RNA–Protein interactions for RNA: ENSMUST00000047697.11

Trim17-201, Transcript of E3 ubiquitin-protein ligase TRIM17, mousemouse

TSL 2 BASIC

Gene Trim17, Length 3,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17-201ENSMUST00000047697 Sf3b2Q3UJB0 878 aaKnown RBP11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 Rc3h1Q4VGL6 1130 aaKnown RBP11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 Arhgap44Q5SSM3 814 aa11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 EregQ61521 162 aa11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 Lrrc15Q80X72 579 aa11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 Efcab14Q8BGQ6 484 aa11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 HibadhQ99L13 335 aaKnown RBP11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 Arl2bpQ9D385 163 aa11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 Mad2l2Q9D752 211 aa11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 Ascc1Q9D8Z1 356 aaKnown RBP11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 Capn12Q9ER56 720 aa11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 Prpf40aQ9R1C7 953 aaKnown RBP11.38□□□□□ -0.59
Trim17-201ENSMUST00000047697 E9QMW4 1145 aa11.37□□□□□ -0.59
Trim17-201ENSMUST00000047697 Cpsf2O35218 782 aaKnown RBP11.37□□□□□ -0.59
Trim17-201ENSMUST00000047697 Gap43P06837 227 aa11.37□□□□□ -0.59
Trim17-201ENSMUST00000047697 GscQ02591 256 aa11.37□□□□□ -0.59
Trim17-201ENSMUST00000047697 Tmtc1Q3UV71 942 aa11.37□□□□□ -0.59
Trim17-201ENSMUST00000047697 GartQ64737 1010 aa11.37□□□□□ -0.59
Trim17-201ENSMUST00000047697 Znf280dQ68FE8 974 aa11.37□□□□□ -0.59
Trim17-201ENSMUST00000047697 Zfp446Q8C9M8 523 aa11.37□□□□□ -0.59
Trim17-201ENSMUST00000047697 SncbQ91ZZ3 133 aa11.37□□□□□ -0.59
Trim17-201ENSMUST00000047697 CoasyQ9DBL7 563 aa11.37□□□□□ -0.59
Trim17-201ENSMUST00000047697 Acot3Q9QYR7 432 aa11.37□□□□□ -0.59
Trim17-201ENSMUST00000047697 Ccdc33Q3ULW6 985 aa11.37□□□□□ -0.59
Trim17-201ENSMUST00000047697 Baiap3Q80TT2 1134 aa11.37□□□□□ -0.59
Trim17-201ENSMUST00000047697 Hps4Q99KG7 671 aa11.37□□□□□ -0.59
Trim17-201ENSMUST00000047697 Capn9Q9D805 690 aa11.37□□□□□ -0.59
Trim17-201ENSMUST00000047697 MefvQ9JJ26 767 aa11.37□□□□□ -0.59
Trim17-201ENSMUST00000047697 Hnrnph1O35737 449 aaKnown RBP11.37□□□□□ -0.59
Trim17-201ENSMUST00000047697 Krt18P05784 423 aa11.37□□□□□ -0.59
Trim17-201ENSMUST00000047697 Akr1b1P45376 316 aa11.37□□□□□ -0.59
Trim17-201ENSMUST00000047697 Polr2fP61219 127 aa11.37□□□□□ -0.59
Trim17-201ENSMUST00000047697 Irx1P81068 480 aa11.37□□□□□ -0.59
Trim17-201ENSMUST00000047697 Drc1Q3USS3 753 aa11.37□□□□□ -0.59
Trim17-201ENSMUST00000047697 Gm5169Q5M8P2 212 aa11.37□□□□□ -0.59
Trim17-201ENSMUST00000047697 Fam183bQ5NC57 135 aa11.37□□□□□ -0.59
Trim17-201ENSMUST00000047697 Jade3Q6IE82 823 aa11.37□□□□□ -0.59
Trim17-201ENSMUST00000047697 Zdhhc14Q8BQQ1 489 aa11.37□□□□□ -0.59
Trim17-201ENSMUST00000047697 Morc2bQ8C5W4 1022 aa11.37□□□□□ -0.59
Trim17-201ENSMUST00000047697 Calml4Q91WQ9 153 aa11.37□□□□□ -0.59
Trim17-201ENSMUST00000047697 Fam133bQ9CVI2 245 aaKnown RBP11.37□□□□□ -0.59
Trim17-201ENSMUST00000047697 3830403N18RikQ9D6C3 208 aa11.37□□□□□ -0.59
Trim17-201ENSMUST00000047697 Xrcc6P23475 608 aa11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 PtgdrP70263 357 aa11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Nhej1Q3KNJ2 295 aa11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Lrrc55Q3UY51 311 aa11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Lrrc36Q3V0M2 755 aa11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 SltmQ8CH25 1031 aaKnown RBP11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 McamQ8R2Y2 648 aaKnown RBP11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Rhobtb3Q9CTN4 611 aa11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Slc40a1Q9JHI9 570 aa11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Cetn3O35648 167 aa11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Copb2O55029 905 aa11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Hsd17b1P51656 344 aa11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Eef2P58252 858 aaKnown RBP11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Tmprss11aQ3UQ41 389 aa11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 WhrnQ80VW5 918 aa11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Gpcpd1Q8C0L9 675 aa11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Lgi2Q8K4Z0 550 aa11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Alg1Q921Q3 482 aa11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Calr3Q9D9Q6 380 aa11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Trmt112Q9DCG9 125 aa11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Sertad1Q9JL10 236 aa11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Siglec1Q62230 1695 aa11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Pabpc1lA2A5N3 607 aaKnown RBP11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Ptpn12P35831 775 aa11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Hnrnph2P70333 449 aaKnown RBP11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Gjb6P70689 261 aa11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Nsrp1Q5NCR9 542 aa11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Ddx3xQ62167 662 aaKnown RBP11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Skor1Q8BX46 964 aa11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Prl7b1Q8CGZ9 251 aa11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Commd10Q8JZY2 202 aa11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Slc35f6Q8VE96 372 aa11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Synpo2Q91YE8 1087 aaKnown RBP11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Kctd10Q922M3 315 aa11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Dph5Q9CWQ0 281 aa11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Nap1l5Q9JJF0 156 aa11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 DexiQ9WUQ7 95 aa11.36□□□□□ -0.59
Trim17-201ENSMUST00000047697 Abca3Q8R420 1704 aa11.35□□□□□ -0.59
Trim17-201ENSMUST00000047697 Aox3G3X982 1335 aa11.35□□□□□ -0.59
Trim17-201ENSMUST00000047697 Ercc5P35689 1170 aa11.35□□□□□ -0.59
Trim17-201ENSMUST00000047697 Stat4P42228 749 aa11.35□□□□□ -0.59
Trim17-201ENSMUST00000047697 Sap30bpQ02614 308 aa11.35□□□□□ -0.59
Trim17-201ENSMUST00000047697 Cacna2d4Q5RJF7 1116 aa11.35□□□□□ -0.59
Trim17-201ENSMUST00000047697 Igf2bp2Q5SF07 592 aaKnown RBP11.35□□□□□ -0.59
Trim17-201ENSMUST00000047697 Krt15Q61414 452 aa11.35□□□□□ -0.59
Trim17-201ENSMUST00000047697 Pacsin1Q61644 441 aa11.35□□□□□ -0.59
Trim17-201ENSMUST00000047697 CgasQ8C6L5 507 aa11.35□□□□□ -0.59
Trim17-201ENSMUST00000047697 Gramd4Q8CB44 633 aa11.35□□□□□ -0.59
Trim17-201ENSMUST00000047697 Trap1Q9CQN1 706 aaKnown RBP11.35□□□□□ -0.59
Trim17-201ENSMUST00000047697 4930449I24RikQ9D5E3 319 aa11.35□□□□□ -0.59
Trim17-201ENSMUST00000047697 Gm45208A0A140LJ36 292 aa11.35□□□□□ -0.59
Trim17-201ENSMUST00000047697 1700016G14RikA0A286YCZ6 238 aa11.35□□□□□ -0.59
Trim17-201ENSMUST00000047697 Nova2D3YVV7 556 aaKnown RBP11.35□□□□□ -0.59
Trim17-201ENSMUST00000047697 Rsbn1lD3Z0K6 821 aa11.35□□□□□ -0.59
Trim17-201ENSMUST00000047697 PurbO35295 324 aaKnown RBP11.35□□□□□ -0.59
Trim17-201ENSMUST00000047697 Atp1b3P97370 278 aa11.35□□□□□ -0.59
Trim17-201ENSMUST00000047697 Git1Q68FF6 770 aa11.35□□□□□ -0.59
Trim17-201ENSMUST00000047697 Krt87Q6IMF0 495 aa11.35□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 34.3 ms