RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 DGKDQ16760 1214 aa21.76■■□□□ 1.07
CCDC78-204ENST00000439619 ZNF365Q70YC5 407 aa21.76■■□□□ 1.07
CCDC78-204ENST00000439619 DHX37Q8IY37 1157 aaKnown RBP21.76■■□□□ 1.07
CCDC78-204ENST00000439619 PDCD2LQ9BRP1 358 aa21.76■■□□□ 1.07
CCDC78-204ENST00000439619 LY9Q9HBG7 655 aa21.76■■□□□ 1.07
CCDC78-204ENST00000439619 TRMT13Q9NUP7 481 aaKnown RBP21.76■■□□□ 1.07
CCDC78-204ENST00000439619 DDX41Q9UJV9 622 aaKnown RBP21.76■■□□□ 1.07
CCDC78-204ENST00000439619 OPLAHO14841 1288 aa21.75■■□□□ 1.07
CCDC78-204ENST00000439619 SLC27A2O14975 620 aa21.75■■□□□ 1.07
CCDC78-204ENST00000439619 PFKMP08237 780 aa21.75■■□□□ 1.07
CCDC78-204ENST00000439619 MMP3P08254 477 aa21.75■■□□□ 1.07
CCDC78-204ENST00000439619 SMARCA1P28370 1054 aa21.75■■□□□ 1.07
CCDC78-204ENST00000439619 CCND2P30279 289 aa21.75■■□□□ 1.07
CCDC78-204ENST00000439619 C16orf59Q7L2K0 433 aa21.75■■□□□ 1.07
CCDC78-204ENST00000439619 FCHSD1Q86WN1 690 aa21.75■■□□□ 1.07
CCDC78-204ENST00000439619 RETREG2Q8NC44 543 aa21.75■■□□□ 1.07
CCDC78-204ENST00000439619 CUL5Q93034 780 aa21.75■■□□□ 1.07
CCDC78-204ENST00000439619 GUCD1Q96NT3 240 aa21.75■■□□□ 1.07
CCDC78-204ENST00000439619 CYTH3O43739 400 aa21.74■■□□□ 1.07
CCDC78-204ENST00000439619 DNAJB2P25686 324 aa21.74■■□□□ 1.07
CCDC78-204ENST00000439619 ARHGAP1Q07960 439 aa21.74■■□□□ 1.07
CCDC78-204ENST00000439619 BFSP2Q13515 415 aa21.74■■□□□ 1.07
CCDC78-204ENST00000439619 CREB3L3Q68CJ9 461 aa21.74■■□□□ 1.07
CCDC78-204ENST00000439619 SYNE3Q6ZMZ3 975 aa21.74■■□□□ 1.07
CCDC78-204ENST00000439619 VSIG10LQ86VR7 867 aa21.74■■□□□ 1.07
CCDC78-204ENST00000439619 CCDC155Q8N6L0 562 aa21.74■■□□□ 1.07
CCDC78-204ENST00000439619 PIBF1Q8WXW3 757 aa21.74■■□□□ 1.07
CCDC78-204ENST00000439619 HERVK_113Q902F9 699 aa21.74■■□□□ 1.07
CCDC78-204ENST00000439619 EMID1Q96A84 441 aaPredicted RBP21.74■■□□□ 1.07
CCDC78-204ENST00000439619 CDX2Q99626 313 aaPredicted RBP21.74■■□□□ 1.07
CCDC78-204ENST00000439619 KATNAL1Q9BW62 490 aa21.74■■□□□ 1.07
CCDC78-204ENST00000439619 SPZ1Q9BXG8 430 aa21.74■■□□□ 1.07
CCDC78-204ENST00000439619 SLC12A7Q9Y666 1083 aa21.74■■□□□ 1.07
CCDC78-204ENST00000439619 TGFB3P10600 412 aa21.73■■□□□ 1.07
CCDC78-204ENST00000439619 CYP2C9P11712 490 aa21.73■■□□□ 1.07
CCDC78-204ENST00000439619 LIFRP42702 1097 aa21.73■■□□□ 1.07
CCDC78-204ENST00000439619 PGM5Q15124 567 aa21.73■■□□□ 1.07
CCDC78-204ENST00000439619 NECTIN1Q15223 517 aa21.73■■□□□ 1.07
CCDC78-204ENST00000439619 GNPTABQ3T906 1256 aa21.73■■□□□ 1.07
CCDC78-204ENST00000439619 UMODL1Q5DID0 1318 aa21.73■■□□□ 1.07
CCDC78-204ENST00000439619 PITPNM1O00562 1244 aa21.72■■□□□ 1.07
CCDC78-204ENST00000439619 SH2B2O14492 632 aaPredicted RBP21.72■■□□□ 1.07
CCDC78-204ENST00000439619 STAM2O75886 525 aa21.72■■□□□ 1.07
CCDC78-204ENST00000439619 RFC2P35250 354 aa21.72■■□□□ 1.07
CCDC78-204ENST00000439619 RASIP1Q5U651 963 aa21.72■■□□□ 1.07
CCDC78-204ENST00000439619 PPTC7Q8NI37 304 aa21.72■■□□□ 1.07
CCDC78-204ENST00000439619 SMARCC2Q8TAQ2 1214 aa21.72■■□□□ 1.07
CCDC78-204ENST00000439619 TIFAQ96CG3 184 aa21.72■■□□□ 1.07
CCDC78-204ENST00000439619 MYL10Q9BUA6 226 aa21.72■■□□□ 1.07
CCDC78-204ENST00000439619 WNT8AQ9H1J5 351 aa21.72■■□□□ 1.07
CCDC78-204ENST00000439619 MSRAQ9UJ68 235 aa21.72■■□□□ 1.07
CCDC78-204ENST00000439619 ACTN1P12814 892 aa21.71■■□□□ 1.07
CCDC78-204ENST00000439619 RAB30Q15771 203 aa21.71■■□□□ 1.07
CCDC78-204ENST00000439619 PTGISQ16647 500 aa21.71■■□□□ 1.07
CCDC78-204ENST00000439619 SLC35G1Q2M3R5 365 aa21.71■■□□□ 1.07
CCDC78-204ENST00000439619 OTOP2Q7RTS6 562 aa21.71■■□□□ 1.07
CCDC78-204ENST00000439619 C7orf31Q8N865 590 aa21.71■■□□□ 1.07
CCDC78-204ENST00000439619 TTYH1Q9H313 450 aaPredicted RBP21.71■■□□□ 1.07
CCDC78-204ENST00000439619 CDC45O75419 566 aa21.7■■□□□ 1.06
CCDC78-204ENST00000439619 SESTD1Q86VW0 696 aa21.7■■□□□ 1.06
CCDC78-204ENST00000439619 SCLYQ96I15 445 aa21.7■■□□□ 1.06
CCDC78-204ENST00000439619 SPATA33Q96N06 139 aa21.7■■□□□ 1.06
CCDC78-204ENST00000439619 MLXIPQ9HAP2 919 aa21.7■■□□□ 1.06
CCDC78-204ENST00000439619 SLC4A7Q9Y6M7 1214 aa21.7■■□□□ 1.06
CCDC78-204ENST00000439619 ZBBXA8MT70 800 aa21.69■■□□□ 1.06
CCDC78-204ENST00000439619 PPFIA4O75335 1185 aa21.69■■□□□ 1.06
CCDC78-204ENST00000439619 FOSL2P15408 326 aa21.69■■□□□ 1.06
CCDC78-204ENST00000439619 KRT32Q14532 448 aa21.69■■□□□ 1.06
CCDC78-204ENST00000439619 CELF3Q5SZQ8 465 aaKnown RBP21.69■■□□□ 1.06
CCDC78-204ENST00000439619 CAGE1Q8TC20 777 aa21.69■■□□□ 1.06
CCDC78-204ENST00000439619 CCDC136Q96JN2 1154 aa21.69■■□□□ 1.06
CCDC78-204ENST00000439619 NEK1Q96PY6 1258 aa21.69■■□□□ 1.06
CCDC78-204ENST00000439619 ZNF576Q9H609 170 aa21.69■■□□□ 1.06
CCDC78-204ENST00000439619 GGPS1O95749 300 aa21.68■■□□□ 1.06
CCDC78-204ENST00000439619 MYSM1Q5VVJ2 828 aa21.68■■□□□ 1.06
CCDC78-204ENST00000439619 XRRA1Q6P2D8 792 aa21.68■■□□□ 1.06
CCDC78-204ENST00000439619 DEFB128Q7Z7B8 93 aa21.68■■□□□ 1.06
CCDC78-204ENST00000439619 MYLIPQ8WY64 445 aa21.68■■□□□ 1.06
CCDC78-204ENST00000439619 PBX4Q9BYU1 374 aa21.68■■□□□ 1.06
CCDC78-204ENST00000439619 NOP56O00567 594 aaKnown RBP21.67■■□□□ 1.06
CCDC78-204ENST00000439619 PSEN2P49810 448 aa21.67■■□□□ 1.06
CCDC78-204ENST00000439619 MFSD10Q14728 455 aa21.67■■□□□ 1.06
CCDC78-204ENST00000439619 FANCBQ8NB91 859 aa21.67■■□□□ 1.06
CCDC78-204ENST00000439619 MAFAQ8NHW3 353 aaPredicted RBP21.67■■□□□ 1.06
CCDC78-204ENST00000439619 IL31RAQ8NI17 732 aa21.67■■□□□ 1.06
CCDC78-204ENST00000439619 FTOQ9C0B1 505 aaKnown RBP eCLIP21.67■■□□□ 1.06
CCDC78-204ENST00000439619 PIK3CDO00329 1044 aa21.66■■□□□ 1.06
CCDC78-204ENST00000439619 RGS20O76081 388 aa21.66■■□□□ 1.06
CCDC78-204ENST00000439619 PLEKHA8P1O95397 391 aa21.66■■□□□ 1.06
CCDC78-204ENST00000439619 PARNO95453 639 aaKnown RBP21.66■■□□□ 1.06
CCDC78-204ENST00000439619 F2P00734 622 aa21.66■■□□□ 1.06
CCDC78-204ENST00000439619 IQCF3P0C7M6 154 aa21.66■■□□□ 1.06
CCDC78-204ENST00000439619 UBA1P22314 1058 aaKnown RBP21.66■■□□□ 1.06
CCDC78-204ENST00000439619 NEDD9Q14511 834 aa21.66■■□□□ 1.06
CCDC78-204ENST00000439619 KIAA0753Q2KHM9 967 aa21.66■■□□□ 1.06
CCDC78-204ENST00000439619 SGMS1Q86VZ5 419 aa21.66■■□□□ 1.06
CCDC78-204ENST00000439619 SRBD1Q8N5C6 995 aaKnown RBP21.66■■□□□ 1.06
CCDC78-204ENST00000439619 AFAP1L1Q8TED9 768 aa21.66■■□□□ 1.06
CCDC78-204ENST00000439619 PPP1R13LQ8WUF5 828 aa21.66■■□□□ 1.06
CCDC78-204ENST00000439619 KAT2BQ92831 832 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms