RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 FTOQ9C0B1 505 aaKnown RBP eCLIP28.07■■■□□ 2.08
SSBP4-201ENST00000270061 BAZ2BQ9UIF8 2168 aaKnown RBP28.07■■■□□ 2.08
SSBP4-201ENST00000270061 BTBD18B2RXH4 712 aa28.06■■■□□ 2.08
SSBP4-201ENST00000270061 AKR1A1P14550 325 aa28.06■■■□□ 2.08
SSBP4-201ENST00000270061 ARMCX2Q7L311 632 aa28.06■■■□□ 2.08
SSBP4-201ENST00000270061 ADGRF4Q8IZF3 695 aa28.06■■■□□ 2.08
SSBP4-201ENST00000270061 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.06■■■□□ 2.08
SSBP4-201ENST00000270061 ZHX1Q9UKY1 873 aaPredicted RBP28.06■■■□□ 2.08
SSBP4-201ENST00000270061 CEBPZQ03701 1054 aaKnown RBP28.06■■■□□ 2.08
SSBP4-201ENST00000270061 FAM177A1Q8N128 213 aaPredicted RBP28.06■■■□□ 2.08
SSBP4-201ENST00000270061 ABHD16BQ9H3Z7 469 aa28.06■■■□□ 2.08
SSBP4-201ENST00000270061 SH3GLB2Q9NR46 395 aa28.06■■■□□ 2.08
SSBP4-201ENST00000270061 VPS54Q9P1Q0 977 aa28.06■■■□□ 2.08
SSBP4-201ENST00000270061 RANBP2P49792 3224 aaKnown RBP28.05■■■□□ 2.08
SSBP4-201ENST00000270061 KLRF2D3W0D1 207 aa28.05■■■□□ 2.08
SSBP4-201ENST00000270061 NFIBO00712 420 aa28.05■■■□□ 2.08
SSBP4-201ENST00000270061 GJC2Q5T442 439 aaPredicted RBP28.05■■■□□ 2.08
SSBP4-201ENST00000270061 CCDC183Q5T5S1 534 aa28.05■■■□□ 2.08
SSBP4-201ENST00000270061 KCNG4Q8TDN1 519 aa28.05■■■□□ 2.08
SSBP4-201ENST00000270061 CLIC4Q9Y696 253 aa28.05■■■□□ 2.08
SSBP4-201ENST00000270061 hCG_1642624A0A1W2PR95 340 aa28.04■■■□□ 2.08
SSBP4-201ENST00000270061 SOWAHBA6NEL2 793 aa28.04■■■□□ 2.08
SSBP4-201ENST00000270061 GOLGA6L3A6NEY3 463 aa28.04■■■□□ 2.08
SSBP4-201ENST00000270061 MYCNP04198 464 aaPredicted RBP28.04■■■□□ 2.08
SSBP4-201ENST00000270061 ACVR2BQ13705 512 aa28.04■■■□□ 2.08
SSBP4-201ENST00000270061 CDC37Q16543 378 aaPredicted RBP28.04■■■□□ 2.08
SSBP4-201ENST00000270061 XPNPEP3Q9NQH7 507 aa28.04■■■□□ 2.08
SSBP4-201ENST00000270061 KBTBD13C9JR72 458 aa28.04■■■□□ 2.08
SSBP4-201ENST00000270061 CYTH3O43739 400 aa28.04■■■□□ 2.08
SSBP4-201ENST00000270061 SLC35G1Q2M3R5 365 aa28.04■■■□□ 2.08
SSBP4-201ENST00000270061 USH1GQ495M9 461 aa28.04■■■□□ 2.08
SSBP4-201ENST00000270061 SENP6Q9GZR1 1112 aaPredicted RBP28.04■■■□□ 2.08
SSBP4-201ENST00000270061 FAM184BQ9ULE4 1060 aa28.04■■■□□ 2.08
SSBP4-201ENST00000270061 ASB14A6NK59 587 aa28.03■■■□□ 2.08
SSBP4-201ENST00000270061 LETM1O95202 739 aaPredicted RBP28.03■■■□□ 2.08
SSBP4-201ENST00000270061 BAATQ14032 418 aaPredicted RBP28.03■■■□□ 2.08
SSBP4-201ENST00000270061 CLEC4DQ8WXI8 215 aa28.03■■■□□ 2.08
SSBP4-201ENST00000270061 KRT2P35908 639 aa28.02■■■□□ 2.08
SSBP4-201ENST00000270061 STK38Q15208 465 aa28.02■■■□□ 2.08
SSBP4-201ENST00000270061 VAT1LQ9HCJ6 419 aa28.02■■■□□ 2.08
SSBP4-201ENST00000270061 BRMS1Q9HCU9 246 aa28.02■■■□□ 2.08
SSBP4-201ENST00000270061 SLC39A14Q15043 492 aa28.01■■■□□ 2.08
SSBP4-201ENST00000270061 LRRC41Q15345 812 aa28.01■■■□□ 2.08
SSBP4-201ENST00000270061 JMJD4Q9H9V9 463 aa28.01■■■□□ 2.08
SSBP4-201ENST00000270061 ASTN1O14525 1302 aa28.01■■■□□ 2.07
SSBP4-201ENST00000270061 NPY5RQ15761 445 aa28.01■■■□□ 2.07
SSBP4-201ENST00000270061 RILPL1Q5EBL4 403 aa28.01■■■□□ 2.07
SSBP4-201ENST00000270061 L1TD1Q5T7N2 865 aaKnown RBP28.01■■■□□ 2.07
SSBP4-201ENST00000270061 RNF207Q6ZRF8 634 aa28.01■■■□□ 2.07
SSBP4-201ENST00000270061 ADD3Q9UEY8 706 aaKnown RBP28.01■■■□□ 2.07
SSBP4-201ENST00000270061 SPTLC2O15270 562 aa28■■■□□ 2.07
SSBP4-201ENST00000270061 QRICH1Q2TAL8 776 aa28■■■□□ 2.07
SSBP4-201ENST00000270061 ADALQ6DHV7 355 aa28■■■□□ 2.07
SSBP4-201ENST00000270061 GAS2L3Q86XJ1 694 aa28■■■□□ 2.07
SSBP4-201ENST00000270061 C7orf61Q8IZ16 206 aa28■■■□□ 2.07
SSBP4-201ENST00000270061 OXER1Q8TDS5 423 aa28■■■□□ 2.07
SSBP4-201ENST00000270061 LENG1Q96BZ8 264 aaPredicted RBP28■■■□□ 2.07
SSBP4-201ENST00000270061 PURBQ96QR8 312 aaKnown RBP28■■■□□ 2.07
SSBP4-201ENST00000270061 RIOX1Q9H6W3 641 aa28■■■□□ 2.07
SSBP4-201ENST00000270061 LRRC37A2A6NM11 1700 aa28■■■□□ 2.07
SSBP4-201ENST00000270061 PGK1P00558 417 aa27.99■■■□□ 2.07
SSBP4-201ENST00000270061 LIG1P18858 919 aa27.99■■■□□ 2.07
SSBP4-201ENST00000270061 NR5A1Q13285 461 aa27.99■■■□□ 2.07
SSBP4-201ENST00000270061 CCDC144BQ3MJ40 725 aa27.99■■■□□ 2.07
SSBP4-201ENST00000270061 LRSAM1Q6UWE0 723 aa27.99■■■□□ 2.07
SSBP4-201ENST00000270061 RNF180Q86T96 592 aa27.99■■■□□ 2.07
SSBP4-201ENST00000270061 PCDHA7Q9UN72 937 aa27.99■■■□□ 2.07
SSBP4-201ENST00000270061 TRIOBPQ9H2D6 2365 aa27.99■■■□□ 2.07
SSBP4-201ENST00000270061 ABCB11O95342 1321 aa27.99■■■□□ 2.07
SSBP4-201ENST00000270061 A0A1W2PQ27 194 aa27.99■■■□□ 2.07
SSBP4-201ENST00000270061 A0A1W2PQ64 194 aa27.99■■■□□ 2.07
SSBP4-201ENST00000270061 A0A1W2PQD8 194 aa27.99■■■□□ 2.07
SSBP4-201ENST00000270061 CALML3P27482 149 aa27.99■■■□□ 2.07
SSBP4-201ENST00000270061 ME1P48163 572 aa27.99■■■□□ 2.07
SSBP4-201ENST00000270061 SF3A1Q15459 793 aaKnown RBP27.99■■■□□ 2.07
SSBP4-201ENST00000270061 LRRC26Q2I0M4 334 aa27.99■■■□□ 2.07
SSBP4-201ENST00000270061 SLC30A10Q6XR72 485 aa27.99■■■□□ 2.07
SSBP4-201ENST00000270061 BICD2Q8TD16 824 aa27.99■■■□□ 2.07
SSBP4-201ENST00000270061 TNFRSF25Q93038 417 aa27.99■■■□□ 2.07
SSBP4-201ENST00000270061 KATNBL1Q9H079 304 aa27.99■■■□□ 2.07
SSBP4-201ENST00000270061 SYCE3A1L190 88 aa27.98■■■□□ 2.07
SSBP4-201ENST00000270061 PPP6R2O75170 966 aa27.98■■■□□ 2.07
SSBP4-201ENST00000270061 RPS6P62753 249 aaKnown RBP27.98■■■□□ 2.07
SSBP4-201ENST00000270061 PTPAQ15257 358 aa27.98■■■□□ 2.07
SSBP4-201ENST00000270061 FBXO11Q86XK2 927 aa27.98■■■□□ 2.07
SSBP4-201ENST00000270061 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.98■■■□□ 2.07
SSBP4-201ENST00000270061 DDX19AQ9NUU7 478 aaKnown RBP27.98■■■□□ 2.07
SSBP4-201ENST00000270061 DUSP11O75319 330 aaKnown RBP27.97■■■□□ 2.07
SSBP4-201ENST00000270061 TOB1P50616 345 aaPredicted RBP27.97■■■□□ 2.07
SSBP4-201ENST00000270061 NLRP5P59047 1200 aa27.97■■■□□ 2.07
SSBP4-201ENST00000270061 TPRNQ4KMQ1 711 aa27.97■■■□□ 2.07
SSBP4-201ENST00000270061 GALNT17Q6IS24 598 aa27.97■■■□□ 2.07
SSBP4-201ENST00000270061 BARHL2Q9NY43 387 aa27.97■■■□□ 2.07
SSBP4-201ENST00000270061 ALDH5A1P51649 535 aaPredicted RBP27.96■■■□□ 2.07
SSBP4-201ENST00000270061 ATN1P54259 1190 aaPredicted RBP27.96■■■□□ 2.07
SSBP4-201ENST00000270061 RRP36Q96EU6 259 aaKnown RBP27.96■■■□□ 2.07
SSBP4-201ENST00000270061 SYNRGQ9UMZ2 1314 aa27.96■■■□□ 2.07
SSBP4-201ENST00000270061 ADAMTS4O75173 837 aa27.96■■■□□ 2.07
SSBP4-201ENST00000270061 CCDC148Q8NFR7 591 aa27.96■■■□□ 2.07
SSBP4-201ENST00000270061 PIBF1Q8WXW3 757 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms