464 aa25.49■■□□□ 1.67
LSM6-203ENST00000503982 TRIP12Q14669 1992 aaPredicted RBP25.49■■□□□ 1.67
LSM6-203ENST00000503982 LAMC2Q13753 1193 aa25.48■■□□□ 1.67
LSM6-203ENST00000503982 RNF20Q5VTR2 975 aa25.48■■□□□ 1.67
LSM6-203ENST00000503982 KCNV1Q6PIU1 500 aa25.48■■□□□ 1.67
LSM6-203ENST00000503982 HERVK_113Q902F9 699 aa25.48■■□□□ 1.67
LSM6-203ENST00000503982 CUL5Q93034 780 aa25.48■■□□□ 1.67
LSM6-203ENST00000503982 MSRAQ9UJ68 235 aa25.48■■□□□ 1.67
LSM6-203ENST00000503982 SH2B2O14492 632 aaPredicted RBP25.47■■□□□ 1.67
LSM6-203ENST00000503982 RXRAP19793 462 aa25.47■■□□□ 1.67
LSM6-203ENST00000503982 GNAQP50148 359 aa25.47■■□□□ 1.67
LSM6-203ENST00000503982 GHRHRQ02643 423 aa25.47■■□□□ 1.67
LSM6-203ENST00000503982 RAB11FIP4Q86YS3 637 aa25.47■■□□□ 1.67
LSM6-203ENST00000503982 CCDC155Q8N6L0 562 aa25.47■■□□□ 1.67
LSM6-203ENST00000503982 SMARCC2Q8TAQ2 1214 aa25.47■■□□□ 1.67
LSM6-203ENST00000503982 MTA3Q9BTC8 594 aa25.47■■□□□ 1.67
LSM6-203ENST00000503982 LRRC2Q9BYS8 371 aa25.47■■□□□ 1.67
LSM6-203ENST00000503982 CALM1P0DP23 149 aa25.46■■□□□ 1.67
LSM6-203ENST00000503982 CALM2P0DP24 149 aa25.46■■□□□ 1.67
LSM6-203ENST00000503982 CALM3P0DP25 149 aa25.46■■□□□ 1.67
LSM6-203ENST00000503982 PBX2P40425 430 aa25.46■■□□□ 1.67
LSM6-203ENST00000503982 BFSP2Q13515 415 aa25.46■■□□□ 1.67
LSM6-203ENST00000503982 PTGISQ16647 500 aa25.46■■□□□ 1.67
LSM6-203ENST00000503982 BMP2KLQ5H9B9 411 aa25.46■■□□□ 1.67
LSM6-203ENST00000503982 C7orf31Q8N865 590 aa25.46■■□□□ 1.67
LSM6-203ENST00000503982 MAFAQ8NHW3 353 aaPredicted RBP25.46■■□□□ 1.67
LSM6-203ENST00000503982 IL31RAQ8NI17 732 aa25.46■■□□□ 1.67
LSM6-203ENST00000503982 MAP3K14Q99558 947 aa25.46■■□□□ 1.67
LSM6-203ENST00000503982 LZTS2Q9BRK4 669 aa25.46■■□□□ 1.67
LSM6-203ENST00000503982 KATNAL1Q9BW62 490 aa25.46■■□□□ 1.67
LSM6-203ENST00000503982 PBX4Q9BYU1 374 aa25.46■■□□□ 1.67
LSM6-203ENST00000503982 FTOQ9C0B1 505 aaKnown RBP eCLIP25.46■■□□□ 1.67
LSM6-203ENST00000503982 ZNF576Q9H609 170 aa25.46■■□□□ 1.67
LSM6-203ENST00000503982 CXXC1Q9P0U4 656 aaPredicted RBP25.46■■□□□ 1.67
LSM6-203ENST00000503982 SLC4A7Q9Y6M7 1214 aa25.46■■□□□ 1.67
LSM6-203ENST00000503982 TANC1Q9C0D5 1861 aa25.46■■□□□ 1.67
LSM6-203ENST00000503982 GGPS1O95749 300 aa25.45■■□□□ 1.66
LSM6-203ENST00000503982 RAB30Q15771 203 aa25.45■■□□□ 1.66
LSM6-203ENST00000503982 SYNE3Q6ZMZ3 975 aa25.45■■□□□ 1.66
LSM6-203ENST00000503982 VSIG10LQ86VR7 867 aa25.45■■□□□ 1.66
LSM6-203ENST00000503982 SPATA33Q96N06 139 aa25.45■■□□□ 1.66
LSM6-203ENST00000503982 SPZ1Q9BXG8 430 aa25.45■■□□□ 1.66
LSM6-203ENST00000503982 MLXIPQ9HAP2 919 aa25.45■■□□□ 1.66
LSM6-203ENST00000503982 SLC12A7Q9Y666 1083 aa25.45■■□□□ 1.66
LSM6-203ENST00000503982 PLEKHA8P1O95397 391 aa25.44■■□□□ 1.66
LSM6-203ENST00000503982 ZNF286BP0CG31 522 aa25.44■■□□□ 1.66
LSM6-203ENST00000503982 ACTN1P12814 892 aa25.44■■□□□ 1.66
LSM6-203ENST00000503982 PSEN2P49810 448 aa25.44■■□□□ 1.66
LSM6-203ENST00000503982 RASIP1Q5U651 963 aa25.44■■□□□ 1.66
LSM6-203ENST00000503982 CMTR1Q8N1G2 835 aaKnown RBP25.44■■□□□ 1.66
LSM6-203ENST00000503982 PPTC7Q8NI37 304 aa25.44■■□□□ 1.66
LSM6-203ENST00000503982 DOCK5Q9H7D0 1870 aa25.43■■□□□ 1.66
LSM6-203ENST00000503982 DLL1O00548 723 aa25.43■■□□□ 1.66
LSM6-203ENST00000503982 PFKMP08237 780 aa25.43■■□□□ 1.66
LSM6-203ENST00000503982 MFSD10Q14728 455 aa25.43■■□□□ 1.66
LSM6-203ENST00000503982 NECTIN1Q15223 517 aa25.43■■□□□ 1.66
LSM6-203ENST00000503982 GNPTABQ3T906 1256 aa25.43■■□□□ 1.66
LSM6-203ENST00000503982 GDF6Q6KF10 455 aaPredicted RBP25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms