RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 SAMD3Q8N6K7 520 aa15.49■□□□□ 0.07
HMGB3-204ENST00000448905 TBC1D5Q92609 795 aa15.49■□□□□ 0.07
HMGB3-204ENST00000448905 VWCEQ96DN2 955 aa15.49■□□□□ 0.07
HMGB3-204ENST00000448905 CPVLQ9H3G5 476 aa15.49■□□□□ 0.07
HMGB3-204ENST00000448905 RAPGEFL1Q9UHV5 662 aa15.49■□□□□ 0.07
HMGB3-204ENST00000448905 GBF1Q92538 1859 aa15.48■□□□□ 0.07
HMGB3-204ENST00000448905 NEDD4P46934 1319 aa15.48■□□□□ 0.07
HMGB3-204ENST00000448905 B4E1Z4 1266 aa15.48■□□□□ 0.07
HMGB3-204ENST00000448905 TLL1O43897 1013 aa15.48■□□□□ 0.07
HMGB3-204ENST00000448905 PPFIA4O75335 1185 aa15.48■□□□□ 0.07
HMGB3-204ENST00000448905 ARIH2O95376 493 aa15.48■□□□□ 0.07
HMGB3-204ENST00000448905 CFBP00751 764 aa15.48■□□□□ 0.07
HMGB3-204ENST00000448905 NR3C2P08235 984 aa15.48■□□□□ 0.07
HMGB3-204ENST00000448905 MMP3P08254 477 aa15.48■□□□□ 0.07
HMGB3-204ENST00000448905 SELPP16109 830 aa15.48■□□□□ 0.07
HMGB3-204ENST00000448905 NUCB1Q02818 461 aa15.48■□□□□ 0.07
HMGB3-204ENST00000448905 TRDNQ13061 729 aa15.48■□□□□ 0.07
HMGB3-204ENST00000448905 QRICH1Q2TAL8 776 aa15.48■□□□□ 0.07
HMGB3-204ENST00000448905 IFIT1BQ5T764 474 aaKnown RBP15.48■□□□□ 0.07
HMGB3-204ENST00000448905 ENAHQ8N8S7 591 aaPredicted RBP15.48■□□□□ 0.07
HMGB3-204ENST00000448905 JMJD4Q9H9V9 463 aa15.48■□□□□ 0.07
HMGB3-204ENST00000448905 DDX41Q9UJV9 622 aaKnown RBP15.48■□□□□ 0.07
HMGB3-204ENST00000448905 COG5Q9UP83 839 aa15.48■□□□□ 0.07
HMGB3-204ENST00000448905 MRVI1Q9Y6F6 885 aa15.48■□□□□ 0.07
HMGB3-204ENST00000448905 KLRF2D3W0D1 207 aa15.47■□□□□ 0.07
HMGB3-204ENST00000448905 EFCAB14O75071 495 aa15.47■□□□□ 0.07
HMGB3-204ENST00000448905 EIF2AK2P19525 551 aaKnown RBP15.47■□□□□ 0.07
HMGB3-204ENST00000448905 ARHGAP1Q07960 439 aa15.47■□□□□ 0.07
HMGB3-204ENST00000448905 MYO9BQ13459 2157 aa15.47■□□□□ 0.07
HMGB3-204ENST00000448905 PPP1R13LQ8WUF5 828 aa15.47■□□□□ 0.07
HMGB3-204ENST00000448905 ARNTL2Q8WYA1 636 aa15.47■□□□□ 0.07
HMGB3-204ENST00000448905 EMID1Q96A84 441 aaPredicted RBP15.47■□□□□ 0.07
HMGB3-204ENST00000448905 CERS4Q9HA82 394 aa15.47■□□□□ 0.07
HMGB3-204ENST00000448905 MTCH2Q9Y6C9 303 aa15.47■□□□□ 0.07
HMGB3-204ENST00000448905 ABHD14A-ACY1A0A1B0GW23 586 aa15.46■□□□□ 0.07
HMGB3-204ENST00000448905 TGFB3P10600 412 aa15.46■□□□□ 0.07
HMGB3-204ENST00000448905 IKBKEQ14164 716 aa15.46■□□□□ 0.07
HMGB3-204ENST00000448905 GDF6Q6KF10 455 aaPredicted RBP15.46■□□□□ 0.07
HMGB3-204ENST00000448905 LRRC8DQ7L1W4 858 aa15.46■□□□□ 0.07
HMGB3-204ENST00000448905 PPTC7Q8NI37 304 aa15.46■□□□□ 0.07
HMGB3-204ENST00000448905 PXMP2Q9NR77 195 aa15.46■□□□□ 0.07
HMGB3-204ENST00000448905 GTF2IRD1Q9UHL9 959 aa15.46■□□□□ 0.07
HMGB3-204ENST00000448905 PCDHA1Q9Y5I3 950 aa15.46■□□□□ 0.07
HMGB3-204ENST00000448905 ERICH2A1L162 156 aa15.45■□□□□ 0.06
HMGB3-204ENST00000448905 RFXAPO00287 272 aa15.45■□□□□ 0.06
HMGB3-204ENST00000448905 MYCLP12524 364 aaPredicted RBP15.45■□□□□ 0.06
HMGB3-204ENST00000448905 BMP1P13497 986 aa15.45■□□□□ 0.06
HMGB3-204ENST00000448905 PSEN2P49810 448 aa15.45■□□□□ 0.06
HMGB3-204ENST00000448905 TAP1Q03518 808 aa15.45■□□□□ 0.06
HMGB3-204ENST00000448905 PTK7Q13308 1070 aa15.45■□□□□ 0.06
HMGB3-204ENST00000448905 KIAA0753Q2KHM9 967 aa15.45■□□□□ 0.06
HMGB3-204ENST00000448905 CNKSR3Q6P9H4 555 aa15.45■□□□□ 0.06
HMGB3-204ENST00000448905 KAT2BQ92831 832 aa15.45■□□□□ 0.06
HMGB3-204ENST00000448905 RAD9AQ99638 391 aa15.45■□□□□ 0.06
HMGB3-204ENST00000448905 ALG1Q9BT22 464 aa15.45■□□□□ 0.06
HMGB3-204ENST00000448905 COL20A1Q9P218 1284 aa15.45■□□□□ 0.06
HMGB3-204ENST00000448905 HDAC6Q9UBN7 1215 aa15.45■□□□□ 0.06
HMGB3-204ENST00000448905 ZBTB5O15062 677 aa15.44■□□□□ 0.06
HMGB3-204ENST00000448905 IGHDP01880 384 aa15.44■□□□□ 0.06
HMGB3-204ENST00000448905 CKBP12277 381 aa15.44■□□□□ 0.06
HMGB3-204ENST00000448905 COL9A1P20849 921 aa15.44■□□□□ 0.06
HMGB3-204ENST00000448905 HSD17B4P51659 736 aa15.44■□□□□ 0.06
HMGB3-204ENST00000448905 MFSD10Q14728 455 aa15.44■□□□□ 0.06
HMGB3-204ENST00000448905 STOX1Q6ZVD7 989 aa15.44■□□□□ 0.06
HMGB3-204ENST00000448905 RUFY2Q8WXA3 655 aa15.44■□□□□ 0.06
HMGB3-204ENST00000448905 HLA-CQ95604 372 aa15.44■□□□□ 0.06
HMGB3-204ENST00000448905 SPATA33Q96N06 139 aa15.44■□□□□ 0.06
HMGB3-204ENST00000448905 MLXIPQ9HAP2 919 aa15.44■□□□□ 0.06
HMGB3-204ENST00000448905 LMCD1Q9NZU5 365 aa15.44■□□□□ 0.06
HMGB3-204ENST00000448905 CHD9Q3L8U1 2897 aa15.43■□□□□ 0.06
HMGB3-204ENST00000448905 GCOM1H8Y6P7 765 aaPredicted RBP15.43■□□□□ 0.06
HMGB3-204ENST00000448905 CXCL10P02778 98 aa15.43■□□□□ 0.06
HMGB3-204ENST00000448905 POLR2MP0CAP2 368 aa15.43■□□□□ 0.06
HMGB3-204ENST00000448905 WDR5P61964 334 aaKnown RBP15.43■□□□□ 0.06
HMGB3-204ENST00000448905 RBL2Q08999 1139 aa15.43■□□□□ 0.06
HMGB3-204ENST00000448905 SART3Q15020 963 aaKnown RBP15.43■□□□□ 0.06
HMGB3-204ENST00000448905 VSIG10LQ86VR7 867 aa15.43■□□□□ 0.06
HMGB3-204ENST00000448905 PDCD2LQ9BRP1 358 aa15.43■□□□□ 0.06
HMGB3-204ENST00000448905 C1QTNF1Q9BXJ1 281 aa15.43■□□□□ 0.06
HMGB3-204ENST00000448905 U3KPZ7 1027 aaPredicted RBP15.43■□□□□ 0.06
HMGB3-204ENST00000448905 TCF20Q9UGU0 1960 aaKnown RBP15.43■□□□□ 0.06
HMGB3-204ENST00000448905 RBAK-RBAKDNI3L0D1 243 aa15.42■□□□□ 0.06
HMGB3-204ENST00000448905 F2P00734 622 aa15.42■□□□□ 0.06
HMGB3-204ENST00000448905 CCND2P30279 289 aa15.42■□□□□ 0.06
HMGB3-204ENST00000448905 TFF2Q03403 129 aa15.42■□□□□ 0.06
HMGB3-204ENST00000448905 CELF3Q5SZQ8 465 aaKnown RBP15.42■□□□□ 0.06
HMGB3-204ENST00000448905 MYSM1Q5VVJ2 828 aa15.42■□□□□ 0.06
HMGB3-204ENST00000448905 STAG2Q8N3U4 1231 aa15.42■□□□□ 0.06
HMGB3-204ENST00000448905 EMSYQ7Z589 1322 aa15.42■□□□□ 0.06
HMGB3-204ENST00000448905 REV3LO60673 3130 aa15.41■□□□□ 0.06
HMGB3-204ENST00000448905 PALM3A6NDB9 673 aaPredicted RBP15.41■□□□□ 0.06
HMGB3-204ENST00000448905 HAS3O00219 553 aa15.41■□□□□ 0.06
HMGB3-204ENST00000448905 IFIT3O14879 490 aaKnown RBP15.41■□□□□ 0.06
HMGB3-204ENST00000448905 GHRHRQ02643 423 aa15.41■□□□□ 0.06
HMGB3-204ENST00000448905 GRB10Q13322 594 aa15.41■□□□□ 0.06
HMGB3-204ENST00000448905 GNPTABQ3T906 1256 aa15.41■□□□□ 0.06
HMGB3-204ENST00000448905 MTMR8Q96EF0 704 aa15.41■□□□□ 0.06
HMGB3-204ENST00000448905 NECAB3Q96P71 396 aaPredicted RBP15.41■□□□□ 0.06
HMGB3-204ENST00000448905 TGS1Q96RS0 853 aaKnown RBP15.41■□□□□ 0.06
HMGB3-204ENST00000448905 CTAGE1Q96RT6 745 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms