RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 GJA10Q969M2 543 aa16.95■□□□□ 0.3
PERM1-201ENST00000341290 TMEM47Q9BQJ4 181 aa16.95■□□□□ 0.3
PERM1-201ENST00000341290 CCSER1Q9C0I3 900 aa16.95■□□□□ 0.3
PERM1-201ENST00000341290 KANSL2Q9H9L4 492 aa16.95■□□□□ 0.3
PERM1-201ENST00000341290 BARHL2Q9NY43 387 aa16.95■□□□□ 0.3
PERM1-201ENST00000341290 GOLGA6BA6NDN3 693 aa16.94■□□□□ 0.3
PERM1-201ENST00000341290 SMCO2A6NFE2 343 aa16.94■□□□□ 0.3
PERM1-201ENST00000341290 AKR1B10O60218 316 aa16.94■□□□□ 0.3
PERM1-201ENST00000341290 OR52Z1P0C646 297 aa16.94■□□□□ 0.3
PERM1-201ENST00000341290 POTEDQ86YR6 584 aa16.94■□□□□ 0.3
PERM1-201ENST00000341290 CREG2Q8IUH2 290 aa16.94■□□□□ 0.3
PERM1-201ENST00000341290 BANK1Q8NDB2 785 aa16.94■□□□□ 0.3
PERM1-201ENST00000341290 UBA5Q9GZZ9 404 aa16.94■□□□□ 0.3
PERM1-201ENST00000341290 PCDHA13Q9Y5I0 950 aa16.94■□□□□ 0.3
PERM1-201ENST00000341290 MYH10P35580 1976 aa16.94■□□□□ 0.3
PERM1-201ENST00000341290 MAGEA9P43362 315 aa16.94■□□□□ 0.3
PERM1-201ENST00000341290 VAV2P52735 878 aa16.94■□□□□ 0.3
PERM1-201ENST00000341290 RNASE9P60153 205 aaKnown RBP16.94■□□□□ 0.3
PERM1-201ENST00000341290 DDR1Q08345 913 aa16.94■□□□□ 0.3
PERM1-201ENST00000341290 GRM4Q14833 912 aa16.94■□□□□ 0.3
PERM1-201ENST00000341290 C12orf60Q5U649 245 aa16.94■□□□□ 0.3
PERM1-201ENST00000341290 MS4A14Q96JA4 679 aa16.94■□□□□ 0.3
PERM1-201ENST00000341290 TANGO6Q9C0B7 1094 aa16.94■□□□□ 0.3
PERM1-201ENST00000341290 SALL4Q9UJQ4 1053 aa16.94■□□□□ 0.3
PERM1-201ENST00000341290 KIF11P52732 1056 aa16.94■□□□□ 0.3
PERM1-201ENST00000341290 SF3B3Q15393 1217 aaKnown RBP16.94■□□□□ 0.3
PERM1-201ENST00000341290 AARSP49588 968 aaKnown RBP eCLIP16.93■□□□□ 0.3
PERM1-201ENST00000341290 APBA1Q02410 837 aa16.93■□□□□ 0.3
PERM1-201ENST00000341290 GFPT1Q06210 699 aaPredicted RBP16.93■□□□□ 0.3
PERM1-201ENST00000341290 SETDB2Q96T68 719 aa16.93■□□□□ 0.3
PERM1-201ENST00000341290 SNX12Q9UMY4 172 aa16.93■□□□□ 0.3
PERM1-201ENST00000341290 BICDL2A1A5D9 508 aa16.93■□□□□ 0.3
PERM1-201ENST00000341290 GOLGA6CA6NDK9 693 aa16.93■□□□□ 0.3
PERM1-201ENST00000341290 LRRC53A6NM62 1247 aa16.93■□□□□ 0.3
PERM1-201ENST00000341290 CLGNO14967 610 aa16.93■□□□□ 0.3
PERM1-201ENST00000341290 GOLGA6DP0CG33 693 aa16.93■□□□□ 0.3
PERM1-201ENST00000341290 DGKHQ86XP1 1220 aa16.93■□□□□ 0.3
PERM1-201ENST00000341290 CCDC170Q8IYT3 715 aa16.93■□□□□ 0.3
PERM1-201ENST00000341290 MSL3Q8N5Y2 521 aaKnown RBP16.93■□□□□ 0.3
PERM1-201ENST00000341290 TBCKQ8TEA7 893 aa16.93■□□□□ 0.3
PERM1-201ENST00000341290 CCDC47Q96A33 483 aaKnown RBP16.93■□□□□ 0.3
PERM1-201ENST00000341290 SGIP1Q9BQI5 828 aa16.93■□□□□ 0.3
PERM1-201ENST00000341290 NUP58Q9BVL2 599 aa16.93■□□□□ 0.3
PERM1-201ENST00000341290 NLRC4Q9NPP4 1024 aa16.93■□□□□ 0.3
PERM1-201ENST00000341290 GOLGA6AQ9NYA3 693 aa16.93■□□□□ 0.3
PERM1-201ENST00000341290 RASSF7Q02833 373 aa16.92■□□□□ 0.3
PERM1-201ENST00000341290 MMTAG2Q9BU76 263 aaKnown RBP16.92■□□□□ 0.3
PERM1-201ENST00000341290 VIPAS39Q9H9C1 493 aa16.92■□□□□ 0.3
PERM1-201ENST00000341290 SH3GLB2Q9NR46 395 aa16.92■□□□□ 0.3
PERM1-201ENST00000341290 CCDC181Q5TID7 509 aa16.92■□□□□ 0.3
PERM1-201ENST00000341290 SPATA4Q8NEY3 305 aa16.92■□□□□ 0.3
PERM1-201ENST00000341290 KCNG1Q9UIX4 513 aa16.92■□□□□ 0.3
PERM1-201ENST00000341290 ESYT3A0FGR9 886 aa16.91■□□□□ 0.3
PERM1-201ENST00000341290 TARSL2A2RTX5 802 aaKnown RBP16.91■□□□□ 0.3
PERM1-201ENST00000341290 POTEMA6NI47 508 aa16.91■□□□□ 0.3
PERM1-201ENST00000341290 TACC1O75410 805 aa16.91■□□□□ 0.3
PERM1-201ENST00000341290 MCM3P25205 808 aa16.91■□□□□ 0.3
PERM1-201ENST00000341290 BRD2P25440 801 aaKnown RBP16.91■□□□□ 0.3
PERM1-201ENST00000341290 ARID5AQ03989 594 aa16.91■□□□□ 0.3
PERM1-201ENST00000341290 SBK1Q52WX2 424 aa16.91■□□□□ 0.3
PERM1-201ENST00000341290 FAM76AQ8TAV0 307 aa16.91■□□□□ 0.3
PERM1-201ENST00000341290 NDST4Q9H3R1 872 aa16.91■□□□□ 0.3
PERM1-201ENST00000341290 TBC1D7Q9P0N9 293 aa16.91■□□□□ 0.3
PERM1-201ENST00000341290 ANKIB1Q9P2G1 1089 aa16.91■□□□□ 0.3
PERM1-201ENST00000341290 MYMKA6NI61 221 aa16.91■□□□□ 0.3
PERM1-201ENST00000341290 USO1O60763 962 aaKnown RBP16.91■□□□□ 0.3
PERM1-201ENST00000341290 CCT5P48643 541 aa16.91■□□□□ 0.3
PERM1-201ENST00000341290 NONOQ15233 471 aaKnown RBP eCLIP16.91■□□□□ 0.3
PERM1-201ENST00000341290 CRY2Q49AN0 593 aa16.91■□□□□ 0.3
PERM1-201ENST00000341290 PIGSQ96S52 555 aa16.91■□□□□ 0.3
PERM1-201ENST00000341290 OSBPL9Q96SU4 736 aa16.91■□□□□ 0.3
PERM1-201ENST00000341290 ARFGEF1Q9Y6D6 1849 aa16.91■□□□□ 0.3
PERM1-201ENST00000341290 PTPROQ16827 1216 aa16.91■□□□□ 0.3
PERM1-201ENST00000341290 VWA3BQ502W6 1294 aa16.91■□□□□ 0.3
PERM1-201ENST00000341290 TDRD12Q587J7 1177 aaKnown RBP16.91■□□□□ 0.3
PERM1-201ENST00000341290 KCTD16Q68DU8 428 aa16.91■□□□□ 0.3
PERM1-201ENST00000341290 FAM114A1Q8IWE2 563 aa16.91■□□□□ 0.3
PERM1-201ENST00000341290 NOC3LQ8WTT2 800 aaKnown RBP16.91■□□□□ 0.3
PERM1-201ENST00000341290 NUDT12Q9BQG2 462 aa16.91■□□□□ 0.3
PERM1-201ENST00000341290 SH2D4AQ9H788 454 aa16.91■□□□□ 0.3
PERM1-201ENST00000341290 FRMPD2Q68DX3 1309 aaPredicted RBP16.9■□□□□ 0.3
PERM1-201ENST00000341290 ZSCAN5CA6NGD5 496 aaPredicted RBP16.9■□□□□ 0.3
PERM1-201ENST00000341290 LDHBP07195 334 aaKnown RBP16.9■□□□□ 0.3
PERM1-201ENST00000341290 EIF6P56537 245 aaKnown RBP16.9■□□□□ 0.3
PERM1-201ENST00000341290 NBPF5PQ86XG9 351 aaPredicted RBP16.9■□□□□ 0.3
PERM1-201ENST00000341290 TSEN2Q8NCE0 465 aaKnown RBP16.9■□□□□ 0.3
PERM1-201ENST00000341290 PURBQ96QR8 312 aaKnown RBP16.9■□□□□ 0.3
PERM1-201ENST00000341290 MKRN1Q9UHC7 482 aaKnown RBP16.9■□□□□ 0.3
PERM1-201ENST00000341290 SLC1A4P43007 532 aa16.9■□□□□ 0.3
PERM1-201ENST00000341290 CCDC70Q6NSX1 233 aa16.9■□□□□ 0.3
PERM1-201ENST00000341290 TPTE2Q6XPS3 522 aa16.9■□□□□ 0.3
PERM1-201ENST00000341290 NEK8Q86SG6 692 aa16.9■□□□□ 0.3
PERM1-201ENST00000341290 RETREG2Q8NC44 543 aa16.9■□□□□ 0.3
PERM1-201ENST00000341290 TRIM58Q8NG06 486 aa16.9■□□□□ 0.3
PERM1-201ENST00000341290 NLRP3Q96P20 1036 aa16.9■□□□□ 0.3
PERM1-201ENST00000341290 FAM184BQ9ULE4 1060 aa16.9■□□□□ 0.3
PERM1-201ENST00000341290 PACSIN2Q9UNF0 486 aaPredicted RBP16.9■□□□□ 0.3
PERM1-201ENST00000341290 ANO9A1A5B4 782 aa16.89■□□□□ 0.29
PERM1-201ENST00000341290 PPFIA4O75335 1185 aa16.89■□□□□ 0.29
PERM1-201ENST00000341290 RPS6KA5O75582 802 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms