RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 USP17L5A8MUK1 530 aa17.43■□□□□ 0.38
HOXA3-202ENST00000396352 ASTE1Q2TB18 679 aaPredicted RBP17.43■□□□□ 0.38
HOXA3-202ENST00000396352 RC3H1Q5TC82 1133 aaKnown RBP17.43■□□□□ 0.38
HOXA3-202ENST00000396352 NFRKBQ6P4R8 1299 aa17.43■□□□□ 0.38
HOXA3-202ENST00000396352 CCDC84Q86UT8 332 aaPredicted RBP17.43■□□□□ 0.38
HOXA3-202ENST00000396352 GLIS3Q8NEA6 775 aa17.43■□□□□ 0.38
HOXA3-202ENST00000396352 SPATA4Q8NEY3 305 aa17.43■□□□□ 0.38
HOXA3-202ENST00000396352 ZFP91Q96JP5 570 aaPredicted RBP17.43■□□□□ 0.38
HOXA3-202ENST00000396352 UBA5Q9GZZ9 404 aa17.43■□□□□ 0.38
HOXA3-202ENST00000396352 RIOX1Q9H6W3 641 aa17.43■□□□□ 0.38
HOXA3-202ENST00000396352 MMRN2Q9H8L6 949 aa17.43■□□□□ 0.38
HOXA3-202ENST00000396352 DMGDHQ9UI17 866 aaKnown RBP17.43■□□□□ 0.38
HOXA3-202ENST00000396352 ZPR1O75312 459 aa17.43■□□□□ 0.38
HOXA3-202ENST00000396352 TDP2O95551 362 aa17.43■□□□□ 0.38
HOXA3-202ENST00000396352 LDHCP07864 332 aa17.43■□□□□ 0.38
HOXA3-202ENST00000396352 LRRC63Q05C16 580 aa17.43■□□□□ 0.38
HOXA3-202ENST00000396352 C10orf67Q8IYJ2 551 aa17.43■□□□□ 0.38
HOXA3-202ENST00000396352 RUBCNQ92622 972 aa17.43■□□□□ 0.38
HOXA3-202ENST00000396352 RAD54LQ92698 747 aa17.43■□□□□ 0.38
HOXA3-202ENST00000396352 HINFPQ9BQA5 517 aa17.43■□□□□ 0.38
HOXA3-202ENST00000396352 NUDT12Q9BQG2 462 aa17.43■□□□□ 0.38
HOXA3-202ENST00000396352 RASSF4Q9H2L5 321 aa17.43■□□□□ 0.38
HOXA3-202ENST00000396352 POTEMA6NI47 508 aa17.43■□□□□ 0.38
HOXA3-202ENST00000396352 PJA2O43164 708 aa17.43■□□□□ 0.38
HOXA3-202ENST00000396352 RRAGAQ7L523 313 aa17.43■□□□□ 0.38
HOXA3-202ENST00000396352 KCNK18Q7Z418 384 aa17.43■□□□□ 0.38
HOXA3-202ENST00000396352 GPIHBP1Q8IV16 184 aa17.43■□□□□ 0.38
HOXA3-202ENST00000396352 GOLGA6L1Q8N7Z2 621 aa17.43■□□□□ 0.38
HOXA3-202ENST00000396352 ZNF804AQ7Z570 1209 aa17.42■□□□□ 0.38
HOXA3-202ENST00000396352 DEF6Q9H4E7 631 aa17.42■□□□□ 0.38
HOXA3-202ENST00000396352 GPR75-ASB3A0A0A6YYF3 556 aa17.42■□□□□ 0.38
HOXA3-202ENST00000396352 GNPATO15228 680 aa17.42■□□□□ 0.38
HOXA3-202ENST00000396352 ATP2B2Q01814 1243 aa17.42■□□□□ 0.38
HOXA3-202ENST00000396352 GRAPQ13588 217 aa17.42■□□□□ 0.38
HOXA3-202ENST00000396352 GRAPLQ8TC17 118 aaPredicted RBP17.42■□□□□ 0.38
HOXA3-202ENST00000396352 SMARCAL1Q9NZC9 954 aa17.42■□□□□ 0.38
HOXA3-202ENST00000396352 BTAF1O14981 1849 aa17.42■□□□□ 0.38
HOXA3-202ENST00000396352 AKR1B10O60218 316 aa17.41■□□□□ 0.38
HOXA3-202ENST00000396352 SHOX2O60902 331 aaPredicted RBP17.41■□□□□ 0.38
HOXA3-202ENST00000396352 TMEM119Q4V9L6 283 aa17.41■□□□□ 0.38
HOXA3-202ENST00000396352 HGSNATQ68CP4 663 aa17.41■□□□□ 0.38
HOXA3-202ENST00000396352 PDXDC1Q6P996 788 aa17.41■□□□□ 0.38
HOXA3-202ENST00000396352 EHD2Q9NZN4 543 aa17.41■□□□□ 0.38
HOXA3-202ENST00000396352 HYOU1Q9Y4L1 999 aa17.41■□□□□ 0.38
HOXA3-202ENST00000396352 GOLGA6BA6NDN3 693 aa17.41■□□□□ 0.38
HOXA3-202ENST00000396352 TCP1P17987 556 aaKnown RBP17.41■□□□□ 0.38
HOXA3-202ENST00000396352 CXCR5P32302 372 aa17.41■□□□□ 0.38
HOXA3-202ENST00000396352 TEX11Q8IYF3 940 aa17.41■□□□□ 0.38
HOXA3-202ENST00000396352 CCDC155Q8N6L0 562 aa17.41■□□□□ 0.38
HOXA3-202ENST00000396352 DDX12PQ92771 950 aa17.41■□□□□ 0.38
HOXA3-202ENST00000396352 ALS2CR12Q96Q35 445 aa17.41■□□□□ 0.38
HOXA3-202ENST00000396352 FGFR1OPO95684 399 aaKnown RBP17.41■□□□□ 0.38
HOXA3-202ENST00000396352 PDHBP11177 359 aa17.41■□□□□ 0.38
HOXA3-202ENST00000396352 ERCC3P19447 782 aa17.41■□□□□ 0.38
HOXA3-202ENST00000396352 RHBDL3P58872 404 aa17.41■□□□□ 0.38
HOXA3-202ENST00000396352 KCNMA1Q12791 1236 aa17.41■□□□□ 0.38
HOXA3-202ENST00000396352 MAPK8IP2Q13387 824 aaPredicted RBP17.41■□□□□ 0.38
HOXA3-202ENST00000396352 CCDC70Q6NSX1 233 aa17.41■□□□□ 0.38
HOXA3-202ENST00000396352 C15orf52Q6ZUT6 534 aaKnown RBP17.41■□□□□ 0.38
HOXA3-202ENST00000396352 FRMPD2Q68DX3 1309 aaPredicted RBP17.4■□□□□ 0.38
HOXA3-202ENST00000396352 hCG_1984214I3L0E3 225 aa17.4■□□□□ 0.38
HOXA3-202ENST00000396352 NCK2O43639 380 aa17.4■□□□□ 0.38
HOXA3-202ENST00000396352 GFPT1Q06210 699 aaPredicted RBP17.4■□□□□ 0.38
HOXA3-202ENST00000396352 PDIA5Q14554 519 aa17.4■□□□□ 0.38
HOXA3-202ENST00000396352 LRRC41Q15345 812 aa17.4■□□□□ 0.38
HOXA3-202ENST00000396352 TMEM266Q2M3C6 531 aa17.4■□□□□ 0.38
HOXA3-202ENST00000396352 ZCWPW2Q504Y3 356 aa17.4■□□□□ 0.38
HOXA3-202ENST00000396352 HAUS3Q68CZ6 603 aa17.4■□□□□ 0.38
HOXA3-202ENST00000396352 FOXR2Q6PJQ5 311 aa17.4■□□□□ 0.38
HOXA3-202ENST00000396352 CERS3Q8IU89 383 aa17.4■□□□□ 0.38
HOXA3-202ENST00000396352 ZNF713Q8N859 430 aaPredicted RBP17.4■□□□□ 0.38
HOXA3-202ENST00000396352 COA7Q96BR5 231 aa17.4■□□□□ 0.38
HOXA3-202ENST00000396352 MTMR8Q96EF0 704 aa17.4■□□□□ 0.38
HOXA3-202ENST00000396352 CDK5RAP3Q96JB5 506 aa17.4■□□□□ 0.38
HOXA3-202ENST00000396352 PSMB7Q99436 277 aa17.4■□□□□ 0.38
HOXA3-202ENST00000396352 TLR10Q9BXR5 811 aa17.4■□□□□ 0.38
HOXA3-202ENST00000396352 PLEKHA4Q9H4M7 779 aa17.4■□□□□ 0.38
HOXA3-202ENST00000396352 ATAD5Q96QE3 1844 aa17.4■□□□□ 0.38
HOXA3-202ENST00000396352 ARFGEF1Q9Y6D6 1849 aa17.4■□□□□ 0.38
HOXA3-202ENST00000396352 MRPS25P82663 173 aaKnown RBP17.4■□□□□ 0.38
HOXA3-202ENST00000396352 ECM1Q16610 540 aa17.4■□□□□ 0.38
HOXA3-202ENST00000396352 MYH7BA7E2Y1 1941 aa17.4■□□□□ 0.38
HOXA3-202ENST00000396352 PPFIA4O75335 1185 aa17.39■□□□□ 0.38
HOXA3-202ENST00000396352 SLC1A4P43007 532 aa17.39■□□□□ 0.38
HOXA3-202ENST00000396352 MAGEA1P43355 309 aa17.39■□□□□ 0.38
HOXA3-202ENST00000396352 ADCY7P51828 1080 aa17.39■□□□□ 0.38
HOXA3-202ENST00000396352 SLC7A5Q01650 507 aa17.39■□□□□ 0.38
HOXA3-202ENST00000396352 SND1Q7KZF4 910 aaKnown RBP eCLIP17.39■□□□□ 0.38
HOXA3-202ENST00000396352 SNX29Q8TEQ0 813 aa17.39■□□□□ 0.38
HOXA3-202ENST00000396352 TAF1LQ8IZX4 1826 aa17.39■□□□□ 0.37
HOXA3-202ENST00000396352 RBAK-RBAKDNI3L0D1 243 aa17.39■□□□□ 0.37
HOXA3-202ENST00000396352 PSMD2Q13200 908 aa17.39■□□□□ 0.37
HOXA3-202ENST00000396352 KLHDC7AQ5VTJ3 777 aa17.39■□□□□ 0.37
HOXA3-202ENST00000396352 ANKRD13CQ8N6S4 541 aa17.39■□□□□ 0.37
HOXA3-202ENST00000396352 ARHGEF1Q92888 912 aaKnown RBP17.39■□□□□ 0.37
HOXA3-202ENST00000396352 TRIM34Q9BYJ4 488 aa17.39■□□□□ 0.37
HOXA3-202ENST00000396352 RSPH14Q9UHP6 348 aa17.39■□□□□ 0.37
HOXA3-202ENST00000396352 PLIN4Q96Q06 1357 aa17.39■□□□□ 0.37
HOXA3-202ENST00000396352 SSU72P8A0A1W2PR75 194 aa17.39■□□□□ 0.37
HOXA3-202ENST00000396352 DNAJC19Q96DA6 116 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms